| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is lpp [C]
Identifier: 157960798
GI number: 157960798
Start: 1180629
End: 1180895
Strand: Reverse
Name: lpp [C]
Synonym: Spea_0970
Alternate gene names: 157960798
Gene position: 1180895-1180629 (Counterclockwise)
Preceding gene: 157960799
Following gene: 157960792
Centisome position: 22.82
GC content: 43.82
Gene sequence:
>267_bases ATGAATAAAAAAGTACTTATGATTGCTGGTGTAGCAATGACTGCCCTACTAGGTGGCTGTGCAAACACTACTGCTCTTGA AGAAAGCGTTGCAAACCTAGGTAACAAAGTTGACCAGCTTTCAGCTGAAGTTAGCTCTCTAAAATCAGATCACGGCAAAA TGTCTGCTGACATCAACGATGCAAAAGCAGCTGCTATGGACGCTCAAGCTGAAGCTCAGCGTGCTAACGACCGTATCGAC AACGTAGCATCTTCTTACAAGAAGTAA
Upstream 100 bases:
>100_bases AAATGCATAGCAAAATATTTTCTCTGTGACATAATTAACCAGTTCAGTTGTGATGTGCAGCTGTACTTATTTAAACCAAC CTATCTAAAGGGAATTCCCG
Downstream 100 bases:
>100_bases TTACGTTTAGGATTTCAACCTATTATTCAATAGGTTAACTCCAAAGGCTTGGTTTCAAGTATTGCACTTGACCAAGCCTT TAATTTTTCCGCCACTGCCA
Product: major outer membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MNKKVLMIAGVAMTALLGGCANTTALEESVANLGNKVDQLSAEVSSLKSDHGKMSADINDAKAAAMDAQAEAQRANDRID NVASSYKK
Sequences:
>Translated_88_residues MNKKVLMIAGVAMTALLGGCANTTALEESVANLGNKVDQLSAEVSSLKSDHGKMSADINDAKAAAMDAQAEAQRANDRID NVASSYKK >Mature_88_residues MNKKVLMIAGVAMTALLGGCANTTALEESVANLGNKVDQLSAEVSSLKSDHGKMSADINDAKAAAMDAQAEAQRANDRID NVASSYKK
Specific function: Unknown
COG id: COG4238
COG function: function code M; Murein lipoprotein
Gene ontology:
Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9140; Mature: 9140
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKVLMIAGVAMTALLGGCANTTALEESVANLGNKVDQLSAEVSSLKSDHGKMSADIND CCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH AKAAAMDAQAEAQRANDRIDNVASSYKK HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKKVLMIAGVAMTALLGGCANTTALEESVANLGNKVDQLSAEVSSLKSDHGKMSADIND CCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH AKAAAMDAQAEAQRANDRIDNVASSYKK HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA