| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960754
Identifier: 157960754
GI number: 157960754
Start: 1134971
End: 1136320
Strand: Direct
Name: 157960754
Synonym: Spea_0926
Alternate gene names: NA
Gene position: 1134971-1136320 (Clockwise)
Preceding gene: 157960753
Following gene: 157960758
Centisome position: 21.93
GC content: 47.19
Gene sequence:
>1350_bases GTGAAGCAGGTTGAGCTGTTAGAGATACAGGTGACTCCGGCGGACGCTAGGGTCAATATTAATGAAAAGCAGCAATATAA AGCCCAAGCATTCTATAGTGATGGACACAGCGAAGATGTAACAAAAATTGCGACCTGGAACATAGATAACGACTCTGTTG CCAATGTGGTGCTCAGTGGCGAAAAGGCTGGCTTAGTAAGTGGCATTAGTCATGGCGAAGGGAATGTTATGGCAACCTTT GAATCCCATACCGGGAAAGCCAAGGTTAACGTTACAGATGTTGAATATTTAGGGATTAACATCGAGCCTGCTAACTCTTT AGTCGAGGTCGGGGCTTTTCAGCCGTTAACAGCGCTAGCAGTTTACCGTGATGCGGTTGGTGGTGTGAGATATAAAGATG TCACTTTACTGAGTGCCTGGCGTACTGAAAATCCCGAGATTGCGACAGTATCAGCAATAGGGGTCATTAAAGGTGAAGCG CAAGGCATGACGAATGTAGAAGCCTATTATCACGATCTCTACGGTGAAGCCCTGGTGAGTGTCGTTAACTCTCTGGTGAC CAAACTCACGGTCACGCCCGATAACTTATCGGCCCCTGTTGGCACTAAAGGGCGTTATCAGGCGATTGCTGCCTATATCG ATAGGCCCGATGAAGATGTAACTGAACTTGCAACTTGGTCTTCTAGTGATATTGATGTGGTGCATATCGTCACCTCGGGT ATTGATGGTGGAACAGCGAGTGCGAACAAAGTGGGCAGCAGTGAGATCAGTGCGCAATTTGAGGATATTGTTGATAGCGT AAATGTTCAGGTTACTGCGGCTGTGATAGAGCGAATAGAGATAACTCCACGAGTCGATACTGTTTACTTGGAGAATATAA CCCAGTTTTATGCCCACGCTTACTTCTCTGATGGAACCGTGCTAGATGTCACCTTAGACGCTAACTGGAAGAGTGATAGT CCCCAGATCGTCACGATCCAAACGGGGAGTTCGAGAGCAGGGCAGGCCATGGGAGTGAGCCAAGATGGAGCGGCCAGCAT TTCGGCAGATTACGCTGGATTTAGTGATAGTTTATCGCTTAAAGCTGTACCGAACATGCCTGAAAGTATCGAAATTATTC CAAATGAATTGACACTTAAAAACGGTGGCTATGCAGAGGTACAGGTGATGGTGACCTATAGTAATGGTGATGTGTATGAC TACGCTAAATATGTCGATTGGAGCTCAAGTGATGATAGCATCGCCTATGGCCATCAAGATGTGATTCGCGCCGAAGGTGT GGGTCACGCCACGGTGACAGCTACTATGGAAACGGTATCTGGTTCGGCAGAGGTAACCGTGACACCTTAA
Upstream 100 bases:
>100_bases TGCCGCTGTTGATGAGCAGGGAATTGCTTATACGATAAAACCGGGGCAGACCCAAATTCAAGCAGCGTTTTTAGGTGAAA TAGCTGCGACATCTCTGTTT
Downstream 100 bases:
>100_bases GCTTTTTTAAGCACAATTGACTCAGTTTAAACGAAAAAAGCAGCCGCTAATTTGGGCTGCTTTTTTTATTTGCTTTAGCT TAACACTGTGTTCAACTCTG
Product: Ig domain-containing protein
Products: NA
Alternate protein names: Ig Domain Domain Protein; Surface Protein; Ig Domain Protein Group 2 Domain Protein; Ig-Like Repeat-Containing Protein; Protein With A Bacterial Immunoglobulin-Like Domain; Peptidase S8 And; YVTN Beta-Propeller Repeat-Containing Protein; Ig-Like Domain-Containing Protein; LigB Lipoprotein; LigB-Like Protein; Subtilisin-Like Serine Protease; Extracellular Serine Protease; Ligc Protein
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MKQVELLEIQVTPADARVNINEKQQYKAQAFYSDGHSEDVTKIATWNIDNDSVANVVLSGEKAGLVSGISHGEGNVMATF ESHTGKAKVNVTDVEYLGINIEPANSLVEVGAFQPLTALAVYRDAVGGVRYKDVTLLSAWRTENPEIATVSAIGVIKGEA QGMTNVEAYYHDLYGEALVSVVNSLVTKLTVTPDNLSAPVGTKGRYQAIAAYIDRPDEDVTELATWSSSDIDVVHIVTSG IDGGTASANKVGSSEISAQFEDIVDSVNVQVTAAVIERIEITPRVDTVYLENITQFYAHAYFSDGTVLDVTLDANWKSDS PQIVTIQTGSSRAGQAMGVSQDGAASISADYAGFSDSLSLKAVPNMPESIEIIPNELTLKNGGYAEVQVMVTYSNGDVYD YAKYVDWSSSDDSIAYGHQDVIRAEGVGHATVTATMETVSGSAEVTVTP
Sequences:
>Translated_449_residues MKQVELLEIQVTPADARVNINEKQQYKAQAFYSDGHSEDVTKIATWNIDNDSVANVVLSGEKAGLVSGISHGEGNVMATF ESHTGKAKVNVTDVEYLGINIEPANSLVEVGAFQPLTALAVYRDAVGGVRYKDVTLLSAWRTENPEIATVSAIGVIKGEA QGMTNVEAYYHDLYGEALVSVVNSLVTKLTVTPDNLSAPVGTKGRYQAIAAYIDRPDEDVTELATWSSSDIDVVHIVTSG IDGGTASANKVGSSEISAQFEDIVDSVNVQVTAAVIERIEITPRVDTVYLENITQFYAHAYFSDGTVLDVTLDANWKSDS PQIVTIQTGSSRAGQAMGVSQDGAASISADYAGFSDSLSLKAVPNMPESIEIIPNELTLKNGGYAEVQVMVTYSNGDVYD YAKYVDWSSSDDSIAYGHQDVIRAEGVGHATVTATMETVSGSAEVTVTP >Mature_449_residues MKQVELLEIQVTPADARVNINEKQQYKAQAFYSDGHSEDVTKIATWNIDNDSVANVVLSGEKAGLVSGISHGEGNVMATF ESHTGKAKVNVTDVEYLGINIEPANSLVEVGAFQPLTALAVYRDAVGGVRYKDVTLLSAWRTENPEIATVSAIGVIKGEA QGMTNVEAYYHDLYGEALVSVVNSLVTKLTVTPDNLSAPVGTKGRYQAIAAYIDRPDEDVTELATWSSSDIDVVHIVTSG IDGGTASANKVGSSEISAQFEDIVDSVNVQVTAAVIERIEITPRVDTVYLENITQFYAHAYFSDGTVLDVTLDANWKSDS PQIVTIQTGSSRAGQAMGVSQDGAASISADYAGFSDSLSLKAVPNMPESIEIIPNELTLKNGGYAEVQVMVTYSNGDVYD YAKYVDWSSSDDSIAYGHQDVIRAEGVGHATVTATMETVSGSAEVTVTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47861; Mature: 47861
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQVELLEIQVTPADARVNINEKQQYKAQAFYSDGHSEDVTKIATWNIDNDSVANVVLSG CCCEEEEEEEEECCCCEEECCHHHHHEEHEEECCCCCCCCEEEEEEECCCCCEEEEEECC EKAGLVSGISHGEGNVMATFESHTGKAKVNVTDVEYLGINIEPANSLVEVGAFQPLTALA CCCCEEECCCCCCCCEEEEEECCCCEEEEEEEEEEEEEEEECCCCHHEECCCCCCHHHHH VYRDAVGGVRYKDVTLLSAWRTENPEIATVSAIGVIKGEAQGMTNVEAYYHDLYGEALVS HHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH VVNSLVTKLTVTPDNLSAPVGTKGRYQAIAAYIDRPDEDVTELATWSSSDIDVVHIVTSG HHHHHHHEEEECCCCCCCCCCCCCCHHHHEEECCCCCHHHHHHHCCCCCCCEEEEEEECC IDGGTASANKVGSSEISAQFEDIVDSVNVQVTAAVIERIEITPRVDTVYLENITQFYAHA CCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEHHHEECCCCCCEEHHHHHHHHHHHE YFSDGTVLDVTLDANWKSDSPQIVTIQTGSSRAGQAMGVSQDGAASISADYAGFSDSLSL EECCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE KAVPNMPESIEIIPNELTLKNGGYAEVQVMVTYSNGDVYDYAKYVDWSSSDDSIAYGHQD EECCCCCCCEEEECCEEEECCCCEEEEEEEEEECCCCEEEHHHHCCCCCCCCCEEECCHH VIRAEGVGHATVTATMETVSGSAEVTVTP HHHHCCCCCEEEEEEEEECCCCEEEEEEC >Mature Secondary Structure MKQVELLEIQVTPADARVNINEKQQYKAQAFYSDGHSEDVTKIATWNIDNDSVANVVLSG CCCEEEEEEEEECCCCEEECCHHHHHEEHEEECCCCCCCCEEEEEEECCCCCEEEEEECC EKAGLVSGISHGEGNVMATFESHTGKAKVNVTDVEYLGINIEPANSLVEVGAFQPLTALA CCCCEEECCCCCCCCEEEEEECCCCEEEEEEEEEEEEEEEECCCCHHEECCCCCCHHHHH VYRDAVGGVRYKDVTLLSAWRTENPEIATVSAIGVIKGEAQGMTNVEAYYHDLYGEALVS HHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH VVNSLVTKLTVTPDNLSAPVGTKGRYQAIAAYIDRPDEDVTELATWSSSDIDVVHIVTSG HHHHHHHEEEECCCCCCCCCCCCCCHHHHEEECCCCCHHHHHHHCCCCCCCEEEEEEECC IDGGTASANKVGSSEISAQFEDIVDSVNVQVTAAVIERIEITPRVDTVYLENITQFYAHA CCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEHHHEECCCCCCEEHHHHHHHHHHHE YFSDGTVLDVTLDANWKSDSPQIVTIQTGSSRAGQAMGVSQDGAASISADYAGFSDSLSL EECCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE KAVPNMPESIEIIPNELTLKNGGYAEVQVMVTYSNGDVYDYAKYVDWSSSDDSIAYGHQD EECCCCCCCEEEECCEEEECCCCEEEEEEEEEECCCCEEEHHHHCCCCCCCCCEEECCHH VIRAEGVGHATVTATMETVSGSAEVTVTP HHHHCCCCCEEEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA