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The map label for this gene is 157825821

Identifier: 157825821

GI number: 157825821

Start: 682576

End: 682824

Strand: Direct

Name: 157825821

Synonym: A1C_03790

Alternate gene names: NA

Gene position: 682576-682824 (Clockwise)

Preceding gene: 157825820

Following gene: 157825822

Centisome position: 55.45

GC content: 29.32

Gene sequence:

>249_bases
ATGGTTACTAAGAATTATTTAATAGATAAAGTACATGAGAAGCTGAATTATCTTGCCAAAGAAGATGTTAAAGATTCAGT
AGATTTAATCTTAGATTATTTAAGTCGGTCTCTCAAAGAACAAGAGCGTATCGAGATTAGAAATTTTTGTAACTTCTCCA
TCCGCAAACGCAAATTCCCTAAAAGCAATAAATTCTATAATATTGTTTATTACAGAATGCCTAAAAGTTTATTTCACTAT
ACAGAGTAG

Upstream 100 bases:

>100_bases
GAAAACCAAAATTAATGGACATAATATTTGAAGATTTTGATAGTATATCACCTAGTTTTTTTTAAAATAGTTTTAATGGA
ATCAAAGCAATTGTTTAATA

Downstream 100 bases:

>100_bases
ATACGGAATGGTCTAAATATAGTGTTATAGAGAAGTGGAAAATAATAAAAAGCATTGTACTACATAATAATATTGTGTAC
ATAGCTCTTTATATTGAAGA

Product: integration host factor beta-subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MVTKNYLIDKVHEKLNYLAKEDVKDSVDLILDYLSRSLKEQERIEIRNFCNFSIRKRKFPKSNKFYNIVYYRMPKSLFHY
TE

Sequences:

>Translated_82_residues
MVTKNYLIDKVHEKLNYLAKEDVKDSVDLILDYLSRSLKEQERIEIRNFCNFSIRKRKFPKSNKFYNIVYYRMPKSLFHY
TE
>Mature_82_residues
MVTKNYLIDKVHEKLNYLAKEDVKDSVDLILDYLSRSLKEQERIEIRNFCNFSIRKRKFPKSNKFYNIVYYRMPKSLFHY
TE

Specific function: Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions [H]

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial histone-like protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000119
- InterPro:   IPR010992 [H]

Pfam domain/function: PF00216 Bac_DNA_binding [H]

EC number: NA

Molecular weight: Translated: 10116; Mature: 10116

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTKNYLIDKVHEKLNYLAKEDVKDSVDLILDYLSRSLKEQERIEIRNFCNFSIRKRKFP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
KSNKFYNIVYYRMPKSLFHYTE
CCCCEEEEEEEECCHHHHCCCC
>Mature Secondary Structure
MVTKNYLIDKVHEKLNYLAKEDVKDSVDLILDYLSRSLKEQERIEIRNFCNFSIRKRKFP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
KSNKFYNIVYYRMPKSLFHYTE
CCCCEEEEEEEECCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]