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The map label for this gene is mdtA [H]

Identifier: 157960629

GI number: 157960629

Start: 992185

End: 993444

Strand: Reverse

Name: mdtA [H]

Synonym: Spea_0801

Alternate gene names: 157960629

Gene position: 993444-992185 (Counterclockwise)

Preceding gene: 157960630

Following gene: 157960628

Centisome position: 19.2

GC content: 47.22

Gene sequence:

>1260_bases
ATGCAATCAGATAAGTCTATGCATGGAAACGCAGATCAGATGATAAATAAAATTAAAACAATACTTAGGAGAATGTCTCC
ACTCTTTATTCTTCTTGTCTTTATTATCGCGGCTCAACTGCTGATCAGTACCAAGGAAGCTCCTGAACAGAAAGCCGATA
CGGCGCCAGTGCCTATTGTTGATGTCACAGAAGTGCAGCAACAAACCGTTTCTTTAAACCTCCCCTCTTATGGCGTAGTT
AGCCCTAAATATAAGACTCAGTTGGTCACCGAAGTTCAAGGGCGTATGCAATCTATCTCAAACAACTTTGTTGCCGGTGG
CGTGGTAAAGAAAGGCGATGAACTCGCAGTTATTGAACCATCTGATTACGAAGCCGACCTGATGCAGGCACAAGCATCAC
TAGCCCAGGCCCAAGCCGCCCTAGAAGAAGAGATGGCCAAAGGGGAAGTCGCTAAGAATGACTGGAAAGGCTATGACGGC
GGCATTCCGCCAGAACTAGGTCTACGTCTACCACAGCTGAAACAAGAACAAGCCAATGTTAAATTCCAGCAAGCAGCCCT
CGCACGCGCACAACGCAATCTTGAGCGCACCGTTATTCGTGCGCCATTCGATGGCATCATCAAGGCGCGAAACGTTGACC
TTGGCCAATATGTCACTCTAGGCACTAATCTAGGTGAGTTATATGACACCCGAATAGCCGAAGTCAGACTGCCGCTGTCA
AATAACGACCTCGCCTATCTAGAGTCAGTCGACAATCCAGATACCCATGTTAGCTTAAGTGCCGATCTCGCTGGTCGAGT
GATCACTTGGCAAGGCCAGATAGTACGTAGCGAAGGCGTCATCGATGCCGAAAACCGCATGGTTTACTTAGTTGCCGAAG
TGAAAGATCCTTACCTTAGAGGTCACCGAGCCGAAGGTCAGCTACCGCTGAAATACGGCACCTTTGTTACCGCTGTAATT
AAGGGCCGCACCGTAGAGGGCATCGTTAAGCTGCCTCGCCACCTAGTTCGAGATAATCAAGTCACCATAGTTCATAGCGA
TAACAGCATAGAGCTTCGCTCTGTTAACGTAGTTCGTACCGATCTAGAAAATGTCTATATCAAAGATAGCTTAGACAATG
GTGAGCGCGTATCTCTGACCAATCTGAGCAATGTTGAAGATGGTCAAATTGTAAAGATCGTCGGCGAAGATTCTAGCTCT
AACCAAGACTCTCAAGACGAGAATACAGAAAAGCAACTTGCTAACGCAGGGGTCCAATAA

Upstream 100 bases:

>100_bases
CCATAACAAGCAAACAACATACCTTTCTAGCCACAAACCGCAGTTGGAAACATTTTATTTACAAATAAAGATGTCGCCTC
GACTCTGAGTCTGTTAATTT

Downstream 100 bases:

>100_bases
TGAGCGACCAAAACGACACCCAAAAAGGGCTTATCGCTTGGTTTGCTAAGAACAATGTAGCTGCCAACCTACTGATGTGG
ATCTTAATCATAGGCGGCCT

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Multidrug transporter mdtA [H]

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MQSDKSMHGNADQMINKIKTILRRMSPLFILLVFIIAAQLLISTKEAPEQKADTAPVPIVDVTEVQQQTVSLNLPSYGVV
SPKYKTQLVTEVQGRMQSISNNFVAGGVVKKGDELAVIEPSDYEADLMQAQASLAQAQAALEEEMAKGEVAKNDWKGYDG
GIPPELGLRLPQLKQEQANVKFQQAALARAQRNLERTVIRAPFDGIIKARNVDLGQYVTLGTNLGELYDTRIAEVRLPLS
NNDLAYLESVDNPDTHVSLSADLAGRVITWQGQIVRSEGVIDAENRMVYLVAEVKDPYLRGHRAEGQLPLKYGTFVTAVI
KGRTVEGIVKLPRHLVRDNQVTIVHSDNSIELRSVNVVRTDLENVYIKDSLDNGERVSLTNLSNVEDGQIVKIVGEDSSS
NQDSQDENTEKQLANAGVQ

Sequences:

>Translated_419_residues
MQSDKSMHGNADQMINKIKTILRRMSPLFILLVFIIAAQLLISTKEAPEQKADTAPVPIVDVTEVQQQTVSLNLPSYGVV
SPKYKTQLVTEVQGRMQSISNNFVAGGVVKKGDELAVIEPSDYEADLMQAQASLAQAQAALEEEMAKGEVAKNDWKGYDG
GIPPELGLRLPQLKQEQANVKFQQAALARAQRNLERTVIRAPFDGIIKARNVDLGQYVTLGTNLGELYDTRIAEVRLPLS
NNDLAYLESVDNPDTHVSLSADLAGRVITWQGQIVRSEGVIDAENRMVYLVAEVKDPYLRGHRAEGQLPLKYGTFVTAVI
KGRTVEGIVKLPRHLVRDNQVTIVHSDNSIELRSVNVVRTDLENVYIKDSLDNGERVSLTNLSNVEDGQIVKIVGEDSSS
NQDSQDENTEKQLANAGVQ
>Mature_419_residues
MQSDKSMHGNADQMINKIKTILRRMSPLFILLVFIIAAQLLISTKEAPEQKADTAPVPIVDVTEVQQQTVSLNLPSYGVV
SPKYKTQLVTEVQGRMQSISNNFVAGGVVKKGDELAVIEPSDYEADLMQAQASLAQAQAALEEEMAKGEVAKNDWKGYDG
GIPPELGLRLPQLKQEQANVKFQQAALARAQRNLERTVIRAPFDGIIKARNVDLGQYVTLGTNLGELYDTRIAEVRLPLS
NNDLAYLESVDNPDTHVSLSADLAGRVITWQGQIVRSEGVIDAENRMVYLVAEVKDPYLRGHRAEGQLPLKYGTFVTAVI
KGRTVEGIVKLPRHLVRDNQVTIVHSDNSIELRSVNVVRTDLENVYIKDSLDNGERVSLTNLSNVEDGQIVKIVGEDSSS
NQDSQDENTEKQLANAGVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022824
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 46122; Mature: 46122

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSDKSMHGNADQMINKIKTILRRMSPLFILLVFIIAAQLLISTKEAPEQKADTAPVPIV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEE
DVTEVQQQTVSLNLPSYGVVSPKYKTQLVTEVQGRMQSISNNFVAGGVVKKGDELAVIEP
EHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCEEECCCCEEEECC
SDYEADLMQAQASLAQAQAALEEEMAKGEVAKNDWKGYDGGIPPELGLRLPQLKQEQANV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHCC
KFQQAALARAQRNLERTVIRAPFDGIIKARNVDLGQYVTLGTNLGELYDTRIAEVRLPLS
HHHHHHHHHHHHHHHHHEEECCHHHHEEECCCCCCCEEEECCCHHHHHHCEEEEEEECCC
NNDLAYLESVDNPDTHVSLSADLAGRVITWQGQIVRSEGVIDAENRMVYLVAEVKDPYLR
CCCEEEEECCCCCCCEEEEECCCCCCEEEECCEEEECCCEEECCCCEEEEEEECCCHHHC
GHRAEGQLPLKYGTFVTAVIKGRTVEGIVKLPRHLVRDNQVTIVHSDNSIELRSVNVVRT
CCCCCCCCCEEHHHEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEE
DLENVYIKDSLDNGERVSLTNLSNVEDGQIVKIVGEDSSSNQDSQDENTEKQLANAGVQ
CCCCEEEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MQSDKSMHGNADQMINKIKTILRRMSPLFILLVFIIAAQLLISTKEAPEQKADTAPVPIV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEE
DVTEVQQQTVSLNLPSYGVVSPKYKTQLVTEVQGRMQSISNNFVAGGVVKKGDELAVIEP
EHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCEEECCCCEEEECC
SDYEADLMQAQASLAQAQAALEEEMAKGEVAKNDWKGYDGGIPPELGLRLPQLKQEQANV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHCC
KFQQAALARAQRNLERTVIRAPFDGIIKARNVDLGQYVTLGTNLGELYDTRIAEVRLPLS
HHHHHHHHHHHHHHHHHEEECCHHHHEEECCCCCCCEEEECCCHHHHHHCEEEEEEECCC
NNDLAYLESVDNPDTHVSLSADLAGRVITWQGQIVRSEGVIDAENRMVYLVAEVKDPYLR
CCCEEEEECCCCCCCEEEEECCCCCCEEEECCEEEECCCEEECCCCEEEEEEECCCHHHC
GHRAEGQLPLKYGTFVTAVIKGRTVEGIVKLPRHLVRDNQVTIVHSDNSIELRSVNVVRT
CCCCCCCCCEEHHHEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEE
DLENVYIKDSLDNGERVSLTNLSNVEDGQIVKIVGEDSSSNQDSQDENTEKQLANAGVQ
CCCCEEEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA