| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960758
Identifier: 157960758
GI number: 157960758
Start: 1138130
End: 1139047
Strand: Direct
Name: 157960758
Synonym: Spea_0930
Alternate gene names: NA
Gene position: 1138130-1139047 (Clockwise)
Preceding gene: 157960754
Following gene: 157960760
Centisome position: 21.99
GC content: 44.01
Gene sequence:
>918_bases GTGAATTATTTACAGACCTACCTTAAAGGTATGGCAATGGGCGCAGCGGATGTGGTGCCTGGTGTTTCCGGTGGTACTAT CGCCTTTATTACGGGTATCTTGGACCCACTACTGGAAAGCATTAAAAAAATTAGACCCTCTTTACTGGGCGTGATTAAAG AGAACGGAGTTAAAGCGGCCTTTATGCATATTAATGGTCCGTTTTTAGTCTGTGTGTTTGGTGGTATTTTGACCAGTATT TTAACTTTGGCTAAGTTGATTACTTATCTGTTGGAGAATCACCCTATTCCAGTATGGTCGTTCTTTTTTGGTCTTATCTT GATCTCGGTCATTCATATGCTCAAGCAAGTTAAGGGCTTTACACTTGGGCGTATAGCCTTATTTGCCTTGGGAGTCGTGT TTGCTTGGGGCATTACCATGTTAAACCCGATTGCGGTTGAGATGACCTATCTGAATGTGTTCTTGGGCGGCTGTATTGCC ATTACCGCGATGATCTTACCTGGCATTTCGGGTAGCTTTATCTTGCTGTTACTTGGCTTATATACCCCAGTGATTGGCGC GGTTAAGAATTTTGACCTCGCAATTATGGCTACCTTTGCCGCTGGTGCCGCTATCGGCATACTCTGCTTTAGCCACGTAT TGTCAGCACTGCTAAGAAAGTATCACGATGCGACATTGATGTTTTTAATTGGCTTGATGCTTGGAACATTAGGCAAGATC TGGCCTTGGAAAGAGGTGCTAACTTTTCGTGAAAACTCAAAAGGCGAAATGGTACCACTCGATGAGCGCGTGTTATCGCC CCTGCAGTATGAGCATATAACCGGTCAGCCTTCATTGCTAATGTATGCGGTTACCGCCATGTTTGCCGGTATTTTATTAG TATGGGGCTTAGAGCGATTTGCTAATAAAACACGTTAA
Upstream 100 bases:
>100_bases GTTAATTTAGCTTTATAAAAGTAAACTTCATTTCCTTTTTGATTGTAATGGAACGTATAATTTTGGCCGACGAACAGTCT TGACCGAATTAAGGATTAAA
Downstream 100 bases:
>100_bases TTGATACCTTAAAAACAGATCTATCGAAAGCCAGCTTATTAGCTGGCTTTTTTTGGGTTGTAGCGGGAAGTAAGCAGGGC TATTGAGCATAGACCTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MNYLQTYLKGMAMGAADVVPGVSGGTIAFITGILDPLLESIKKIRPSLLGVIKENGVKAAFMHINGPFLVCVFGGILTSI LTLAKLITYLLENHPIPVWSFFFGLILISVIHMLKQVKGFTLGRIALFALGVVFAWGITMLNPIAVEMTYLNVFLGGCIA ITAMILPGISGSFILLLLGLYTPVIGAVKNFDLAIMATFAAGAAIGILCFSHVLSALLRKYHDATLMFLIGLMLGTLGKI WPWKEVLTFRENSKGEMVPLDERVLSPLQYEHITGQPSLLMYAVTAMFAGILLVWGLERFANKTR
Sequences:
>Translated_305_residues MNYLQTYLKGMAMGAADVVPGVSGGTIAFITGILDPLLESIKKIRPSLLGVIKENGVKAAFMHINGPFLVCVFGGILTSI LTLAKLITYLLENHPIPVWSFFFGLILISVIHMLKQVKGFTLGRIALFALGVVFAWGITMLNPIAVEMTYLNVFLGGCIA ITAMILPGISGSFILLLLGLYTPVIGAVKNFDLAIMATFAAGAAIGILCFSHVLSALLRKYHDATLMFLIGLMLGTLGKI WPWKEVLTFRENSKGEMVPLDERVLSPLQYEHITGQPSLLMYAVTAMFAGILLVWGLERFANKTR >Mature_305_residues MNYLQTYLKGMAMGAADVVPGVSGGTIAFITGILDPLLESIKKIRPSLLGVIKENGVKAAFMHINGPFLVCVFGGILTSI LTLAKLITYLLENHPIPVWSFFFGLILISVIHMLKQVKGFTLGRIALFALGVVFAWGITMLNPIAVEMTYLNVFLGGCIA ITAMILPGISGSFILLLLGLYTPVIGAVKNFDLAIMATFAAGAAIGILCFSHVLSALLRKYHDATLMFLIGLMLGTLGKI WPWKEVLTFRENSKGEMVPLDERVLSPLQYEHITGQPSLLMYAVTAMFAGILLVWGLERFANKTR
Specific function: Unknown
COG id: COG2035
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33153; Mature: 33153
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYLQTYLKGMAMGAADVVPGVSGGTIAFITGILDPLLESIKKIRPSLLGVIKENGVKAA CCHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE FMHINGPFLVCVFGGILTSILTLAKLITYLLENHPIPVWSFFFGLILISVIHMLKQVKGF EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC TLGRIALFALGVVFAWGITMLNPIAVEMTYLNVFLGGCIAITAMILPGISGSFILLLLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH YTPVIGAVKNFDLAIMATFAAGAAIGILCFSHVLSALLRKYHDATLMFLIGLMLGTLGKI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WPWKEVLTFRENSKGEMVPLDERVLSPLQYEHITGQPSLLMYAVTAMFAGILLVWGLERF CCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ANKTR HCCCC >Mature Secondary Structure MNYLQTYLKGMAMGAADVVPGVSGGTIAFITGILDPLLESIKKIRPSLLGVIKENGVKAA CCHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE FMHINGPFLVCVFGGILTSILTLAKLITYLLENHPIPVWSFFFGLILISVIHMLKQVKGF EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC TLGRIALFALGVVFAWGITMLNPIAVEMTYLNVFLGGCIAITAMILPGISGSFILLLLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH YTPVIGAVKNFDLAIMATFAAGAAIGILCFSHVLSALLRKYHDATLMFLIGLMLGTLGKI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WPWKEVLTFRENSKGEMVPLDERVLSPLQYEHITGQPSLLMYAVTAMFAGILLVWGLERF CCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ANKTR HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA