Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960854

Identifier: 157960854

GI number: 157960854

Start: 1250456

End: 1250839

Strand: Direct

Name: 157960854

Synonym: Spea_1026

Alternate gene names: NA

Gene position: 1250456-1250839 (Clockwise)

Preceding gene: 157960853

Following gene: 157960855

Centisome position: 24.17

GC content: 44.27

Gene sequence:

>384_bases
ATGAGAATCACATTATTAGCATTAGTTGTAGGACTGGGCTTTAGCTCAGTGGCATCGGCCAAGCAGATTGAGGTTTGTAA
TCAGGATATCAATAGCGTGGTATGCCAAAACTATCTTGAAGGCGTGGTTGATGGTGCTTTGATGTATAAAGGCGCTGCAG
TAGGCCAACGATTAGAGTCCGATGGCTATGAGTCTCGAGCGCTTAAATACCGTGGTGGTAAGCGTTTCCAGGAAGCAAAC
CGGACTTTTTGTCAGGATAACCTTCCTGACCGTGACGTACTTGTTGCTGGTCTAGCTGAATCATTTTCTGCCAACGAAAT
TAAAAATGTAGAAGATTTAGCCACCGCAATGTCAGGTTTATTGGACTGTCAGCGTCTTAAGTAA

Upstream 100 bases:

>100_bases
GAGATTATGCAAGATTAGGGATTTTATTGGGGTCAATAGCATCGGCAACCATAGGATATTTCTGGCTGTCTAAGGTGCTA
CCTGAAAAAGGAGCAAAAGC

Downstream 100 bases:

>100_bases
GTTAAACTAAATTAACGAGGCAACTGAATAAGTTGCCTCTTTTTTATTTATATAACAGTAGTATTTATCATGGCTAATCT
AAACTACAACCATCTCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MRITLLALVVGLGFSSVASAKQIEVCNQDINSVVCQNYLEGVVDGALMYKGAAVGQRLESDGYESRALKYRGGKRFQEAN
RTFCQDNLPDRDVLVAGLAESFSANEIKNVEDLATAMSGLLDCQRLK

Sequences:

>Translated_127_residues
MRITLLALVVGLGFSSVASAKQIEVCNQDINSVVCQNYLEGVVDGALMYKGAAVGQRLESDGYESRALKYRGGKRFQEAN
RTFCQDNLPDRDVLVAGLAESFSANEIKNVEDLATAMSGLLDCQRLK
>Mature_127_residues
MRITLLALVVGLGFSSVASAKQIEVCNQDINSVVCQNYLEGVVDGALMYKGAAVGQRLESDGYESRALKYRGGKRFQEAN
RTFCQDNLPDRDVLVAGLAESFSANEIKNVEDLATAMSGLLDCQRLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13809; Mature: 13809

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLLALVVGLGFSSVASAKQIEVCNQDINSVVCQNYLEGVVDGALMYKGAAVGQRLES
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DGYESRALKYRGGKRFQEANRTFCQDNLPDRDVLVAGLAESFSANEIKNVEDLATAMSGL
CCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHH
LDCQRLK
HHHHHCC
>Mature Secondary Structure
MRITLLALVVGLGFSSVASAKQIEVCNQDINSVVCQNYLEGVVDGALMYKGAAVGQRLES
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DGYESRALKYRGGKRFQEANRTFCQDNLPDRDVLVAGLAESFSANEIKNVEDLATAMSGL
CCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHH
LDCQRLK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA