Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is 157825545
Identifier: 157825545
GI number: 157825545
Start: 416183
End: 417160
Strand: Reverse
Name: 157825545
Synonym: A1C_02280
Alternate gene names: NA
Gene position: 417160-416183 (Counterclockwise)
Preceding gene: 157825554
Following gene: 157825543
Centisome position: 33.89
GC content: 30.06
Gene sequence:
>978_bases ATGTTATTTAAAATACTATATAAAACGATTATTACATTAGCTCTAATTTATTTTCTACTTATTATCTTAGAATATGCACA TCAAGGTTTTATTAATGATTTATCATTACAAAAAGTAGATTTATCTATTCATAATTCTATAAAAGAACCTATCTATTTAG TTTCCTATGCCGATGGTCCGGAGTATATTTATCGTAATCAAAATGTAACCACTCATTATGCAATTAATAAAGGTATAGAT TTCATATTGAACTATAAGAAAAAGCATATACCTCAAGTGTTTATAGAGAAAAATCAAAAAATTTTTAATGAGCTTGCAGG AGCTGGTTTATGGATATGGAAACCTTATATTATACTTAAAACAATGCAAAAAGCACCAGAAGGAGCTATTATAGTATATT TAGATTCGGCTTTTGTTATTAAAAAGCATATCAGTAGTTTAACAAATCTTTTAGGCGATAATGATATATTACTAGTACAT GATCGCGATCGTAAAAACGGTAGTTTTATTAAAGGTGAAACCTTTGCCTTAATGGATTGTCTAACCGAAGAATGCAGAAA TGACGATCATATTTGGAGTGCCGTTATTGTTGTGCGTAATACCAAGCTTTCTCGTTCTTTTATTGAAAAATGGCTAAAAA ATTGTGAAGATATTAGAATTCTTTCAGGCAAAGATTATAATATTCATCCTAATTATGATGAATATAAATGGCATCATTCC GACCAATCGGTACTTAGCCTTATATATCACAAAAATCCACAATCGGTTAAAGTAATAGAATATGCGGAAACAGCACCTTT ATTATCTTGGTTTCACCGTAAATATTCAAATAGCTCACCATTAAAGCCATGGTATAGCATATACGGTATAGATCCTATAA TTCATTTTAATACTAACGGTAAAGTTTTACCTTCCACTGCTCTTATAAACACTCCGCCGATTGTGAGGCTACGTAAGTGG GTTATAGAACATCAATGA
Upstream 100 bases:
>100_bases ATATTATTCCAGCTTACGCGGGAATGATATCGCACAGTTTTTTCGCTCATATAGGCAATACCTCCTTACAATGACATAGA CTAAAGAACTCAAAAATCAT
Downstream 100 bases:
>100_bases TGGGCTTTGTCTGCATGGCTCTTGCAAAAGGCTCCGTTGTCATACTGTGGTCAAGCGAACTAGGTAACAGCTATACTTTA AGTAAATGAAGAGTTGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MLFKILYKTIITLALIYFLLIILEYAHQGFINDLSLQKVDLSIHNSIKEPIYLVSYADGPEYIYRNQNVTTHYAINKGID FILNYKKKHIPQVFIEKNQKIFNELAGAGLWIWKPYIILKTMQKAPEGAIIVYLDSAFVIKKHISSLTNLLGDNDILLVH DRDRKNGSFIKGETFALMDCLTEECRNDDHIWSAVIVVRNTKLSRSFIEKWLKNCEDIRILSGKDYNIHPNYDEYKWHHS DQSVLSLIYHKNPQSVKVIEYAETAPLLSWFHRKYSNSSPLKPWYSIYGIDPIIHFNTNGKVLPSTALINTPPIVRLRKW VIEHQ
Sequences:
>Translated_325_residues MLFKILYKTIITLALIYFLLIILEYAHQGFINDLSLQKVDLSIHNSIKEPIYLVSYADGPEYIYRNQNVTTHYAINKGID FILNYKKKHIPQVFIEKNQKIFNELAGAGLWIWKPYIILKTMQKAPEGAIIVYLDSAFVIKKHISSLTNLLGDNDILLVH DRDRKNGSFIKGETFALMDCLTEECRNDDHIWSAVIVVRNTKLSRSFIEKWLKNCEDIRILSGKDYNIHPNYDEYKWHHS DQSVLSLIYHKNPQSVKVIEYAETAPLLSWFHRKYSNSSPLKPWYSIYGIDPIIHFNTNGKVLPSTALINTPPIVRLRKW VIEHQ >Mature_325_residues MLFKILYKTIITLALIYFLLIILEYAHQGFINDLSLQKVDLSIHNSIKEPIYLVSYADGPEYIYRNQNVTTHYAINKGID FILNYKKKHIPQVFIEKNQKIFNELAGAGLWIWKPYIILKTMQKAPEGAIIVYLDSAFVIKKHISSLTNLLGDNDILLVH DRDRKNGSFIKGETFALMDCLTEECRNDDHIWSAVIVVRNTKLSRSFIEKWLKNCEDIRILSGKDYNIHPNYDEYKWHHS DQSVLSLIYHKNPQSVKVIEYAETAPLLSWFHRKYSNSSPLKPWYSIYGIDPIIHFNTNGKVLPSTALINTPPIVRLRKW VIEHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37933; Mature: 37933
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFKILYKTIITLALIYFLLIILEYAHQGFINDLSLQKVDLSIHNSIKEPIYLVSYADGP CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCCCCEEEEEECCCC EYIYRNQNVTTHYAINKGIDFILNYKKKHIPQVFIEKNQKIFNELAGAGLWIWKPYIILK CEEEECCCCEEEEEECCCCHHEECCCHHHCCHHHHHCCHHHHHHHHCCCEEEHHHHHHHH TMQKAPEGAIIVYLDSAFVIKKHISSLTNLLGDNDILLVHDRDRKNGSFIKGETFALMDC HHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCHHHHHHH LTEECRNDDHIWSAVIVVRNTKLSRSFIEKWLKNCEDIRILSGKDYNIHPNYDEYKWHHS HHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEECC DQSVLSLIYHKNPQSVKVIEYAETAPLLSWFHRKYSNSSPLKPWYSIYGIDPIIHFNTNG CHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCC KVLPSTALINTPPIVRLRKWVIEHQ CCCCCCEEECCCCHHHHHHHHHCCC >Mature Secondary Structure MLFKILYKTIITLALIYFLLIILEYAHQGFINDLSLQKVDLSIHNSIKEPIYLVSYADGP CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCCCCEEEEEECCCC EYIYRNQNVTTHYAINKGIDFILNYKKKHIPQVFIEKNQKIFNELAGAGLWIWKPYIILK CEEEECCCCEEEEEECCCCHHEECCCHHHCCHHHHHCCHHHHHHHHCCCEEEHHHHHHHH TMQKAPEGAIIVYLDSAFVIKKHISSLTNLLGDNDILLVHDRDRKNGSFIKGETFALMDC HHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCHHHHHHH LTEECRNDDHIWSAVIVVRNTKLSRSFIEKWLKNCEDIRILSGKDYNIHPNYDEYKWHHS HHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEECC DQSVLSLIYHKNPQSVKVIEYAETAPLLSWFHRKYSNSSPLKPWYSIYGIDPIIHFNTNG CHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCC KVLPSTALINTPPIVRLRKWVIEHQ CCCCCCEEECCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA