| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825629
Identifier: 157825629
GI number: 157825629
Start: 494104
End: 495021
Strand: Direct
Name: 157825629
Synonym: A1C_02730
Alternate gene names: NA
Gene position: 494104-495021 (Clockwise)
Preceding gene: 157825628
Following gene: 157825630
Centisome position: 40.14
GC content: 32.03
Gene sequence:
>918_bases ATGTTTATCTCTAGTATTTTTCAAAAATTTTTTTCTTTTCTTTGTGTTTTATTTATCACAGCTGCAATTTATGCGGATCA AAAAAAAGTAGCAATTATTGTTCCACTTGAACATGCTGCAATGACCGAGATTATATTAGGAATTAAAGAGTCGCTAAAAG ATATAGATGCAGAAATTATAGTTAAAAATGCTCATGCTGATTCTAATATTTTATTTGCTATTATAAAGCAAATAAGAGAT CAGGATATTGATGTAATAATTCCAATAGGCACGACAGCCAGCCAAACTGTGATTTCTCATATAACAAATAAACCAATTGT TTGTGCTGCTGCTATGATTAATAGTAAAAACCTACCTTTAGTTACCGGTGTTAACGACGAGATAAAAATCACCGACACCC TTATTAAATTACCTTTTTTACAGAATATCACTTTAATTTATAGCAGTAGCGAGAAAGTTATACCTGAAGTAGAAATGTTA AAATTATATGCTGGAAAAAACAATATTTCTCTGCACACGGTAATGATACAAAATTTAAATGATATGCCGGTCGCTGTAAA AAATGCTCCTGAAAATACGCAGAGTTTTATAATTCTAAAAGATCACTTAATAGTCAGCGGAATGAATATTATAAAGCAAG AAGCATTTAAACGCCGCATTCCTATCATTGCTTCCGATGAAGGGTCGGTAATTAGCGGGGCAACTATTGCGGTAGGAGTA CAAGAGAAGCAAATAGGGGTAGAAGCAGGTTTAATGGCAAAAAAAATCTTACAAGGAATAGAGCCGCAAGATATTCCATT TGTGGATATGCAAGACTTAACTTTATTTATTAACCTTAAATCATTTGTTAAACAAGATATTCTGACTAAGGAAAATTTAT CCGTACTTCCTTTGACTAAAAAAGAACTTACAGAGTAG
Upstream 100 bases:
>100_bases TACAAAATTGGCGTTGGCGTAGATAGTTTTTTGCGTTTATATTGTTTGATGCAAATTTAGATTTTGATTATTAAATTATA ACTTATGACAGGATATTAAA
Downstream 100 bases:
>100_bases TAACATGAACATTTTAGTTACTGCTCTTGAGCAATCCTTAATAATGCTGCCGCTTATTTTAGGAATGTATATAAGTTATC GTATTCTAACACTTACCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MFISSIFQKFFSFLCVLFITAAIYADQKKVAIIVPLEHAAMTEIILGIKESLKDIDAEIIVKNAHADSNILFAIIKQIRD QDIDVIIPIGTTASQTVISHITNKPIVCAAAMINSKNLPLVTGVNDEIKITDTLIKLPFLQNITLIYSSSEKVIPEVEML KLYAGKNNISLHTVMIQNLNDMPVAVKNAPENTQSFIILKDHLIVSGMNIIKQEAFKRRIPIIASDEGSVISGATIAVGV QEKQIGVEAGLMAKKILQGIEPQDIPFVDMQDLTLFINLKSFVKQDILTKENLSVLPLTKKELTE
Sequences:
>Translated_305_residues MFISSIFQKFFSFLCVLFITAAIYADQKKVAIIVPLEHAAMTEIILGIKESLKDIDAEIIVKNAHADSNILFAIIKQIRD QDIDVIIPIGTTASQTVISHITNKPIVCAAAMINSKNLPLVTGVNDEIKITDTLIKLPFLQNITLIYSSSEKVIPEVEML KLYAGKNNISLHTVMIQNLNDMPVAVKNAPENTQSFIILKDHLIVSGMNIIKQEAFKRRIPIIASDEGSVISGATIAVGV QEKQIGVEAGLMAKKILQGIEPQDIPFVDMQDLTLFINLKSFVKQDILTKENLSVLPLTKKELTE >Mature_305_residues MFISSIFQKFFSFLCVLFITAAIYADQKKVAIIVPLEHAAMTEIILGIKESLKDIDAEIIVKNAHADSNILFAIIKQIRD QDIDVIIPIGTTASQTVISHITNKPIVCAAAMINSKNLPLVTGVNDEIKITDTLIKLPFLQNITLIYSSSEKVIPEVEML KLYAGKNNISLHTVMIQNLNDMPVAVKNAPENTQSFIILKDHLIVSGMNIIKQEAFKRRIPIIASDEGSVISGATIAVGV QEKQIGVEAGLMAKKILQGIEPQDIPFVDMQDLTLFINLKSFVKQDILTKENLSVLPLTKKELTE
Specific function: Unknown
COG id: COG2984
COG function: function code R; ABC-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007487 [H]
Pfam domain/function: PF04392 ABC_sub_bind [H]
EC number: NA
Molecular weight: Translated: 33661; Mature: 33661
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFISSIFQKFFSFLCVLFITAAIYADQKKVAIIVPLEHAAMTEIILGIKESLKDIDAEII CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCEEEE VKNAHADSNILFAIIKQIRDQDIDVIIPIGTTASQTVISHITNKPIVCAAAMINSKNLPL EEECCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEECCCCCCE VTGVNDEIKITDTLIKLPFLQNITLIYSSSEKVIPEVEMLKLYAGKNNISLHTVMIQNLN EECCCCCEEEEHHEEECCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEECCC DMPVAVKNAPENTQSFIILKDHLIVSGMNIIKQEAFKRRIPIIASDEGSVISGATIAVGV CCCEEEECCCCCCCEEEEEECCEEHHHHHHHHHHHHHHCCCEEECCCCCEEECCEEEEEE QEKQIGVEAGLMAKKILQGIEPQDIPFVDMQDLTLFINLKSFVKQDILTKENLSVLPLTK CHHHCCHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEEHHHHHHHHHCCCCCCEEEECCH KELTE HHHCC >Mature Secondary Structure MFISSIFQKFFSFLCVLFITAAIYADQKKVAIIVPLEHAAMTEIILGIKESLKDIDAEII CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCEEEE VKNAHADSNILFAIIKQIRDQDIDVIIPIGTTASQTVISHITNKPIVCAAAMINSKNLPL EEECCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEECCCCCCE VTGVNDEIKITDTLIKLPFLQNITLIYSSSEKVIPEVEMLKLYAGKNNISLHTVMIQNLN EECCCCCEEEEHHEEECCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEECCC DMPVAVKNAPENTQSFIILKDHLIVSGMNIIKQEAFKRRIPIIASDEGSVISGATIAVGV CCCEEEECCCCCCCEEEEEECCEEHHHHHHHHHHHHHHCCCEEECCCCCEEECCEEEEEE QEKQIGVEAGLMAKKILQGIEPQDIPFVDMQDLTLFINLKSFVKQDILTKENLSVLPLTK CHHHCCHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEEHHHHHHHHHCCCCCCEEEECCH KELTE HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]