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The map label for this gene is ybiT [H]

Identifier: 157825549

GI number: 157825549

Start: 421440

End: 421802

Strand: Direct

Name: ybiT [H]

Synonym: A1C_02300

Alternate gene names: 157825549

Gene position: 421440-421802 (Clockwise)

Preceding gene: 157825548

Following gene: 157825550

Centisome position: 34.23

GC content: 30.03

Gene sequence:

>363_bases
ATGATTATTATAAACGATTTAGCCATGAGTTATGGTACAAGAAGACTATTTACTGATGTAAATTTGTATATTAAAAATAA
TAAACGATATGGTTTAGTAGGTGCTAACGGAGCAGGTAAAACAACTTTTTTCAAAGTTTTAACTAAGGAAGGAGAGCCAG
CTTTCGGTGATATTAATATACCTAAAAACTCTAAAGTAGGTTGTTTAAAACAAGATCAATTTCTTTATGAAAATACTAAA
ATTATAGATACGGTAATAGCAGTAAATAATGAGTTATGGAAAGCTTTACAGGAAAAAGAAGCGATATTAAAGCGGCAAGA
ATGTAGTGATGAAGATTGGTATAAGCCTGGTGAACTTGAATAG

Upstream 100 bases:

>100_bases
TTTTGCAAAAGCTTTTGAGTTATTGAAGAAGTATTAAATATTTATAACTTTTCTAAAACCTTTTCAATTATTCCTGAATT
TAACCACGACATCTAAAAAT

Downstream 100 bases:

>100_bases
GTAATATACGATAATGATGGTTATACTGCTGAAATTGTTGCGGCTAACTTGCTTGTAGGTCTTGGTATAGCCGCAAAATA
TCATTATGAACCGCTTTCTG

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MIIINDLAMSYGTRRLFTDVNLYIKNNKRYGLVGANGAGKTTFFKVLTKEGEPAFGDINIPKNSKVGCLKQDQFLYENTK
IIDTVIAVNNELWKALQEKEAILKRQECSDEDWYKPGELE

Sequences:

>Translated_120_residues
MIIINDLAMSYGTRRLFTDVNLYIKNNKRYGLVGANGAGKTTFFKVLTKEGEPAFGDINIPKNSKVGCLKQDQFLYENTK
IIDTVIAVNNELWKALQEKEAILKRQECSDEDWYKPGELE
>Mature_120_residues
MIIINDLAMSYGTRRLFTDVNLYIKNNKRYGLVGANGAGKTTFFKVLTKEGEPAFGDINIPKNSKVGCLKQDQFLYENTK
IIDTVIAVNNELWKALQEKEAILKRQECSDEDWYKPGELE

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Escherichia coli, GI1787041, Length=120, Percent_Identity=40, Blast_Score=108, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 13695; Mature: 13695

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIINDLAMSYGTRRLFTDVNLYIKNNKRYGLVGANGAGKTTFFKVLTKEGEPAFGDINI
CEEECCCHHHCCCEEEEEEEEEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCC
PKNSKVGCLKQDQFLYENTKIIDTVIAVNNELWKALQEKEAILKRQECSDEDWYKPGELE
CCCCCCCCEECCCEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIIINDLAMSYGTRRLFTDVNLYIKNNKRYGLVGANGAGKTTFFKVLTKEGEPAFGDINI
CEEECCCHHHCCCEEEEEEEEEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCC
PKNSKVGCLKQDQFLYENTKIIDTVIAVNNELWKALQEKEAILKRQECSDEDWYKPGELE
CCCCCCCCEECCCEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]