Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960609

Identifier: 157960609

GI number: 157960609

Start: 965349

End: 965885

Strand: Reverse

Name: 157960609

Synonym: Spea_0781

Alternate gene names: NA

Gene position: 965885-965349 (Counterclockwise)

Preceding gene: 157960611

Following gene: 157960606

Centisome position: 18.67

GC content: 41.71

Gene sequence:

>537_bases
ATGAAATACTTACTAATGACAGCAGTGATCACCGCGACATTAACAATAGCTGGTTGTGCCCAACAACAGGAATCAACTGA
GCCGCAAAATTTTCTTACCAATGATGGTAATGTAAACATTCTTTGGCAAAACCCTAGTGACTATAGCGATATCGAAGCAA
CCACGGGAGTACAGTCGAAATTTGAACAATACCTTTTTACTGAGCTTACCGACGAGCTAGCAAAACTGGCTAATAAGCAC
TTAACTAAAGACCAACAGCTAGACCTGACCGTCACCAACGTCGATCTCGCTGGTGATGTACAGCCGACTTTTGGTGGCGC
AACTGACGATATTCGCATTGTTACCGATCTGTACCCACCAAAAATACGTTTTGATTATGTGTTAACACAAAATGGAAAAG
TCATAAAATCGGGAAGTGAAAAGCTTAATAACATGGGATTTCTAATGGGTATCCAGCCCATAGGAAACGACCCTTTCCCC
TACGAGCAAGACCTACTCACCGATTGGTTTAAAAGTACAATCGTGCCAGTATTATAA

Upstream 100 bases:

>100_bases
TGATTGCCTAAGTCGTTAGGCGTAGTCTAATAAACCCCAAATTCGCAATATCAGAGAACTGAGTTATAAATAGTTAAGCC
TGAAATCTAACGGAGCCGAT

Downstream 100 bases:

>100_bases
TTATGCAGTTCTAGGCTAACGCCGCGCAGTAACACCTATCGCGGCAGTCTTAGTTATTTCAAAGCACTGCTGTAGAAACT
GCGAATTTTGAAACTGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKYLLMTAVITATLTIAGCAQQQESTEPQNFLTNDGNVNILWQNPSDYSDIEATTGVQSKFEQYLFTELTDELAKLANKH
LTKDQQLDLTVTNVDLAGDVQPTFGGATDDIRIVTDLYPPKIRFDYVLTQNGKVIKSGSEKLNNMGFLMGIQPIGNDPFP
YEQDLLTDWFKSTIVPVL

Sequences:

>Translated_178_residues
MKYLLMTAVITATLTIAGCAQQQESTEPQNFLTNDGNVNILWQNPSDYSDIEATTGVQSKFEQYLFTELTDELAKLANKH
LTKDQQLDLTVTNVDLAGDVQPTFGGATDDIRIVTDLYPPKIRFDYVLTQNGKVIKSGSEKLNNMGFLMGIQPIGNDPFP
YEQDLLTDWFKSTIVPVL
>Mature_178_residues
MKYLLMTAVITATLTIAGCAQQQESTEPQNFLTNDGNVNILWQNPSDYSDIEATTGVQSKFEQYLFTELTDELAKLANKH
LTKDQQLDLTVTNVDLAGDVQPTFGGATDDIRIVTDLYPPKIRFDYVLTQNGKVIKSGSEKLNNMGFLMGIQPIGNDPFP
YEQDLLTDWFKSTIVPVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19857; Mature: 19857

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLLMTAVITATLTIAGCAQQQESTEPQNFLTNDGNVNILWQNPSDYSDIEATTGVQSK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCCCHHHCCHHHH
FEQYLFTELTDELAKLANKHLTKDQQLDLTVTNVDLAGDVQPTFGGATDDIRIVTDLYPP
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCC
KIRFDYVLTQNGKVIKSGSEKLNNMGFLMGIQPIGNDPFPYEQDLLTDWFKSTIVPVL
CEEEEEEEECCCEEEECCHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKYLLMTAVITATLTIAGCAQQQESTEPQNFLTNDGNVNILWQNPSDYSDIEATTGVQSK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCCCHHHCCHHHH
FEQYLFTELTDELAKLANKHLTKDQQLDLTVTNVDLAGDVQPTFGGATDDIRIVTDLYPP
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCC
KIRFDYVLTQNGKVIKSGSEKLNNMGFLMGIQPIGNDPFPYEQDLLTDWFKSTIVPVL
CEEEEEEEECCCEEEECCHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA