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The map label for this gene is oruR [H]

Identifier: 157960445

GI number: 157960445

Start: 760002

End: 761036

Strand: Reverse

Name: oruR [H]

Synonym: Spea_0616

Alternate gene names: 157960445

Gene position: 761036-760002 (Counterclockwise)

Preceding gene: 157960448

Following gene: 157960444

Centisome position: 14.71

GC content: 45.7

Gene sequence:

>1035_bases
ATGACTTTAAAAGACAAAGGCAAGTTAACAGATGAGTCGACGACCATCGCATCTTGGGCTCTAGCCGTATGCCGAACCAT
TGATTCAACGGGGGTCGATAGTCAACACATACTCAATGAACTAGGCATCGACAAAGCTCTGCTGCATGACCCCAATGCAC
GGCTACTCACACAGCAAATGACCCAATTATGGCGACGAGCAGTGACAACGAGCGGTGACGAAGCCATTGGCCTAAAAGTC
GCCAACTTTGTGCAACCTACCAGCTTTAACGCATTGAGTTTTTCACTGCTGGTAAGCGAATCTTTAGAAGATGCCTGGTC
TAGAATAAAGCGTTATTACACCATAATCAGTAATGTGCTTGAGATGGATATAGAGCGTGGTGAGTGTGAGTCTGCGCTGT
GCTTTAATAAGATTATGGGGAATCACTACGCCGATGAAGCTATCGATGCTTTTATGGCTACCAGTTACCTTATGGCCCTG
CAAACCAGTCATGGCCAAATAACGCCCATACGACTAGAGCTTGAACGCCGAGAGCCCTTCGACTCACAACCTTTTAGCAC
ATTGTTTTGTTGCCCTGTGAAGTTTTCGGCAGGCCACAACAAGATCTTCTATTCAAACCGAGACCTTGGCTTACCTTTCC
CCTCTGCCAATAGAGAGCTTGCCTTAAAAAATGATGAGGCGATACAAGCCTATTTCCAATCCATTGTGAGTCAACCTTTT
AGCCAAAGAGTCTCTAAAGAAATCAGCATTGCCATGACGCTAGGTAACCCAGATAGAGATGCCATTGCTAAGGCATTTCA
TATGAGCAGCCGCAATTTACAACGAAAACTGCGTGAGGAAGGTACCTCTTTTAGCGAGCAAGTCGAACAGCTCAGAAAAG
ATTTGGCACAAAAATATCTAGCGACCCCTCAGCTCTCAATGCTAGAGATCGCGTTTCGGCTAGGCTTTAAAGATCCGAGT
AATTTTACCCGAGCGTTTAAGCGCTGGTATGGGGTGTCGCCATTGCAATATCGACAGAAAAACAACCCTAAATAA

Upstream 100 bases:

>100_bases
ACGCTATTACATTCGAATAGGATAAAGATTGAGCTTAAGTAGCATTATTTGTAACCTAAACCAAGCGAACAGTGATTTAT
GGTCGGATTGAGACAGATTT

Downstream 100 bases:

>100_bases
TTGCTATCTATTGATAACAAACCCGAAATTTCAATAGATTAAACTACTTTTATCGGCGCGATGTCACTTGCTATCATCCT
ATTTTCAGGTAACGTTAGAG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTLKDKGKLTDESTTIASWALAVCRTIDSTGVDSQHILNELGIDKALLHDPNARLLTQQMTQLWRRAVTTSGDEAIGLKV
ANFVQPTSFNALSFSLLVSESLEDAWSRIKRYYTIISNVLEMDIERGECESALCFNKIMGNHYADEAIDAFMATSYLMAL
QTSHGQITPIRLELERREPFDSQPFSTLFCCPVKFSAGHNKIFYSNRDLGLPFPSANRELALKNDEAIQAYFQSIVSQPF
SQRVSKEISIAMTLGNPDRDAIAKAFHMSSRNLQRKLREEGTSFSEQVEQLRKDLAQKYLATPQLSMLEIAFRLGFKDPS
NFTRAFKRWYGVSPLQYRQKNNPK

Sequences:

>Translated_344_residues
MTLKDKGKLTDESTTIASWALAVCRTIDSTGVDSQHILNELGIDKALLHDPNARLLTQQMTQLWRRAVTTSGDEAIGLKV
ANFVQPTSFNALSFSLLVSESLEDAWSRIKRYYTIISNVLEMDIERGECESALCFNKIMGNHYADEAIDAFMATSYLMAL
QTSHGQITPIRLELERREPFDSQPFSTLFCCPVKFSAGHNKIFYSNRDLGLPFPSANRELALKNDEAIQAYFQSIVSQPF
SQRVSKEISIAMTLGNPDRDAIAKAFHMSSRNLQRKLREEGTSFSEQVEQLRKDLAQKYLATPQLSMLEIAFRLGFKDPS
NFTRAFKRWYGVSPLQYRQKNNPK
>Mature_343_residues
TLKDKGKLTDESTTIASWALAVCRTIDSTGVDSQHILNELGIDKALLHDPNARLLTQQMTQLWRRAVTTSGDEAIGLKVA
NFVQPTSFNALSFSLLVSESLEDAWSRIKRYYTIISNVLEMDIERGECESALCFNKIMGNHYADEAIDAFMATSYLMALQ
TSHGQITPIRLELERREPFDSQPFSTLFCCPVKFSAGHNKIFYSNRDLGLPFPSANRELALKNDEAIQAYFQSIVSQPFS
QRVSKEISIAMTLGNPDRDAIAKAFHMSSRNLQRKLREEGTSFSEQVEQLRKDLAQKYLATPQLSMLEIAFRLGFKDPSN
FTRAFKRWYGVSPLQYRQKNNPK

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39017; Mature: 38886

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKDKGKLTDESTTIASWALAVCRTIDSTGVDSQHILNELGIDKALLHDPNARLLTQQM
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCCHHHHHHHH
TQLWRRAVTTSGDEAIGLKVANFVQPTSFNALSFSLLVSESLEDAWSRIKRYYTIISNVL
HHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMDIERGECESALCFNKIMGNHYADEAIDAFMATSYLMALQTSHGQITPIRLELERREPF
HHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCC
DSQPFSTLFCCPVKFSAGHNKIFYSNRDLGLPFPSANRELALKNDEAIQAYFQSIVSQPF
CCCCCCEEEEECEEECCCCCEEEECCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCHH
SQRVSKEISIAMTLGNPDRDAIAKAFHMSSRNLQRKLREEGTSFSEQVEQLRKDLAQKYL
HHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ATPQLSMLEIAFRLGFKDPSNFTRAFKRWYGVSPLQYRQKNNPK
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCCC
>Mature Secondary Structure 
TLKDKGKLTDESTTIASWALAVCRTIDSTGVDSQHILNELGIDKALLHDPNARLLTQQM
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCCHHHHHHHH
TQLWRRAVTTSGDEAIGLKVANFVQPTSFNALSFSLLVSESLEDAWSRIKRYYTIISNVL
HHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMDIERGECESALCFNKIMGNHYADEAIDAFMATSYLMALQTSHGQITPIRLELERREPF
HHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCC
DSQPFSTLFCCPVKFSAGHNKIFYSNRDLGLPFPSANRELALKNDEAIQAYFQSIVSQPF
CCCCCCEEEEECEEECCCCCEEEECCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCHH
SQRVSKEISIAMTLGNPDRDAIAKAFHMSSRNLQRKLREEGTSFSEQVEQLRKDLAQKYL
HHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ATPQLSMLEIAFRLGFKDPSNFTRAFKRWYGVSPLQYRQKNNPK
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]