Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157960504

Identifier: 157960504

GI number: 157960504

Start: 836524

End: 837237

Strand: Reverse

Name: 157960504

Synonym: Spea_0676

Alternate gene names: NA

Gene position: 837237-836524 (Counterclockwise)

Preceding gene: 157960505

Following gene: 157960503

Centisome position: 16.18

GC content: 41.18

Gene sequence:

>714_bases
ATGGAAGATAAATTGCGAGAGCAATCAATGCAGTATGATCTGCACCGCTTAGCGGTAATGTTGATTTTTCTCGGAGCAGT
AATAGCAGTAACGGGCGTCTCTTTATCTGTGTGGTTTGAATTTCAAAAAATTGGTTTCGAGGTGATAAACAAGCGAGCAG
ATTTACTAGGTGATTACACTTACACTCGCTACGCCTTTATTTACAACATGTCTCTAATGGTAGCGGGGTTATGCATCCTG
CTATCCATGATTACTTTATTCCTACTAAAGCTAGGGTACTTTAGCCGGTATTTATCATATATAGGGATATGGGTAGGCTC
TTGCGTGGTTCTGATGGGAATTTTCCCTATCAACTACTTAGAAACTCACCGACTGATTTCAACCGGCTTCTTAGTCGGGA
CCCTTGTCATGTATTTTCTCTGTATCATCGCTAAGTTTAAGGATAATTCAGCTTTTAGCTGGCCGGTTTTTTTTATCAGT
GTTTTAGGCTTTATCGCATCATCATGGCTGGTTTTTCAGTTAAACTGGCATACCTTAGACTTCAAGCCATGCGACAAACA
TTATCCCCAAGCGAGTTACTGCTGGATAGCCATTACTCTCTGGGCACAAACCAATATTGTGTTGTTCTGGTGTCTTGCCC
ACGCATGGAGCATACGCCAAATGGCCATCAATGATTACCGTGAACTCACACAGAAATATTTAGCTAAAGAATAA

Upstream 100 bases:

>100_bases
AGTTCTGACTCAACGCATTCTATAATCAAGGAGTACATGAATATGTACTCCTTTTTTTGGGGCTAAATGAATAGCAATCA
CAATCGAAACCGGAACTGGC

Downstream 100 bases:

>100_bases
CAGCCACAATTAATGAGACTCGCAAAATACCTTGCCTTAACCGGCTGCTGTTCACGTCGCGCCGCGACCCGCTTAATCAG
AGACGGCTTAGTTCGTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MEDKLREQSMQYDLHRLAVMLIFLGAVIAVTGVSLSVWFEFQKIGFEVINKRADLLGDYTYTRYAFIYNMSLMVAGLCIL
LSMITLFLLKLGYFSRYLSYIGIWVGSCVVLMGIFPINYLETHRLISTGFLVGTLVMYFLCIIAKFKDNSAFSWPVFFIS
VLGFIASSWLVFQLNWHTLDFKPCDKHYPQASYCWIAITLWAQTNIVLFWCLAHAWSIRQMAINDYRELTQKYLAKE

Sequences:

>Translated_237_residues
MEDKLREQSMQYDLHRLAVMLIFLGAVIAVTGVSLSVWFEFQKIGFEVINKRADLLGDYTYTRYAFIYNMSLMVAGLCIL
LSMITLFLLKLGYFSRYLSYIGIWVGSCVVLMGIFPINYLETHRLISTGFLVGTLVMYFLCIIAKFKDNSAFSWPVFFIS
VLGFIASSWLVFQLNWHTLDFKPCDKHYPQASYCWIAITLWAQTNIVLFWCLAHAWSIRQMAINDYRELTQKYLAKE
>Mature_237_residues
MEDKLREQSMQYDLHRLAVMLIFLGAVIAVTGVSLSVWFEFQKIGFEVINKRADLLGDYTYTRYAFIYNMSLMVAGLCIL
LSMITLFLLKLGYFSRYLSYIGIWVGSCVVLMGIFPINYLETHRLISTGFLVGTLVMYFLCIIAKFKDNSAFSWPVFFIS
VLGFIASSWLVFQLNWHTLDFKPCDKHYPQASYCWIAITLWAQTNIVLFWCLAHAWSIRQMAINDYRELTQKYLAKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27592; Mature: 27592

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDKLREQSMQYDLHRLAVMLIFLGAVIAVTGVSLSVWFEFQKIGFEVINKRADLLGDYT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
YTRYAFIYNMSLMVAGLCILLSMITLFLLKLGYFSRYLSYIGIWVGSCVVLMGIFPINYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
ETHRLISTGFLVGTLVMYFLCIIAKFKDNSAFSWPVFFISVLGFIASSWLVFQLNWHTLD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEEC
FKPCDKHYPQASYCWIAITLWAQTNIVLFWCLAHAWSIRQMAINDYRELTQKYLAKE
CCCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEDKLREQSMQYDLHRLAVMLIFLGAVIAVTGVSLSVWFEFQKIGFEVINKRADLLGDYT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
YTRYAFIYNMSLMVAGLCILLSMITLFLLKLGYFSRYLSYIGIWVGSCVVLMGIFPINYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
ETHRLISTGFLVGTLVMYFLCIIAKFKDNSAFSWPVFFISVLGFIASSWLVFQLNWHTLD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEEC
FKPCDKHYPQASYCWIAITLWAQTNIVLFWCLAHAWSIRQMAINDYRELTQKYLAKE
CCCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA