| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960611
Identifier: 157960611
GI number: 157960611
Start: 967539
End: 968558
Strand: Reverse
Name: 157960611
Synonym: Spea_0783
Alternate gene names: NA
Gene position: 968558-967539 (Counterclockwise)
Preceding gene: 157960614
Following gene: 157960609
Centisome position: 18.72
GC content: 37.25
Gene sequence:
>1020_bases ATGAAACCAGTTACAAATTCAAAAATTCAATCAGTTAACCTGATTACGGTGGCTATTTCAGCTGTGAGTCTCGCACTTGG TGTTGCGCTTCTAGCTAACTTTTTGACAGAGATAATTGGCGCTAATAAATTCCTACTAGCCGTTGCTGCTTTATTGATTG TAGTGTCGTTATATTTAGCTAGTAAATTTATCAACCCAAAAACTAAATACACACTGCGATTGAGAGGTGCTTACTTTTTT CAACCATTCACTTTAGAAGGCAAATCTATCATCGGTTATGAATACAATGATGATATGTCTCGCTATTTACGTGCTTTTGC ACTCGAGAATAAGGCTTATTCACGAGCTTTAGAAAAGAAGTACAAAGAATATGATACAGCGCCAACAAAGTATGATCCTG ATCAGCTGGACTACTATAACCTCGTAGCATCGTGTACAGAGTTTCTATTTTTGAGGAAGCTTGGCTTGCATCTAGGGTCA TATTTTGTACATGAAGGAGTTGATAAGTCTAAAATTAAAAGCATCCCAAGAGACTGCATGTCTAAGGAAATCTTACGTAA CCGAGTATTAGAATTAATTACTAGAAATCACCAAGAACGAGCAGCTTTCTGTGATTATGATGATGAAGGAGGTACCTCTA TATTATGTTCGGCTACCGGGCAAGGAGGTGAAATATTCGATCGATTAGTACTGGAACTGCCAACTGGTGCTGAATTAAAA CGTTTATCAGACAACTCTCTTCTAATTTCAAGTGATGTGTTTGAGATTCGGTTCTTTGTCCATTGTGGTGCTATCAATGC ATATATACCTACTGAACTGCTACCTGGTGAATATGACTCGCCTTGGTTATCTAATGTAAAACTAGAGGTTTTGATTAAGA AGCGTTTATTTTTAGGTACCGAAAAAGTCGAACTACATCAATGGTTGGATTCATTTTTGAACGAATTCCAAGACTATTTC AGTACCAAGCAACTTAAAGAGCGCTCGCACTTACAAGTCGTGCGTATATTAAAATCTTAA
Upstream 100 bases:
>100_bases GTAGATTTGAAAAATGCGTATTCACATTATTACTAGCCTAATGTAGTTAGCCGCATCCCCACTATACAAGTGTTAGGAAT TTCAATTTAGTAAGGTAATC
Downstream 100 bases:
>100_bases CGCATTTAAGACAGGCTCCCCCCCCTTGGTATTTCCAGTTTAGAGCAGCGTTGGTGTTTACGGTTAAAAGAACAAATTGG AATAAATAGGTCAGAGTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKPVTNSKIQSVNLITVAISAVSLALGVALLANFLTEIIGANKFLLAVAALLIVVSLYLASKFINPKTKYTLRLRGAYFF QPFTLEGKSIIGYEYNDDMSRYLRAFALENKAYSRALEKKYKEYDTAPTKYDPDQLDYYNLVASCTEFLFLRKLGLHLGS YFVHEGVDKSKIKSIPRDCMSKEILRNRVLELITRNHQERAAFCDYDDEGGTSILCSATGQGGEIFDRLVLELPTGAELK RLSDNSLLISSDVFEIRFFVHCGAINAYIPTELLPGEYDSPWLSNVKLEVLIKKRLFLGTEKVELHQWLDSFLNEFQDYF STKQLKERSHLQVVRILKS
Sequences:
>Translated_339_residues MKPVTNSKIQSVNLITVAISAVSLALGVALLANFLTEIIGANKFLLAVAALLIVVSLYLASKFINPKTKYTLRLRGAYFF QPFTLEGKSIIGYEYNDDMSRYLRAFALENKAYSRALEKKYKEYDTAPTKYDPDQLDYYNLVASCTEFLFLRKLGLHLGS YFVHEGVDKSKIKSIPRDCMSKEILRNRVLELITRNHQERAAFCDYDDEGGTSILCSATGQGGEIFDRLVLELPTGAELK RLSDNSLLISSDVFEIRFFVHCGAINAYIPTELLPGEYDSPWLSNVKLEVLIKKRLFLGTEKVELHQWLDSFLNEFQDYF STKQLKERSHLQVVRILKS >Mature_339_residues MKPVTNSKIQSVNLITVAISAVSLALGVALLANFLTEIIGANKFLLAVAALLIVVSLYLASKFINPKTKYTLRLRGAYFF QPFTLEGKSIIGYEYNDDMSRYLRAFALENKAYSRALEKKYKEYDTAPTKYDPDQLDYYNLVASCTEFLFLRKLGLHLGS YFVHEGVDKSKIKSIPRDCMSKEILRNRVLELITRNHQERAAFCDYDDEGGTSILCSATGQGGEIFDRLVLELPTGAELK RLSDNSLLISSDVFEIRFFVHCGAINAYIPTELLPGEYDSPWLSNVKLEVLIKKRLFLGTEKVELHQWLDSFLNEFQDYF STKQLKERSHLQVVRILKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38591; Mature: 38591
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVTNSKIQSVNLITVAISAVSLALGVALLANFLTEIIGANKFLLAVAALLIVVSLYLA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SKFINPKTKYTLRLRGAYFFQPFTLEGKSIIGYEYNDDMSRYLRAFALENKAYSRALEKK HHHCCCCCEEEEEECCEEEECCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH YKEYDTAPTKYDPDQLDYYNLVASCTEFLFLRKLGLHLGSYFVHEGVDKSKIKSIPRDCM HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SKEILRNRVLELITRNHQERAAFCDYDDEGGTSILCSATGQGGEIFDRLVLELPTGAELK HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHH RLSDNSLLISSDVFEIRFFVHCGAINAYIPTELLPGEYDSPWLSNVKLEVLIKKRLFLGT HCCCCCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCC EKVELHQWLDSFLNEFQDYFSTKQLKERSHLQVVRILKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKPVTNSKIQSVNLITVAISAVSLALGVALLANFLTEIIGANKFLLAVAALLIVVSLYLA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SKFINPKTKYTLRLRGAYFFQPFTLEGKSIIGYEYNDDMSRYLRAFALENKAYSRALEKK HHHCCCCCEEEEEECCEEEECCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH YKEYDTAPTKYDPDQLDYYNLVASCTEFLFLRKLGLHLGSYFVHEGVDKSKIKSIPRDCM HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SKEILRNRVLELITRNHQERAAFCDYDDEGGTSILCSATGQGGEIFDRLVLELPTGAELK HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHH RLSDNSLLISSDVFEIRFFVHCGAINAYIPTELLPGEYDSPWLSNVKLEVLIKKRLFLGT HCCCCCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCC EKVELHQWLDSFLNEFQDYFSTKQLKERSHLQVVRILKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA