Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157960746

Identifier: 157960746

GI number: 157960746

Start: 1124217

End: 1124855

Strand: Reverse

Name: 157960746

Synonym: Spea_0918

Alternate gene names: NA

Gene position: 1124855-1124217 (Counterclockwise)

Preceding gene: 157960747

Following gene: 157960744

Centisome position: 21.74

GC content: 45.38

Gene sequence:

>639_bases
ATGTCAGATATCACCTATAACCAAGCTGTTTTAGAGTTCGCCATTGCGGGACTCGAAGCACTTTCAGAAGCTAGCGCTAA
GAGTAGTAGCGTAAGAACACCGGCAGCTGAGAGTCATTTTCTTTGCAGCTGGATGGTCACCGCATTAAAGCAACGCACCT
TTTCAAAGTTAGTTGCCGATGACTTGACCCTGTGGATCCGTCAGGGGCGTAGCATGGGTGCCGGCGCCGAACTAAAAATG
CTTTTAGAGAAGATTAAGGCGCAATATAGCTACATTAGCGACAAGCAAGCAGGCTTAGGTCAATCCCTTAACGCCATGCT
AACTGAGCTTGAAGGCCAAGAGTGGATAGTTATCACCGACCAAGAGGTGACTAAAAAGCTAAAACTCGATAGCGATGGCT
GTAATAGCCTAGTTATTTCTGATGAGCAATACAGTCAGCGCATTGAAGGGGATGAGATTATTAAACCTATCACCCTTTAT
GTTCGTGCCGATGAAACTGAGTTCGCTCAAATTGCTTATCGCCACGATTTGCTGCTAAGCCCTGGTAATAAGAAGAGTTC
TTTGATTAAACATCACAAAGCCTATCAAGTCTGGCCCAAGAACCTACAACCTGCACTAACGATACTGCAAGCACTCTAA

Upstream 100 bases:

>100_bases
TAGCGTTTGATATTGGAAACACAAGTTAGTTTTATACTTATCCCCCCATTAGGTATAATCCCTTGCCGTCTCTTTTATCA
CTTCACACGGCGGAGAATTC

Downstream 100 bases:

>100_bases
GCAGAACAGGATTTAAGTGTCAATCAAACATAAAAAGGCCTGCTGATGCAGGCCTTTTTGCTCTAGTTTAACTGAGCTTA
AAAATTAAAACGTTACGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSDITYNQAVLEFAIAGLEALSEASAKSSSVRTPAAESHFLCSWMVTALKQRTFSKLVADDLTLWIRQGRSMGAGAELKM
LLEKIKAQYSYISDKQAGLGQSLNAMLTELEGQEWIVITDQEVTKKLKLDSDGCNSLVISDEQYSQRIEGDEIIKPITLY
VRADETEFAQIAYRHDLLLSPGNKKSSLIKHHKAYQVWPKNLQPALTILQAL

Sequences:

>Translated_212_residues
MSDITYNQAVLEFAIAGLEALSEASAKSSSVRTPAAESHFLCSWMVTALKQRTFSKLVADDLTLWIRQGRSMGAGAELKM
LLEKIKAQYSYISDKQAGLGQSLNAMLTELEGQEWIVITDQEVTKKLKLDSDGCNSLVISDEQYSQRIEGDEIIKPITLY
VRADETEFAQIAYRHDLLLSPGNKKSSLIKHHKAYQVWPKNLQPALTILQAL
>Mature_211_residues
SDITYNQAVLEFAIAGLEALSEASAKSSSVRTPAAESHFLCSWMVTALKQRTFSKLVADDLTLWIRQGRSMGAGAELKML
LEKIKAQYSYISDKQAGLGQSLNAMLTELEGQEWIVITDQEVTKKLKLDSDGCNSLVISDEQYSQRIEGDEIIKPITLYV
RADETEFAQIAYRHDLLLSPGNKKSSLIKHHKAYQVWPKNLQPALTILQAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23663; Mature: 23532

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDITYNQAVLEFAIAGLEALSEASAKSSSVRTPAAESHFLCSWMVTALKQRTFSKLVAD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DLTLWIRQGRSMGAGAELKMLLEKIKAQYSYISDKQAGLGQSLNAMLTELEGQEWIVITD
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEC
QEVTKKLKLDSDGCNSLVISDEQYSQRIEGDEIIKPITLYVRADETEFAQIAYRHDLLLS
HHHHHHHCCCCCCCCEEEECCHHHHHHCCCCHHCCEEEEEEECCCHHHHHHHHHHHEEEC
PGNKKSSLIKHHKAYQVWPKNLQPALTILQAL
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHC
>Mature Secondary Structure 
SDITYNQAVLEFAIAGLEALSEASAKSSSVRTPAAESHFLCSWMVTALKQRTFSKLVAD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DLTLWIRQGRSMGAGAELKMLLEKIKAQYSYISDKQAGLGQSLNAMLTELEGQEWIVITD
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEC
QEVTKKLKLDSDGCNSLVISDEQYSQRIEGDEIIKPITLYVRADETEFAQIAYRHDLLLS
HHHHHHHCCCCCCCCEEEECCHHHHHHCCCCHHCCEEEEEEECCCHHHHHHHHHHHEEEC
PGNKKSSLIKHHKAYQVWPKNLQPALTILQAL
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA