| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960504
Identifier: 157960504
GI number: 157960504
Start: 836524
End: 837237
Strand: Reverse
Name: 157960504
Synonym: Spea_0676
Alternate gene names: NA
Gene position: 837237-836524 (Counterclockwise)
Preceding gene: 157960505
Following gene: 157960503
Centisome position: 16.18
GC content: 41.18
Gene sequence:
>714_bases ATGGAAGATAAATTGCGAGAGCAATCAATGCAGTATGATCTGCACCGCTTAGCGGTAATGTTGATTTTTCTCGGAGCAGT AATAGCAGTAACGGGCGTCTCTTTATCTGTGTGGTTTGAATTTCAAAAAATTGGTTTCGAGGTGATAAACAAGCGAGCAG ATTTACTAGGTGATTACACTTACACTCGCTACGCCTTTATTTACAACATGTCTCTAATGGTAGCGGGGTTATGCATCCTG CTATCCATGATTACTTTATTCCTACTAAAGCTAGGGTACTTTAGCCGGTATTTATCATATATAGGGATATGGGTAGGCTC TTGCGTGGTTCTGATGGGAATTTTCCCTATCAACTACTTAGAAACTCACCGACTGATTTCAACCGGCTTCTTAGTCGGGA CCCTTGTCATGTATTTTCTCTGTATCATCGCTAAGTTTAAGGATAATTCAGCTTTTAGCTGGCCGGTTTTTTTTATCAGT GTTTTAGGCTTTATCGCATCATCATGGCTGGTTTTTCAGTTAAACTGGCATACCTTAGACTTCAAGCCATGCGACAAACA TTATCCCCAAGCGAGTTACTGCTGGATAGCCATTACTCTCTGGGCACAAACCAATATTGTGTTGTTCTGGTGTCTTGCCC ACGCATGGAGCATACGCCAAATGGCCATCAATGATTACCGTGAACTCACACAGAAATATTTAGCTAAAGAATAA
Upstream 100 bases:
>100_bases AGTTCTGACTCAACGCATTCTATAATCAAGGAGTACATGAATATGTACTCCTTTTTTTGGGGCTAAATGAATAGCAATCA CAATCGAAACCGGAACTGGC
Downstream 100 bases:
>100_bases CAGCCACAATTAATGAGACTCGCAAAATACCTTGCCTTAACCGGCTGCTGTTCACGTCGCGCCGCGACCCGCTTAATCAG AGACGGCTTAGTTCGTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MEDKLREQSMQYDLHRLAVMLIFLGAVIAVTGVSLSVWFEFQKIGFEVINKRADLLGDYTYTRYAFIYNMSLMVAGLCIL LSMITLFLLKLGYFSRYLSYIGIWVGSCVVLMGIFPINYLETHRLISTGFLVGTLVMYFLCIIAKFKDNSAFSWPVFFIS VLGFIASSWLVFQLNWHTLDFKPCDKHYPQASYCWIAITLWAQTNIVLFWCLAHAWSIRQMAINDYRELTQKYLAKE
Sequences:
>Translated_237_residues MEDKLREQSMQYDLHRLAVMLIFLGAVIAVTGVSLSVWFEFQKIGFEVINKRADLLGDYTYTRYAFIYNMSLMVAGLCIL LSMITLFLLKLGYFSRYLSYIGIWVGSCVVLMGIFPINYLETHRLISTGFLVGTLVMYFLCIIAKFKDNSAFSWPVFFIS VLGFIASSWLVFQLNWHTLDFKPCDKHYPQASYCWIAITLWAQTNIVLFWCLAHAWSIRQMAINDYRELTQKYLAKE >Mature_237_residues MEDKLREQSMQYDLHRLAVMLIFLGAVIAVTGVSLSVWFEFQKIGFEVINKRADLLGDYTYTRYAFIYNMSLMVAGLCIL LSMITLFLLKLGYFSRYLSYIGIWVGSCVVLMGIFPINYLETHRLISTGFLVGTLVMYFLCIIAKFKDNSAFSWPVFFIS VLGFIASSWLVFQLNWHTLDFKPCDKHYPQASYCWIAITLWAQTNIVLFWCLAHAWSIRQMAINDYRELTQKYLAKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27592; Mature: 27592
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKLREQSMQYDLHRLAVMLIFLGAVIAVTGVSLSVWFEFQKIGFEVINKRADLLGDYT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHH YTRYAFIYNMSLMVAGLCILLSMITLFLLKLGYFSRYLSYIGIWVGSCVVLMGIFPINYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH ETHRLISTGFLVGTLVMYFLCIIAKFKDNSAFSWPVFFISVLGFIASSWLVFQLNWHTLD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEEC FKPCDKHYPQASYCWIAITLWAQTNIVLFWCLAHAWSIRQMAINDYRELTQKYLAKE CCCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEDKLREQSMQYDLHRLAVMLIFLGAVIAVTGVSLSVWFEFQKIGFEVINKRADLLGDYT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHH YTRYAFIYNMSLMVAGLCILLSMITLFLLKLGYFSRYLSYIGIWVGSCVVLMGIFPINYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH ETHRLISTGFLVGTLVMYFLCIIAKFKDNSAFSWPVFFISVLGFIASSWLVFQLNWHTLD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEEC FKPCDKHYPQASYCWIAITLWAQTNIVLFWCLAHAWSIRQMAINDYRELTQKYLAKE CCCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA