| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ydeG [H]
Identifier: 157960749
GI number: 157960749
Start: 1128794
End: 1129981
Strand: Direct
Name: ydeG [H]
Synonym: Spea_0921
Alternate gene names: 157960749
Gene position: 1128794-1129981 (Clockwise)
Preceding gene: 157960745
Following gene: 157960750
Centisome position: 21.81
GC content: 50.51
Gene sequence:
>1188_bases ATGCCATTTAATGTTTGGCTATTAACACTAGCACAGGCGTTTGCCATGAGTGCCACTCCTATGATGATGTTACTCGGAGG ATTGATTGGCGCCCAAATTGCGCCGTCGCCTGAGTTAGCGACTCTGCCGATAGCCTCTATGGTGGTAGGACTTGCCTTGT CGGTGCTGCCTGTATCTAGGTTGATGCAGCGCTTTGGTCGCAAGCCTGTGTTTGTTGGCGGGGCGTTGCTGGCAGCCAGT TCTGGGCTTGTTGCAGCGCTGGCGACGTCGGAGCAAAACTTTATCTTATTTTGTTTGAGTGGCGTGATGCTAGGTTCGGC GGGGGCTGTAGTGCAACAATATCGTTTTGCGGCAATGGAGTCGGTAAGTGAGGAACTGGTGGCAAAGGCCGCCTCTAGAG TCTTGCTTGGGGGGCTTGCTGCTGCCGTTATCGGGCCTGAATTAGCCGTTTGGGGTAGCCTGCTTTGGCAACAAACATAT GTGGGAGCATTTTTGTTGCTGACGTTAGTGAGCCTAGTTGCGGCGGTGATTTTGAGCTTCTATCGTGAGCCGAAATGCGA AACAAGCAGTGACTCTCAGCGAGTGGAAAATAATGCCCGTTCGCTAACGGAGATTTTAGCGCAGCCACAACTTTGGGTGG CAATTGCGGGAGCGACTCTAGGTTATGCCATGATGAGCTTTGTGATGACGGCGACACCACTGCATATGCATCATGTCGAG CAGCACTCGCTTGCGGATACCAAGTGGGTGATCCAAAGCCATATTATTGCCATGTACTTGCCTTCATTATTTAGCGGAGC CTTGGTGGCTCGCTTGGGTGTCTCCAAGATGATGCTACTGGGGTTGCTTGCTTACCTTGTTACCATTATCACGGCGGTCA TTGGTCGAGATCTACTTAACTATTGGGCCGCCTTGGTATTACTTGGGATCGGTTGGAACTTCCTCTTTGTGGCGGGGACA GCCTTGCTACCTCGTTGTTATGCGAAGACTGAACGTTACAAGGTGCAGTCTTTTAATGACACCTTTATATTCGGCGCTCA AGCTATGGCATCGCTGAGTGCGGGCTGGGTGATCCACCTGTTAGGTTGGAATGTTTTGTTGCTAAGCTGCTTACCTCTAA TTGTGGCTCAGGTACTGCTTATTACATGGTGGAAATGGAGTAGAACCAAAGCGCTATCAAATCATTAA
Upstream 100 bases:
>100_bases TTGGACGAATGATTTATAAAGCGCCCCGAACCTGCCACACTGGCTCTAGATAATATAGGGTTAACTAAGATAAAAACTGC AATAAGGAAGCGCGAATCGT
Downstream 100 bases:
>100_bases GCGCTAATTGTTAGCCACTTTTGTCGTATTTTTATCAGTAGTTATTTGCATTTTTACTGATTGTTACTGACGCTTTGTAT ATTTTATGCTAGAAAGTGAG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MPFNVWLLTLAQAFAMSATPMMMLLGGLIGAQIAPSPELATLPIASMVVGLALSVLPVSRLMQRFGRKPVFVGGALLAAS SGLVAALATSEQNFILFCLSGVMLGSAGAVVQQYRFAAMESVSEELVAKAASRVLLGGLAAAVIGPELAVWGSLLWQQTY VGAFLLLTLVSLVAAVILSFYREPKCETSSDSQRVENNARSLTEILAQPQLWVAIAGATLGYAMMSFVMTATPLHMHHVE QHSLADTKWVIQSHIIAMYLPSLFSGALVARLGVSKMMLLGLLAYLVTIITAVIGRDLLNYWAALVLLGIGWNFLFVAGT ALLPRCYAKTERYKVQSFNDTFIFGAQAMASLSAGWVIHLLGWNVLLLSCLPLIVAQVLLITWWKWSRTKALSNH
Sequences:
>Translated_395_residues MPFNVWLLTLAQAFAMSATPMMMLLGGLIGAQIAPSPELATLPIASMVVGLALSVLPVSRLMQRFGRKPVFVGGALLAAS SGLVAALATSEQNFILFCLSGVMLGSAGAVVQQYRFAAMESVSEELVAKAASRVLLGGLAAAVIGPELAVWGSLLWQQTY VGAFLLLTLVSLVAAVILSFYREPKCETSSDSQRVENNARSLTEILAQPQLWVAIAGATLGYAMMSFVMTATPLHMHHVE QHSLADTKWVIQSHIIAMYLPSLFSGALVARLGVSKMMLLGLLAYLVTIITAVIGRDLLNYWAALVLLGIGWNFLFVAGT ALLPRCYAKTERYKVQSFNDTFIFGAQAMASLSAGWVIHLLGWNVLLLSCLPLIVAQVLLITWWKWSRTKALSNH >Mature_394_residues PFNVWLLTLAQAFAMSATPMMMLLGGLIGAQIAPSPELATLPIASMVVGLALSVLPVSRLMQRFGRKPVFVGGALLAASS GLVAALATSEQNFILFCLSGVMLGSAGAVVQQYRFAAMESVSEELVAKAASRVLLGGLAAAVIGPELAVWGSLLWQQTYV GAFLLLTLVSLVAAVILSFYREPKCETSSDSQRVENNARSLTEILAQPQLWVAIAGATLGYAMMSFVMTATPLHMHHVEQ HSLADTKWVIQSHIIAMYLPSLFSGALVARLGVSKMMLLGLLAYLVTIITAVIGRDLLNYWAALVLLGIGWNFLFVAGTA LLPRCYAKTERYKVQSFNDTFIFGAQAMASLSAGWVIHLLGWNVLLLSCLPLIVAQVLLITWWKWSRTKALSNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42569; Mature: 42438
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFNVWLLTLAQAFAMSATPMMMLLGGLIGAQIAPSPELATLPIASMVVGLALSVLPVSR CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LMQRFGRKPVFVGGALLAASSGLVAALATSEQNFILFCLSGVMLGSAGAVVQQYRFAAME HHHHHCCCCEEECHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHH SVSEELVAKAASRVLLGGLAAAVIGPELAVWGSLLWQQTYVGAFLLLTLVSLVAAVILSF HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YREPKCETSSDSQRVENNARSLTEILAQPQLWVAIAGATLGYAMMSFVMTATPLHMHHVE HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHH QHSLADTKWVIQSHIIAMYLPSLFSGALVARLGVSKMMLLGLLAYLVTIITAVIGRDLLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YWAALVLLGIGWNFLFVAGTALLPRCYAKTERYKVQSFNDTFIFGAQAMASLSAGWVIHL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCHHHHH LGWNVLLLSCLPLIVAQVLLITWWKWSRTKALSNH HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC >Mature Secondary Structure PFNVWLLTLAQAFAMSATPMMMLLGGLIGAQIAPSPELATLPIASMVVGLALSVLPVSR CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LMQRFGRKPVFVGGALLAASSGLVAALATSEQNFILFCLSGVMLGSAGAVVQQYRFAAME HHHHHCCCCEEECHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHH SVSEELVAKAASRVLLGGLAAAVIGPELAVWGSLLWQQTYVGAFLLLTLVSLVAAVILSF HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YREPKCETSSDSQRVENNARSLTEILAQPQLWVAIAGATLGYAMMSFVMTATPLHMHHVE HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHH QHSLADTKWVIQSHIIAMYLPSLFSGALVARLGVSKMMLLGLLAYLVTIITAVIGRDLLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YWAALVLLGIGWNFLFVAGTALLPRCYAKTERYKVQSFNDTFIFGAQAMASLSAGWVIHL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCHHHHH LGWNVLLLSCLPLIVAQVLLITWWKWSRTKALSNH HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]