| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is apaH [H]
Identifier: 157960688
GI number: 157960688
Start: 1058690
End: 1059523
Strand: Reverse
Name: apaH [H]
Synonym: Spea_0860
Alternate gene names: 157960688
Gene position: 1059523-1058690 (Counterclockwise)
Preceding gene: 157960689
Following gene: 157960687
Centisome position: 20.48
GC content: 44.72
Gene sequence:
>834_bases ATGGCAAATTATTTTGTAGGTGATATACAAGGCTGTTTCGATGAGTTAATGCTACTTCTCGATAAAGTCGATTTTAATCC ATCCAAAGACTGCTTATGGGCAGTAGGAGATCTCGTTGCAAGGGGGCCTGGCTCTCTGGAAACCCTGCGCTTCTTTAAGT CGCTAGCTAACTCTGCAAAAGTCGTATTAGGCAATCACGATCTCCACTTGCTCGCCATTCATGGCAAGTTAAAGCGAGCC AACCCTAAAGATCATTTAGCCGCATTGCTCGCAGCAGAAGACATTAACAATATTATCGACTGGCTAAGAATGCAGCCTCT GTATCAGGAGTGCCCTGAACAACAGCTTATTATGACCCATGCTGGCGTACCACCAAATTGGGATCTGGCAACCCTGCACA CAGAAGCAAATCGAGTCAGCGAAATCCTTAAGTCTAAGAACTATCTGCACGACTTAGTCAGCGAAATGTACACCAACTCT GTCGACGAATATCGCTCGTCTCTATCGCCGTTAGAAAAGCAGATCTATTGCATTAATGCACTTACCCGCATGCGTTACCT TAAACAAGATGGCCGCTTAGATTTCGACTGTAAGTCTCCAATTCAAAACTGTAACCATGCTGAACTGACACCTTGGTTTG AGCTTGAGTCCAAATTACCTAGCGACTATACCTTAGTCTTTGGTCATTGGGCCGCCATTATGGGACAGACCAATCACCCT AACCGCTTAGCTTTAGATACGGGCTGCTGTTGGGGAGAACACATGACCCTGTGGCATTTGGAGTCGAACCAGAAAATCAC TCAAGAGAAATTAAAACACGTTAAAAGAAGTTAA
Upstream 100 bases:
>100_bases TCGCTTATCTATCCCAGGCTTGCTTCATTAACATAACGGCTTTCCGTTTACCTGTTCCCAGTTTGATCCACTAACATAGA AAAATAATATCTAGGTAAAA
Downstream 100 bases:
>100_bases AAAAGAGTTAAGCTATTGCAACATTAGGCCGATAGACTATTCGAGGCCCTTGTCAGGTCGGTACTGAGATTTAGATAAAA ATAATAATAAAATGGAGCTC
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MANYFVGDIQGCFDELMLLLDKVDFNPSKDCLWAVGDLVARGPGSLETLRFFKSLANSAKVVLGNHDLHLLAIHGKLKRA NPKDHLAALLAAEDINNIIDWLRMQPLYQECPEQQLIMTHAGVPPNWDLATLHTEANRVSEILKSKNYLHDLVSEMYTNS VDEYRSSLSPLEKQIYCINALTRMRYLKQDGRLDFDCKSPIQNCNHAELTPWFELESKLPSDYTLVFGHWAAIMGQTNHP NRLALDTGCCWGEHMTLWHLESNQKITQEKLKHVKRS
Sequences:
>Translated_277_residues MANYFVGDIQGCFDELMLLLDKVDFNPSKDCLWAVGDLVARGPGSLETLRFFKSLANSAKVVLGNHDLHLLAIHGKLKRA NPKDHLAALLAAEDINNIIDWLRMQPLYQECPEQQLIMTHAGVPPNWDLATLHTEANRVSEILKSKNYLHDLVSEMYTNS VDEYRSSLSPLEKQIYCINALTRMRYLKQDGRLDFDCKSPIQNCNHAELTPWFELESKLPSDYTLVFGHWAAIMGQTNHP NRLALDTGCCWGEHMTLWHLESNQKITQEKLKHVKRS >Mature_276_residues ANYFVGDIQGCFDELMLLLDKVDFNPSKDCLWAVGDLVARGPGSLETLRFFKSLANSAKVVLGNHDLHLLAIHGKLKRAN PKDHLAALLAAEDINNIIDWLRMQPLYQECPEQQLIMTHAGVPPNWDLATLHTEANRVSEILKSKNYLHDLVSEMYTNSV DEYRSSLSPLEKQIYCINALTRMRYLKQDGRLDFDCKSPIQNCNHAELTPWFELESKLPSDYTLVFGHWAAIMGQTNHPN RLALDTGCCWGEHMTLWHLESNQKITQEKLKHVKRS
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=273, Percent_Identity=43.956043956044, Blast_Score=244, Evalue=5e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 31671; Mature: 31539
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANYFVGDIQGCFDELMLLLDKVDFNPSKDCLWAVGDLVARGPGSLETLRFFKSLANSAK CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCE VVLGNHDLHLLAIHGKLKRANPKDHLAALLAAEDINNIIDWLRMQPLYQECPEQQLIMTH EEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHEEHHC AGVPPNWDLATLHTEANRVSEILKSKNYLHDLVSEMYTNSVDEYRSSLSPLEKQIYCINA CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LTRMRYLKQDGRLDFDCKSPIQNCNHAELTPWFELESKLPSDYTLVFGHWAAIMGQTNHP HHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHCCCCCC NRLALDTGCCWGEHMTLWHLESNQKITQEKLKHVKRS CEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure ANYFVGDIQGCFDELMLLLDKVDFNPSKDCLWAVGDLVARGPGSLETLRFFKSLANSAK CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCE VVLGNHDLHLLAIHGKLKRANPKDHLAALLAAEDINNIIDWLRMQPLYQECPEQQLIMTH EEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHEEHHC AGVPPNWDLATLHTEANRVSEILKSKNYLHDLVSEMYTNSVDEYRSSLSPLEKQIYCINA CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LTRMRYLKQDGRLDFDCKSPIQNCNHAELTPWFELESKLPSDYTLVFGHWAAIMGQTNHP HHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHCCCCCC NRLALDTGCCWGEHMTLWHLESNQKITQEKLKHVKRS CEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA