Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is eptB [H]
Identifier: 157825580
GI number: 157825580
Start: 449549
End: 451117
Strand: Reverse
Name: eptB [H]
Synonym: A1C_02465
Alternate gene names: 157825580
Gene position: 451117-449549 (Counterclockwise)
Preceding gene: 157825590
Following gene: 157825579
Centisome position: 36.64
GC content: 29.7
Gene sequence:
>1569_bases ATGCTCAAAACTATTCAAAAACATATAGATATCAAATTAATTAAATTATCAGCGGTTTTAGCGTTTGTTTATTGTTTGTT ATTTAATACCGCAATATTGATTTATAAATTTGATTATTATAAAGCAATAATCTTTAAAGGGATATTAGAATTATCAAAAG ATTGTTGTTATATTTATATATTTTCTTTTATAACATTTTTCGGTCTTAGCGTACATAGATTAGTACTAAAAGCCGGCGTA GGGTTTTTATTTATGACATCCGCTATTGCTAGTTATTACATTTATTTCTTCAAAATCAATCCTACTAAACAAGTAATAGG TAGTTTTTTCTCAACAGATTTAAACGAAGTCTATGAATTAACCAGCATTAAGTTAGTAATATGGATAATTTTTTGCCTTT TTACCTGTTTTTATATTCTCAAATCATTTGCAGCCGAAAATTCTAAATCATGCGTAACAAAATTATTATCTGCCGCTTGC TTACTTATTTTTGTATATAATATTATTACTCCTTCATTTAAGATACTAAAAAATTATTTTCCCATTCAGTATTTACATAA TAGCTACCTTAATTTTGCTGGAACTTTCGGTGATAAAAATTATGCATATATAGATATTAGCAAACAATATAATTTTATAG ATAACTCCGACGCTGATATTATAGGAGTTTTAGTTATAGGCGAATCGGCAAGATTTGACCATTTCGGTATTAACGGTTAT GAACGAGATACAACCCCTTACTTAAAAACCACCCCAAATCTAACTTCCTTCAAAGCTAAATCCTCTTCTAACCTTACTTA TCTTTCCGTACCGTCGTTACTTTCACGCTATCCTGCAAGTCAAATTGAAAAGACTAGACAAGAAAACAGCTTTTTATCAA TTTTAACAAATCTTGGCTTTCATACTACTTGGATTGGTACCCAAACTTTAATGAGGAGTTTTGCAAATTTTGACCTCAGT AATATATATAATGACATTAATTTTACTATAGTACCGGGCGGCTCTGCCCTCTTTTCTTTAAATGATCATGATGAAAAAAT ATTACCTTTCATAAAAGAAATAATAACAAACTCAGAGAAGCAATTTTTAGTAGTTCACACTTCCGGCAGCCATTGGAACT ATAATGCAAGATATCCAAAAGAGTTTGAGTATTTTACCCCTACATGTCCTATTAAGGTTAAGGGAGATGCAAGCGATTGC GATAAGCTTGAGTTAGTGAACAGTTATGATAATTCTATTTTATATACCGATTTTTTTTTATCTAATTTAATAGATTTGCT TAAAGATAAAAATGCATTTTTATTATATGTATCCGATCACGGCGAGTCCCTCGGAGAAAATGGTTATTACGGTCACGGCG GTCCACTACTTGCAGAACAAATAACCGTACCTCTTATAGTTTGGGTATCAGATGATTTTCAAACTAAATATCCTAAATCA GTATCTTCAATTAAAAATTATGCTAATACCGAGATTAGCCATGATTATGTATTTCATTCAATCCTTGACTGTTTAAATAT AGATTCTGACATAATAGATAAAAACTTAAGTATATGTAAATCTAGTTAA
Upstream 100 bases:
>100_bases ATGCTTGAAGGTTTTTTATTATCATGGTAGTTATTAAGTCTACTTATATTATACTCGTTGAACTTCGTATCACTACTATT TATTTCATATTACTTAATTT
Downstream 100 bases:
>100_bases AAATTATTGCATTATTAAAAAATTTATATATAAATTGAGAACTCAAGAATTATATGGTTTATTATTATGTCTGATATACC TAAACTAGACGACTATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MLKTIQKHIDIKLIKLSAVLAFVYCLLFNTAILIYKFDYYKAIIFKGILELSKDCCYIYIFSFITFFGLSVHRLVLKAGV GFLFMTSAIASYYIYFFKINPTKQVIGSFFSTDLNEVYELTSIKLVIWIIFCLFTCFYILKSFAAENSKSCVTKLLSAAC LLIFVYNIITPSFKILKNYFPIQYLHNSYLNFAGTFGDKNYAYIDISKQYNFIDNSDADIIGVLVIGESARFDHFGINGY ERDTTPYLKTTPNLTSFKAKSSSNLTYLSVPSLLSRYPASQIEKTRQENSFLSILTNLGFHTTWIGTQTLMRSFANFDLS NIYNDINFTIVPGGSALFSLNDHDEKILPFIKEIITNSEKQFLVVHTSGSHWNYNARYPKEFEYFTPTCPIKVKGDASDC DKLELVNSYDNSILYTDFFLSNLIDLLKDKNAFLLYVSDHGESLGENGYYGHGGPLLAEQITVPLIVWVSDDFQTKYPKS VSSIKNYANTEISHDYVFHSILDCLNIDSDIIDKNLSICKSS
Sequences:
>Translated_522_residues MLKTIQKHIDIKLIKLSAVLAFVYCLLFNTAILIYKFDYYKAIIFKGILELSKDCCYIYIFSFITFFGLSVHRLVLKAGV GFLFMTSAIASYYIYFFKINPTKQVIGSFFSTDLNEVYELTSIKLVIWIIFCLFTCFYILKSFAAENSKSCVTKLLSAAC LLIFVYNIITPSFKILKNYFPIQYLHNSYLNFAGTFGDKNYAYIDISKQYNFIDNSDADIIGVLVIGESARFDHFGINGY ERDTTPYLKTTPNLTSFKAKSSSNLTYLSVPSLLSRYPASQIEKTRQENSFLSILTNLGFHTTWIGTQTLMRSFANFDLS NIYNDINFTIVPGGSALFSLNDHDEKILPFIKEIITNSEKQFLVVHTSGSHWNYNARYPKEFEYFTPTCPIKVKGDASDC DKLELVNSYDNSILYTDFFLSNLIDLLKDKNAFLLYVSDHGESLGENGYYGHGGPLLAEQITVPLIVWVSDDFQTKYPKS VSSIKNYANTEISHDYVFHSILDCLNIDSDIIDKNLSICKSS >Mature_522_residues MLKTIQKHIDIKLIKLSAVLAFVYCLLFNTAILIYKFDYYKAIIFKGILELSKDCCYIYIFSFITFFGLSVHRLVLKAGV GFLFMTSAIASYYIYFFKINPTKQVIGSFFSTDLNEVYELTSIKLVIWIIFCLFTCFYILKSFAAENSKSCVTKLLSAAC LLIFVYNIITPSFKILKNYFPIQYLHNSYLNFAGTFGDKNYAYIDISKQYNFIDNSDADIIGVLVIGESARFDHFGINGY ERDTTPYLKTTPNLTSFKAKSSSNLTYLSVPSLLSRYPASQIEKTRQENSFLSILTNLGFHTTWIGTQTLMRSFANFDLS NIYNDINFTIVPGGSALFSLNDHDEKILPFIKEIITNSEKQFLVVHTSGSHWNYNARYPKEFEYFTPTCPIKVKGDASDC DKLELVNSYDNSILYTDFFLSNLIDLLKDKNAFLLYVSDHGESLGENGYYGHGGPLLAEQITVPLIVWVSDDFQTKYPKS VSSIKNYANTEISHDYVFHSILDCLNIDSDIIDKNLSICKSS
Specific function: Catalyzes the addition of a phosphoethanolamine (pEtN) moiety to the outer 3-deoxy-D-manno-octulosonic acid (KDO) residue of a KDO(2)-lipid A. Phosphatidylethanolamines with one unsaturated acyl group functions as pEtN donors and the reaction releases dia
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. EptB subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082286, Length=542, Percent_Identity=27.3062730627306, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI87082372, Length=325, Percent_Identity=30.4615384615385, Blast_Score=144, Evalue=2e-35, Organism=Escherichia coli, GI87082223, Length=362, Percent_Identity=27.9005524861878, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI1790392, Length=307, Percent_Identity=28.0130293159609, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1787035, Length=275, Percent_Identity=25.8181818181818, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012549 - InterPro: IPR000917 [H]
Pfam domain/function: PF08019 DUF1705; PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 59530; Mature: 59530
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTIQKHIDIKLIKLSAVLAFVYCLLFNTAILIYKFDYYKAIIFKGILELSKDCCYIYI CCCHHHHHCCEEEEHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCHHHHHH FSFITFFGLSVHRLVLKAGVGFLFMTSAIASYYIYFFKINPTKQVIGSFFSTDLNEVYEL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHCCHHHHHHH TSIKLVIWIIFCLFTCFYILKSFAAENSKSCVTKLLSAACLLIFVYNIITPSFKILKNYF HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC PIQYLHNSYLNFAGTFGDKNYAYIDISKQYNFIDNSDADIIGVLVIGESARFDHFGINGY CHHHHHHHHHCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC ERDTTPYLKTTPNLTSFKAKSSSNLTYLSVPSLLSRYPASQIEKTRQENSFLSILTNLGF CCCCCCCEEECCCCCEEECCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC HTTWIGTQTLMRSFANFDLSNIYNDINFTIVPGGSALFSLNDHDEKILPFIKEIITNSEK CEEEHHHHHHHHHHHCCCHHHHHCCCEEEEEECCCEEEECCCCCHHHHHHHHHHHCCCCC QFLVVHTSGSHWNYNARYPKEFEYFTPTCPIKVKGDASDCDKLELVNSYDNSILYTDFFL EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHCCCCCEEEHHHHH SNLIDLLKDKNAFLLYVSDHGESLGENGYYGHGGPLLAEQITVPLIVWVSDDFQTKYPKS HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCEEEEEEECCCCCCCCCHH VSSIKNYANTEISHDYVFHSILDCLNIDSDIIDKNLSICKSS HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCHHHHCCC >Mature Secondary Structure MLKTIQKHIDIKLIKLSAVLAFVYCLLFNTAILIYKFDYYKAIIFKGILELSKDCCYIYI CCCHHHHHCCEEEEHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCHHHHHH FSFITFFGLSVHRLVLKAGVGFLFMTSAIASYYIYFFKINPTKQVIGSFFSTDLNEVYEL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHCCHHHHHHH TSIKLVIWIIFCLFTCFYILKSFAAENSKSCVTKLLSAACLLIFVYNIITPSFKILKNYF HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC PIQYLHNSYLNFAGTFGDKNYAYIDISKQYNFIDNSDADIIGVLVIGESARFDHFGINGY CHHHHHHHHHCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC ERDTTPYLKTTPNLTSFKAKSSSNLTYLSVPSLLSRYPASQIEKTRQENSFLSILTNLGF CCCCCCCEEECCCCCEEECCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC HTTWIGTQTLMRSFANFDLSNIYNDINFTIVPGGSALFSLNDHDEKILPFIKEIITNSEK CEEEHHHHHHHHHHHCCCHHHHHCCCEEEEEECCCEEEECCCCCHHHHHHHHHHHCCCCC QFLVVHTSGSHWNYNARYPKEFEYFTPTCPIKVKGDASDCDKLELVNSYDNSILYTDFFL EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHCCCCCEEEHHHHH SNLIDLLKDKNAFLLYVSDHGESLGENGYYGHGGPLLAEQITVPLIVWVSDDFQTKYPKS HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCEEEEEEECCCCCCCCCHH VSSIKNYANTEISHDYVFHSILDCLNIDSDIIDKNLSICKSS HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 7721701 [H]