| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is srmB [H]
Identifier: 157960630
GI number: 157960630
Start: 993624
End: 994859
Strand: Reverse
Name: srmB [H]
Synonym: Spea_0802
Alternate gene names: 157960630
Gene position: 994859-993624 (Counterclockwise)
Preceding gene: 157960631
Following gene: 157960629
Centisome position: 19.23
GC content: 47.41
Gene sequence:
>1236_bases ATGCCACGCATGCAATTTGAAGATCTCCAGCTTGACCCTTGTTTGTTAGAGTCACTAAAAGCAATGGGCCACAACAAGCC CACTACGATACAACAACAAACAATACCGGTTGCCATGGAGCAAAGAGATATTTTAGCTCGTGCCCCTACGGGTACAGGTA AAACGGCAAGTTTTCTTCTACCTGCGTTGCAACACCTTATCGATTTTCCACGTCGATATGGCGGCCGTGCACGAGTATTG ATTCTTACTCCTACTCGTGAGCTTGCCAGCCAAATCCATCGTTATGCTAGCCACCTTGCTACTGGTCTAGGCTTAGACAC AGTTATCATCACTGGCGGTGTGCCTTACGGTCCTCAGGAAGAAGCGCTACAGAAGAACGTTGATATCTTAGTTGCCACTC CAGGCCGTTTAATGGAGTACCTAGACAAGGGTCACTTCAACGCAGAAGAAGTAGAAGTACTGATCATCGATGAAGCCGAC CGCATGCTGGATATGGGCTTCTCGGCTGTTGTTGAAAGCATTGCAATCGAGTCTGTTGGTCGTAAGCAAACTATGCTGTT CTCAGCCACGCTTGAAGGCAGTGACGTTGGCCGTTTCTCGCACAACCTACTGACCAATCCGGTTAAGCTTGAAGCAGAAG CACCACGTAGCGAAAAAGCCAAGATCCACCAGTGGATCCACCTAGCCGACGACAAAGCGCATAAGTTTGCCCTGTTGTGC GCTCTATTAAAACAAGAGGAAGTGCAACGCACTATCGTCTTCGTTAAGACACGTGAATCGGTAGCTAGCCTAGAAGGCTT GCTACAAAAAGAAGGCATCACTTGTGCATTTATGCGCGGTGACATGGAGCAAAAAGCGCGCTTCCAGGCATTAGGTCGTT TCACCAAAGGTGAAGTGAATATCTTGCTAGCAACTGACGTTGCCGCACGTGGTATCGATATTGACGATATTACCCATGTT ATCAACTTCGATATGCCACGCTCAGCAGATACTTATGTACACCGTATCGGTCGTACAGGCCGCGCTGGCGCTAAAGGTAC AGCTATATCACTAGTTGAAGCCCATGACATCCGTGTTGTTGGTAAAATCGAGCGTTATATCGAGCAACCATTAAAGCGTC GCTTCGTTAAAGATCTGCGTCCAAAGAACAAAGAAGCTAAGCCGCCTGGAAAGAAAAAGCCGGGGCCAGAAGGTAAGAAT TTTAGCAAGAAGAACAAAAAGAAAAAGAAGAAGTAA
Upstream 100 bases:
>100_bases ATTGAGTAGAGATTTTTATTTAAAGCTTTAAGGATCTAGCGATCTAATCGTTTAAAGTCGCTTCTATAAGCTTTATAATA CTCGGCTATTATTTATTGAG
Downstream 100 bases:
>100_bases CATCACTTCCTCTTAATCTAAAAGGGTCACATCATGTGACCCTTTTCTGTTTTTATACAGCAGATCTTGCCACTGTCTGC CATAACAAGCAAACAACATA
Product: ATP-dependent RNA helicase SrmB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MPRMQFEDLQLDPCLLESLKAMGHNKPTTIQQQTIPVAMEQRDILARAPTGTGKTASFLLPALQHLIDFPRRYGGRARVL ILTPTRELASQIHRYASHLATGLGLDTVIITGGVPYGPQEEALQKNVDILVATPGRLMEYLDKGHFNAEEVEVLIIDEAD RMLDMGFSAVVESIAIESVGRKQTMLFSATLEGSDVGRFSHNLLTNPVKLEAEAPRSEKAKIHQWIHLADDKAHKFALLC ALLKQEEVQRTIVFVKTRESVASLEGLLQKEGITCAFMRGDMEQKARFQALGRFTKGEVNILLATDVAARGIDIDDITHV INFDMPRSADTYVHRIGRTGRAGAKGTAISLVEAHDIRVVGKIERYIEQPLKRRFVKDLRPKNKEAKPPGKKKPGPEGKN FSKKNKKKKKK
Sequences:
>Translated_411_residues MPRMQFEDLQLDPCLLESLKAMGHNKPTTIQQQTIPVAMEQRDILARAPTGTGKTASFLLPALQHLIDFPRRYGGRARVL ILTPTRELASQIHRYASHLATGLGLDTVIITGGVPYGPQEEALQKNVDILVATPGRLMEYLDKGHFNAEEVEVLIIDEAD RMLDMGFSAVVESIAIESVGRKQTMLFSATLEGSDVGRFSHNLLTNPVKLEAEAPRSEKAKIHQWIHLADDKAHKFALLC ALLKQEEVQRTIVFVKTRESVASLEGLLQKEGITCAFMRGDMEQKARFQALGRFTKGEVNILLATDVAARGIDIDDITHV INFDMPRSADTYVHRIGRTGRAGAKGTAISLVEAHDIRVVGKIERYIEQPLKRRFVKDLRPKNKEAKPPGKKKPGPEGKN FSKKNKKKKKK >Mature_410_residues PRMQFEDLQLDPCLLESLKAMGHNKPTTIQQQTIPVAMEQRDILARAPTGTGKTASFLLPALQHLIDFPRRYGGRARVLI LTPTRELASQIHRYASHLATGLGLDTVIITGGVPYGPQEEALQKNVDILVATPGRLMEYLDKGHFNAEEVEVLIIDEADR MLDMGFSAVVESIAIESVGRKQTMLFSATLEGSDVGRFSHNLLTNPVKLEAEAPRSEKAKIHQWIHLADDKAHKFALLCA LLKQEEVQRTIVFVKTRESVASLEGLLQKEGITCAFMRGDMEQKARFQALGRFTKGEVNILLATDVAARGIDIDDITHVI NFDMPRSADTYVHRIGRTGRAGAKGTAISLVEAHDIRVVGKIERYIEQPLKRRFVKDLRPKNKEAKPPGKKKPGPEGKNF SKKNKKKKKK
Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=376, Percent_Identity=38.8297872340425, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI45446747, Length=369, Percent_Identity=35.7723577235772, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI45446743, Length=369, Percent_Identity=35.7723577235772, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI301171467, Length=376, Percent_Identity=36.968085106383, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI87196351, Length=376, Percent_Identity=36.968085106383, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI301171475, Length=376, Percent_Identity=36.968085106383, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI222352149, Length=377, Percent_Identity=37.6657824933687, Blast_Score=232, Evalue=4e-61, Organism=Homo sapiens, GI20149629, Length=367, Percent_Identity=37.0572207084469, Blast_Score=231, Evalue=8e-61, Organism=Homo sapiens, GI4758138, Length=366, Percent_Identity=35.2459016393443, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI31542656, Length=382, Percent_Identity=39.2670157068063, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI169881239, Length=374, Percent_Identity=36.096256684492, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI13514809, Length=374, Percent_Identity=36.096256684492, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI148613856, Length=374, Percent_Identity=34.2245989304813, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI38201710, Length=374, Percent_Identity=34.2245989304813, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI262118318, Length=377, Percent_Identity=35.8090185676393, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI216548263, Length=377, Percent_Identity=35.8090185676393, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI262231852, Length=377, Percent_Identity=35.8090185676393, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI13518015, Length=377, Percent_Identity=35.8090185676393, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI164419743, Length=356, Percent_Identity=38.2022471910112, Blast_Score=218, Evalue=7e-57, Organism=Homo sapiens, GI51094101, Length=356, Percent_Identity=38.2022471910112, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI188035877, Length=371, Percent_Identity=36.9272237196765, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI41327771, Length=402, Percent_Identity=33.5820895522388, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI55749865, Length=377, Percent_Identity=33.6870026525199, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI164664518, Length=394, Percent_Identity=31.4720812182741, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI41327773, Length=397, Percent_Identity=33.5012594458438, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI7661920, Length=361, Percent_Identity=32.409972299169, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI21071032, Length=363, Percent_Identity=33.6088154269972, Blast_Score=201, Evalue=7e-52, Organism=Homo sapiens, GI41327776, Length=367, Percent_Identity=34.0599455040872, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI8922886, Length=387, Percent_Identity=31.5245478036176, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI13514831, Length=353, Percent_Identity=34.2776203966006, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI6005743, Length=387, Percent_Identity=31.266149870801, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI38569503, Length=373, Percent_Identity=34.0482573726542, Blast_Score=185, Evalue=5e-47, Organism=Homo sapiens, GI38569505, Length=373, Percent_Identity=34.0482573726542, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI4503529, Length=363, Percent_Identity=32.7823691460055, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI83700235, Length=364, Percent_Identity=32.6923076923077, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI62241022, Length=371, Percent_Identity=30.4582210242588, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=30.9226932668329, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI21040371, Length=373, Percent_Identity=30.8310991957105, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI38327634, Length=378, Percent_Identity=32.2751322751323, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI4758112, Length=371, Percent_Identity=30.188679245283, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI18375623, Length=371, Percent_Identity=30.188679245283, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI50659095, Length=362, Percent_Identity=33.4254143646409, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI41327779, Length=399, Percent_Identity=32.8320802005013, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI164419732, Length=380, Percent_Identity=29.4736842105263, Blast_Score=165, Evalue=6e-41, Organism=Homo sapiens, GI62241024, Length=349, Percent_Identity=30.3724928366762, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI13129006, Length=390, Percent_Identity=30.5128205128205, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI17505907, Length=422, Percent_Identity=29.8578199052133, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI256223453, Length=360, Percent_Identity=30, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI9966805, Length=325, Percent_Identity=32, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI256773275, Length=429, Percent_Identity=32.4009324009324, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=31.2312312312312, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI154759257, Length=414, Percent_Identity=29.2270531400966, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI20336298, Length=361, Percent_Identity=29.0858725761773, Blast_Score=104, Evalue=2e-22, Organism=Escherichia coli, GI1788930, Length=382, Percent_Identity=54.9738219895288, Blast_Score=405, Evalue=1e-114, Organism=Escherichia coli, GI1787016, Length=380, Percent_Identity=40.2631578947368, Blast_Score=287, Evalue=1e-78, Organism=Escherichia coli, GI1790214, Length=368, Percent_Identity=37.7717391304348, Blast_Score=239, Evalue=2e-64, Organism=Escherichia coli, GI87082221, Length=369, Percent_Identity=37.3983739837398, Blast_Score=236, Evalue=2e-63, Organism=Escherichia coli, GI1787605, Length=344, Percent_Identity=37.5, Blast_Score=203, Evalue=1e-53, Organism=Caenorhabditis elegans, GI115533224, Length=360, Percent_Identity=39.1666666666667, Blast_Score=238, Evalue=4e-63, Organism=Caenorhabditis elegans, GI17510559, Length=401, Percent_Identity=35.1620947630923, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17552642, Length=370, Percent_Identity=37.027027027027, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17555296, Length=361, Percent_Identity=36.8421052631579, Blast_Score=226, Evalue=1e-59, Organism=Caenorhabditis elegans, GI71999646, Length=368, Percent_Identity=35.3260869565217, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71999644, Length=368, Percent_Identity=35.3260869565217, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17510307, Length=365, Percent_Identity=35.3424657534247, Blast_Score=215, Evalue=3e-56, Organism=Caenorhabditis elegans, GI71995514, Length=365, Percent_Identity=35.3424657534247, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=35.3424657534247, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI71995724, Length=361, Percent_Identity=33.5180055401662, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17507121, Length=361, Percent_Identity=33.2409972299169, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI71987143, Length=362, Percent_Identity=32.3204419889503, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI86570094, Length=415, Percent_Identity=34.2168674698795, Blast_Score=206, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17507945, Length=364, Percent_Identity=35.4395604395604, Blast_Score=204, Evalue=8e-53, Organism=Caenorhabditis elegans, GI71995718, Length=364, Percent_Identity=35.989010989011, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI32565321, Length=402, Percent_Identity=31.8407960199005, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17507881, Length=390, Percent_Identity=33.3333333333333, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=34.8525469168901, Blast_Score=194, Evalue=9e-50, Organism=Caenorhabditis elegans, GI17552114, Length=372, Percent_Identity=31.989247311828, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17537549, Length=412, Percent_Identity=32.7669902912621, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17507879, Length=383, Percent_Identity=33.9425587467363, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17509811, Length=375, Percent_Identity=32, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17505370, Length=346, Percent_Identity=33.8150289017341, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=32.3834196891192, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI71982858, Length=368, Percent_Identity=30.7065217391304, Blast_Score=166, Evalue=1e-41, Organism=Caenorhabditis elegans, GI193208216, Length=389, Percent_Identity=31.8766066838046, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI25148203, Length=425, Percent_Identity=27.7647058823529, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI115532546, Length=388, Percent_Identity=31.1855670103093, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI115532548, Length=382, Percent_Identity=31.151832460733, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17508543, Length=381, Percent_Identity=28.0839895013123, Blast_Score=160, Evalue=8e-40, Organism=Caenorhabditis elegans, GI32564046, Length=378, Percent_Identity=32.5396825396825, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI71990816, Length=387, Percent_Identity=32.2997416020672, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17536099, Length=395, Percent_Identity=28.3544303797468, Blast_Score=147, Evalue=7e-36, Organism=Caenorhabditis elegans, GI17536101, Length=398, Percent_Identity=28.894472361809, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI193206561, Length=350, Percent_Identity=30, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17536103, Length=398, Percent_Identity=28.894472361809, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI17556951, Length=371, Percent_Identity=28.8409703504043, Blast_Score=137, Evalue=9e-33, Organism=Caenorhabditis elegans, GI17553716, Length=365, Percent_Identity=26.5753424657534, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=28.1818181818182, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI25148205, Length=341, Percent_Identity=26.099706744868, Blast_Score=118, Evalue=5e-27, Organism=Caenorhabditis elegans, GI71997889, Length=371, Percent_Identity=28.0323450134771, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71982862, Length=189, Percent_Identity=32.2751322751323, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17565430, Length=381, Percent_Identity=23.6220472440945, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71987152, Length=93, Percent_Identity=43.010752688172, Blast_Score=89, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6325138, Length=400, Percent_Identity=36.75, Blast_Score=240, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6324778, Length=427, Percent_Identity=33.9578454332553, Blast_Score=233, Evalue=5e-62, Organism=Saccharomyces cerevisiae, GI6324217, Length=354, Percent_Identity=37.2881355932203, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6321856, Length=373, Percent_Identity=36.1930294906166, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6321360, Length=386, Percent_Identity=34.9740932642487, Blast_Score=223, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=35.8333333333333, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6320173, Length=419, Percent_Identity=32.6968973747017, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=34.4444444444444, Blast_Score=204, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6320224, Length=364, Percent_Identity=31.8681318681319, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=32.6869806094183, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6323947, Length=356, Percent_Identity=36.2359550561798, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6320449, Length=390, Percent_Identity=32.0512820512821, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6322912, Length=362, Percent_Identity=32.8729281767956, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6322323, Length=362, Percent_Identity=32.8729281767956, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6320119, Length=374, Percent_Identity=34.4919786096257, Blast_Score=177, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6324620, Length=374, Percent_Identity=31.283422459893, Blast_Score=173, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6321963, Length=426, Percent_Identity=31.6901408450704, Blast_Score=170, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6321111, Length=371, Percent_Identity=31.266846361186, Blast_Score=167, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6323306, Length=411, Percent_Identity=27.2506082725061, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=371, Percent_Identity=32.6145552560647, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=404, Percent_Identity=28.7128712871287, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6320400, Length=366, Percent_Identity=31.4207650273224, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6319714, Length=356, Percent_Identity=30.8988764044944, Blast_Score=150, Evalue=5e-37, Organism=Saccharomyces cerevisiae, GI6324366, Length=378, Percent_Identity=28.8359788359788, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6322876, Length=446, Percent_Identity=28.0269058295964, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6321374, Length=381, Percent_Identity=22.3097112860892, Blast_Score=83, Evalue=9e-17, Organism=Drosophila melanogaster, GI21356161, Length=374, Percent_Identity=36.096256684492, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI28574962, Length=354, Percent_Identity=36.7231638418079, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI24644483, Length=363, Percent_Identity=35.2617079889807, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI24644487, Length=363, Percent_Identity=35.2617079889807, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI45551833, Length=363, Percent_Identity=35.2617079889807, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI24644485, Length=363, Percent_Identity=35.2617079889807, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI281361218, Length=363, Percent_Identity=35.2617079889807, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI24644481, Length=363, Percent_Identity=35.2617079889807, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI24644479, Length=363, Percent_Identity=35.2617079889807, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI24662330, Length=369, Percent_Identity=35.7723577235772, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24584399, Length=362, Percent_Identity=37.5690607734807, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=35.0923482849604, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI24585582, Length=371, Percent_Identity=34.7708894878706, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI21355075, Length=352, Percent_Identity=36.9318181818182, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI18857967, Length=362, Percent_Identity=35.6353591160221, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=35.8543417366947, Blast_Score=215, Evalue=4e-56, Organism=Drosophila melanogaster, GI24645031, Length=361, Percent_Identity=33.2409972299169, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI17977678, Length=363, Percent_Identity=34.435261707989, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI28575014, Length=371, Percent_Identity=33.9622641509434, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24584994, Length=376, Percent_Identity=33.5106382978723, Blast_Score=198, Evalue=7e-51, Organism=Drosophila melanogaster, GI24583281, Length=368, Percent_Identity=30.9782608695652, Blast_Score=194, Evalue=7e-50, Organism=Drosophila melanogaster, GI24583279, Length=368, Percent_Identity=30.9782608695652, Blast_Score=194, Evalue=8e-50, Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=34.2857142857143, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI17136814, Length=382, Percent_Identity=31.9371727748691, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24582080, Length=361, Percent_Identity=32.6869806094183, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24582078, Length=361, Percent_Identity=32.6869806094183, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI17136248, Length=361, Percent_Identity=32.6869806094183, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24582075, Length=361, Percent_Identity=32.6869806094183, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24643725, Length=397, Percent_Identity=30.4785894206549, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24666101, Length=357, Percent_Identity=32.4929971988796, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24581954, Length=370, Percent_Identity=30.5405405405405, Blast_Score=165, Evalue=4e-41, Organism=Drosophila melanogaster, GI24581952, Length=370, Percent_Identity=30.5405405405405, Blast_Score=165, Evalue=4e-41, Organism=Drosophila melanogaster, GI24581956, Length=370, Percent_Identity=30.5405405405405, Blast_Score=165, Evalue=4e-41, Organism=Drosophila melanogaster, GI28571808, Length=364, Percent_Identity=31.3186813186813, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI28571809, Length=364, Percent_Identity=31.3186813186813, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI19920478, Length=380, Percent_Identity=33.1578947368421, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24642822, Length=395, Percent_Identity=29.3670886075949, Blast_Score=157, Evalue=9e-39, Organism=Drosophila melanogaster, GI17136666, Length=424, Percent_Identity=29.0094339622642, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI17647335, Length=432, Percent_Identity=27.3148148148148, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI21355559, Length=396, Percent_Identity=30.8080808080808, Blast_Score=141, Evalue=7e-34, Organism=Drosophila melanogaster, GI20130173, Length=345, Percent_Identity=31.8840579710145, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=29.1411042944785, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI24640164, Length=352, Percent_Identity=26.7045454545455, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI18859659, Length=203, Percent_Identity=32.0197044334975, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI28571338, Length=203, Percent_Identity=32.0197044334975, Blast_Score=93, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 45806; Mature: 45675
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRMQFEDLQLDPCLLESLKAMGHNKPTTIQQQTIPVAMEQRDILARAPTGTGKTASFLL CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHEECCCCCCCHHHHHH PALQHLIDFPRRYGGRARVLILTPTRELASQIHRYASHLATGLGLDTVIITGGVPYGPQE HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH EALQKNVDILVATPGRLMEYLDKGHFNAEEVEVLIIDEADRMLDMGFSAVVESIAIESVG HHHHCCCCEEEECCHHHHHHHHCCCCCHHHEEEEEECCCHHHHHCCHHHHHHHHHHHHCC RKQTMLFSATLEGSDVGRFSHNLLTNPVKLEAEAPRSEKAKIHQWIHLADDKAHKFALLC CCEEEEEEEEECCCCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH ALLKQEEVQRTIVFVKTRESVASLEGLLQKEGITCAFMRGDMEQKARFQALGRFTKGEVN HHHHHHHHHEEEEEEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCEE ILLATDVAARGIDIDDITHVINFDMPRSADTYVHRIGRTGRAGAKGTAISLVEAHDIRVV EEEEECHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHH GKIERYIEQPLKRRFVKDLRPKNKEAKPPGKKKPGPEGKNFSKKNKKKKKK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure PRMQFEDLQLDPCLLESLKAMGHNKPTTIQQQTIPVAMEQRDILARAPTGTGKTASFLL CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHEECCCCCCCHHHHHH PALQHLIDFPRRYGGRARVLILTPTRELASQIHRYASHLATGLGLDTVIITGGVPYGPQE HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH EALQKNVDILVATPGRLMEYLDKGHFNAEEVEVLIIDEADRMLDMGFSAVVESIAIESVG HHHHCCCCEEEECCHHHHHHHHCCCCCHHHEEEEEECCCHHHHHCCHHHHHHHHHHHHCC RKQTMLFSATLEGSDVGRFSHNLLTNPVKLEAEAPRSEKAKIHQWIHLADDKAHKFALLC CCEEEEEEEEECCCCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH ALLKQEEVQRTIVFVKTRESVASLEGLLQKEGITCAFMRGDMEQKARFQALGRFTKGEVN HHHHHHHHHEEEEEEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCEE ILLATDVAARGIDIDDITHVINFDMPRSADTYVHRIGRTGRAGAKGTAISLVEAHDIRVV EEEEECHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHH GKIERYIEQPLKRRFVKDLRPKNKEAKPPGKKKPGPEGKNFSKKNKKKKKK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]