| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157960857
Identifier: 157960857
GI number: 157960857
Start: 1252198
End: 1252614
Strand: Direct
Name: 157960857
Synonym: Spea_1029
Alternate gene names: NA
Gene position: 1252198-1252614 (Clockwise)
Preceding gene: 157960856
Following gene: 157960859
Centisome position: 24.2
GC content: 43.41
Gene sequence:
>417_bases GTGGACGTCCAGCAGCATAGCTTCGATCTGATTTCTTCCAACGGTCAGCGACTCTCTCTGACCGTTATTGCCCTTATCTG TTTAAGCTCTTTCCTTATTTGGCCTTACGCTGAAAATACCGTTTATATCTTGCTCAAATTTCTATTATTCAGTGCCTGCT GTACCTTTTTTATTTGGCAGATTTATCGATTAAAGCACTGGCGATGCCAGTTTGTACTTAAGGCAGATGGAGGAGGCCGA TTTAAATATGGGACCGACTTTGTTTTACAGGGGAAGCCTGTCATTACACCATTTGCGGTGATGTTTGATGTCACTTTTGC GGGAGGAAAGAAAAGACTCGTACTATGGGCGGATATGTTAGACGACACAAACTATCGACATCTGTGTCGTCTATTGCAGT TAGCTAGTCAGAGGTGA
Upstream 100 bases:
>100_bases GTGAGATTACTCGAATGCGAAGATCCAGAATTGTTTGCTTGGTTTATGGGACATGAGCAGTGCCCAAATCCTGCGTTTGC CGAAATGATAATCAAGGTTC
Downstream 100 bases:
>100_bases AAGACTAACTATTCTCGTTAAAAACAGTTGTTAACCAAAGGGCTAATCTGGCTGTAGCTAATCAGGTTGTAATATGGTTG GCTTTGGTGATTCATCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MDVQQHSFDLISSNGQRLSLTVIALICLSSFLIWPYAENTVYILLKFLLFSACCTFFIWQIYRLKHWRCQFVLKADGGGR FKYGTDFVLQGKPVITPFAVMFDVTFAGGKKRLVLWADMLDDTNYRHLCRLLQLASQR
Sequences:
>Translated_138_residues MDVQQHSFDLISSNGQRLSLTVIALICLSSFLIWPYAENTVYILLKFLLFSACCTFFIWQIYRLKHWRCQFVLKADGGGR FKYGTDFVLQGKPVITPFAVMFDVTFAGGKKRLVLWADMLDDTNYRHLCRLLQLASQR >Mature_138_residues MDVQQHSFDLISSNGQRLSLTVIALICLSSFLIWPYAENTVYILLKFLLFSACCTFFIWQIYRLKHWRCQFVLKADGGGR FKYGTDFVLQGKPVITPFAVMFDVTFAGGKKRLVLWADMLDDTNYRHLCRLLQLASQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16011; Mature: 16011
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVQQHSFDLISSNGQRLSLTVIALICLSSFLIWPYAENTVYILLKFLLFSACCTFFIWQ CCCCCCCHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH IYRLKHWRCQFVLKADGGGRFKYGTDFVLQGKPVITPFAVMFDVTFAGGKKRLVLWADML HHHHCCCEEEEEEEECCCCCEECCCCEEEECCCCCCHHHHEEEEEECCCCEEEEEEEECC DDTNYRHLCRLLQLASQR CCCCHHHHHHHHHHHCCC >Mature Secondary Structure MDVQQHSFDLISSNGQRLSLTVIALICLSSFLIWPYAENTVYILLKFLLFSACCTFFIWQ CCCCCCCHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH IYRLKHWRCQFVLKADGGGRFKYGTDFVLQGKPVITPFAVMFDVTFAGGKKRLVLWADML HHHHCCCEEEEEEEECCCCCEECCCCEEEECCCCCCHHHHEEEEEECCCCEEEEEEEECC DDTNYRHLCRLLQLASQR CCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA