| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960540
Identifier: 157960540
GI number: 157960540
Start: 874636
End: 875814
Strand: Reverse
Name: 157960540
Synonym: Spea_0712
Alternate gene names: NA
Gene position: 875814-874636 (Counterclockwise)
Preceding gene: 157960541
Following gene: 157960539
Centisome position: 16.93
GC content: 46.06
Gene sequence:
>1179_bases ATGATGATGAAAAAAACCTTACTTGCCACAGCGCTAGTTGGCATGTTCGCGTCTCAAGGTGCTGTCGCGGCAGATGATTC TGCTGAGCTACGAAAAATTATTGAGCAACAACAGAAAGTTCTTCAAGACCTAGAGAAGCGTCTAGATGAAACAGAGAAGC GCGTTGAAAAAACCGCTGACGTCGTTGAAGAATCGGCAAGTGAGTCAAAGAGCGCGACGACTATCGGTGGTTATGGTGAA CTACACTACAACAACATCACTGATAACAAGTCTGGCAAAGATAAGAAAGCTATCGATTTTCACCGTTTTGTATTGTTCTT CGGTCATGAGTTTACCGAAAGCACACGTTTCTTCTCTGAGGTTGAAATTGAGCACGCACTTTCTGGTGACGATAAGCCAG GCGAAGTTGAGCTAGAGCAAGCGTATATCGAGCATGATTTCAATGAGATGTTTACCGGTAAAGCGGGTCTGTTCCTAGTA CCAGTCGGTATTATTAACGAAACTCATGAGCCACCAACCTTCTACGGTGTTGAGCGTAACCCTGTTGAGAAAAACATCTT GCCTGCAACTTGGTGGGAAGCGGGTGCGGCACTTAATGTTAAAGCCTCTCCAGGTTTAGCATTCGACGGTGCTATCACAT CAGGCCTTAAGGTTGATGAAACTTATAACATCCGTGGCGGCCGTCAAAAAGTGGCTAAAGCTGATGCGTCAGACCTTGCC TATACTGCTCGTGTTAAGTACACAGGCGTAACAGGTCTAGAGCTAGCCGCTACTGCCCAGTACCAGTCAGATCTAACTCA AAGCAAAGCGGGTGTCGATACGGCTTCGGCAACTTTGCTAACTGCTCACGCAATTTACTCAATCCAAGGTTTCACGGTTA AAGCGCTTTACGCTCAGTGGGACATCGACGGTAAAGAAGCTGAAGCATTAGGTCGTGATGAGCAAAACGGTTGGTACATT GAACCATCTTACCGCATCAATGAAAGCTTTGGTGTGTTTGCTCGCTACAACGAGTACGACAACAATGCAGGCAATAGTGA AGACACTAAAGTCGAGCAAACCAACCTAGGTATCAACTACTGGTTGCATGAGAATGTGGTATTTAAAGCTGACTATGAAA AAGTGGGCGGCGCTAAAGACGCTGACGGCTTTAACTTAGGCGTGGGTTACCAGTTCTAA
Upstream 100 bases:
>100_bases GATCTTTATCAAAAAAGGTAATGATAACGATTTGCATTATCGACATCACTTGTTAGAATTCAGCCAAATTTAGCAACCCT TAAATAACAACAGGGAAAGA
Downstream 100 bases:
>100_bases GCTAAGCTTAAGCAACAGTACTTAAGCAATAGGGTGAGTGCCCAGTTTGGGCACTTATCTGTCTCCCGAGCCAACAGGCT CTACTTATAACATTACCCCG
Product: phosphate-selective porin O and P
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MMMKKTLLATALVGMFASQGAVAADDSAELRKIIEQQQKVLQDLEKRLDETEKRVEKTADVVEESASESKSATTIGGYGE LHYNNITDNKSGKDKKAIDFHRFVLFFGHEFTESTRFFSEVEIEHALSGDDKPGEVELEQAYIEHDFNEMFTGKAGLFLV PVGIINETHEPPTFYGVERNPVEKNILPATWWEAGAALNVKASPGLAFDGAITSGLKVDETYNIRGGRQKVAKADASDLA YTARVKYTGVTGLELAATAQYQSDLTQSKAGVDTASATLLTAHAIYSIQGFTVKALYAQWDIDGKEAEALGRDEQNGWYI EPSYRINESFGVFARYNEYDNNAGNSEDTKVEQTNLGINYWLHENVVFKADYEKVGGAKDADGFNLGVGYQF
Sequences:
>Translated_392_residues MMMKKTLLATALVGMFASQGAVAADDSAELRKIIEQQQKVLQDLEKRLDETEKRVEKTADVVEESASESKSATTIGGYGE LHYNNITDNKSGKDKKAIDFHRFVLFFGHEFTESTRFFSEVEIEHALSGDDKPGEVELEQAYIEHDFNEMFTGKAGLFLV PVGIINETHEPPTFYGVERNPVEKNILPATWWEAGAALNVKASPGLAFDGAITSGLKVDETYNIRGGRQKVAKADASDLA YTARVKYTGVTGLELAATAQYQSDLTQSKAGVDTASATLLTAHAIYSIQGFTVKALYAQWDIDGKEAEALGRDEQNGWYI EPSYRINESFGVFARYNEYDNNAGNSEDTKVEQTNLGINYWLHENVVFKADYEKVGGAKDADGFNLGVGYQF >Mature_392_residues MMMKKTLLATALVGMFASQGAVAADDSAELRKIIEQQQKVLQDLEKRLDETEKRVEKTADVVEESASESKSATTIGGYGE LHYNNITDNKSGKDKKAIDFHRFVLFFGHEFTESTRFFSEVEIEHALSGDDKPGEVELEQAYIEHDFNEMFTGKAGLFLV PVGIINETHEPPTFYGVERNPVEKNILPATWWEAGAALNVKASPGLAFDGAITSGLKVDETYNIRGGRQKVAKADASDLA YTARVKYTGVTGLELAATAQYQSDLTQSKAGVDTASATLLTAHAIYSIQGFTVKALYAQWDIDGKEAEALGRDEQNGWYI EPSYRINESFGVFARYNEYDNNAGNSEDTKVEQTNLGINYWLHENVVFKADYEKVGGAKDADGFNLGVGYQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43278; Mature: 43278
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMKKTLLATALVGMFASQGAVAADDSAELRKIIEQQQKVLQDLEKRLDETEKRVEKTAD CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVEESASESKSATTIGGYGELHYNNITDNKSGKDKKAIDFHRFVLFFGHEFTESTRFFSE HHHHHHHCCCCCEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH VEIEHALSGDDKPGEVELEQAYIEHDFNEMFTGKAGLFLVPVGIINETHEPPTFYGVERN HHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCCEECCCCC PVEKNILPATWWEAGAALNVKASPGLAFDGAITSGLKVDETYNIRGGRQKVAKADASDLA CCCCCCCCCCHHCCCCEEEEECCCCEEECCCCCCCEEECCEECCCCCHHHHHHCCCCCCE YTARVKYTGVTGLELAATAQYQSDLTQSKAGVDTASATLLTAHAIYSIQGFTVKALYAQW EEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCEEEEEEEEE DIDGKEAEALGRDEQNGWYIEPSYRINESFGVFARYNEYDNNAGNSEDTKVEQTNLGINY CCCCHHHHHCCCCCCCCEEECCCEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEE WLHENVVFKADYEKVGGAKDADGFNLGVGYQF EEECCEEEEECHHHCCCCCCCCCCEECCCCCC >Mature Secondary Structure MMMKKTLLATALVGMFASQGAVAADDSAELRKIIEQQQKVLQDLEKRLDETEKRVEKTAD CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVEESASESKSATTIGGYGELHYNNITDNKSGKDKKAIDFHRFVLFFGHEFTESTRFFSE HHHHHHHCCCCCEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH VEIEHALSGDDKPGEVELEQAYIEHDFNEMFTGKAGLFLVPVGIINETHEPPTFYGVERN HHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCCEECCCCC PVEKNILPATWWEAGAALNVKASPGLAFDGAITSGLKVDETYNIRGGRQKVAKADASDLA CCCCCCCCCCHHCCCCEEEEECCCCEEECCCCCCCEEECCEECCCCCHHHHHHCCCCCCE YTARVKYTGVTGLELAATAQYQSDLTQSKAGVDTASATLLTAHAIYSIQGFTVKALYAQW EEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCEEEEEEEEE DIDGKEAEALGRDEQNGWYIEPSYRINESFGVFARYNEYDNNAGNSEDTKVEQTNLGINY CCCCHHHHHCCCCCCCCEEECCCEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEE WLHENVVFKADYEKVGGAKDADGFNLGVGYQF EEECCEEEEECHHHCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]