Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960857

Identifier: 157960857

GI number: 157960857

Start: 1252198

End: 1252614

Strand: Direct

Name: 157960857

Synonym: Spea_1029

Alternate gene names: NA

Gene position: 1252198-1252614 (Clockwise)

Preceding gene: 157960856

Following gene: 157960859

Centisome position: 24.2

GC content: 43.41

Gene sequence:

>417_bases
GTGGACGTCCAGCAGCATAGCTTCGATCTGATTTCTTCCAACGGTCAGCGACTCTCTCTGACCGTTATTGCCCTTATCTG
TTTAAGCTCTTTCCTTATTTGGCCTTACGCTGAAAATACCGTTTATATCTTGCTCAAATTTCTATTATTCAGTGCCTGCT
GTACCTTTTTTATTTGGCAGATTTATCGATTAAAGCACTGGCGATGCCAGTTTGTACTTAAGGCAGATGGAGGAGGCCGA
TTTAAATATGGGACCGACTTTGTTTTACAGGGGAAGCCTGTCATTACACCATTTGCGGTGATGTTTGATGTCACTTTTGC
GGGAGGAAAGAAAAGACTCGTACTATGGGCGGATATGTTAGACGACACAAACTATCGACATCTGTGTCGTCTATTGCAGT
TAGCTAGTCAGAGGTGA

Upstream 100 bases:

>100_bases
GTGAGATTACTCGAATGCGAAGATCCAGAATTGTTTGCTTGGTTTATGGGACATGAGCAGTGCCCAAATCCTGCGTTTGC
CGAAATGATAATCAAGGTTC

Downstream 100 bases:

>100_bases
AAGACTAACTATTCTCGTTAAAAACAGTTGTTAACCAAAGGGCTAATCTGGCTGTAGCTAATCAGGTTGTAATATGGTTG
GCTTTGGTGATTCATCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MDVQQHSFDLISSNGQRLSLTVIALICLSSFLIWPYAENTVYILLKFLLFSACCTFFIWQIYRLKHWRCQFVLKADGGGR
FKYGTDFVLQGKPVITPFAVMFDVTFAGGKKRLVLWADMLDDTNYRHLCRLLQLASQR

Sequences:

>Translated_138_residues
MDVQQHSFDLISSNGQRLSLTVIALICLSSFLIWPYAENTVYILLKFLLFSACCTFFIWQIYRLKHWRCQFVLKADGGGR
FKYGTDFVLQGKPVITPFAVMFDVTFAGGKKRLVLWADMLDDTNYRHLCRLLQLASQR
>Mature_138_residues
MDVQQHSFDLISSNGQRLSLTVIALICLSSFLIWPYAENTVYILLKFLLFSACCTFFIWQIYRLKHWRCQFVLKADGGGR
FKYGTDFVLQGKPVITPFAVMFDVTFAGGKKRLVLWADMLDDTNYRHLCRLLQLASQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16011; Mature: 16011

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVQQHSFDLISSNGQRLSLTVIALICLSSFLIWPYAENTVYILLKFLLFSACCTFFIWQ
CCCCCCCHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IYRLKHWRCQFVLKADGGGRFKYGTDFVLQGKPVITPFAVMFDVTFAGGKKRLVLWADML
HHHHCCCEEEEEEEECCCCCEECCCCEEEECCCCCCHHHHEEEEEECCCCEEEEEEEECC
DDTNYRHLCRLLQLASQR
CCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MDVQQHSFDLISSNGQRLSLTVIALICLSSFLIWPYAENTVYILLKFLLFSACCTFFIWQ
CCCCCCCHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IYRLKHWRCQFVLKADGGGRFKYGTDFVLQGKPVITPFAVMFDVTFAGGKKRLVLWADML
HHHHCCCEEEEEEEECCCCCEECCCCEEEECCCCCCHHHHEEEEEECCCCEEEEEEEECC
DDTNYRHLCRLLQLASQR
CCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA