Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

Click here to switch to the map view.

The map label for this gene is 157825545

Identifier: 157825545

GI number: 157825545

Start: 416183

End: 417160

Strand: Reverse

Name: 157825545

Synonym: A1C_02280

Alternate gene names: NA

Gene position: 417160-416183 (Counterclockwise)

Preceding gene: 157825554

Following gene: 157825543

Centisome position: 33.89

GC content: 30.06

Gene sequence:

>978_bases
ATGTTATTTAAAATACTATATAAAACGATTATTACATTAGCTCTAATTTATTTTCTACTTATTATCTTAGAATATGCACA
TCAAGGTTTTATTAATGATTTATCATTACAAAAAGTAGATTTATCTATTCATAATTCTATAAAAGAACCTATCTATTTAG
TTTCCTATGCCGATGGTCCGGAGTATATTTATCGTAATCAAAATGTAACCACTCATTATGCAATTAATAAAGGTATAGAT
TTCATATTGAACTATAAGAAAAAGCATATACCTCAAGTGTTTATAGAGAAAAATCAAAAAATTTTTAATGAGCTTGCAGG
AGCTGGTTTATGGATATGGAAACCTTATATTATACTTAAAACAATGCAAAAAGCACCAGAAGGAGCTATTATAGTATATT
TAGATTCGGCTTTTGTTATTAAAAAGCATATCAGTAGTTTAACAAATCTTTTAGGCGATAATGATATATTACTAGTACAT
GATCGCGATCGTAAAAACGGTAGTTTTATTAAAGGTGAAACCTTTGCCTTAATGGATTGTCTAACCGAAGAATGCAGAAA
TGACGATCATATTTGGAGTGCCGTTATTGTTGTGCGTAATACCAAGCTTTCTCGTTCTTTTATTGAAAAATGGCTAAAAA
ATTGTGAAGATATTAGAATTCTTTCAGGCAAAGATTATAATATTCATCCTAATTATGATGAATATAAATGGCATCATTCC
GACCAATCGGTACTTAGCCTTATATATCACAAAAATCCACAATCGGTTAAAGTAATAGAATATGCGGAAACAGCACCTTT
ATTATCTTGGTTTCACCGTAAATATTCAAATAGCTCACCATTAAAGCCATGGTATAGCATATACGGTATAGATCCTATAA
TTCATTTTAATACTAACGGTAAAGTTTTACCTTCCACTGCTCTTATAAACACTCCGCCGATTGTGAGGCTACGTAAGTGG
GTTATAGAACATCAATGA

Upstream 100 bases:

>100_bases
ATATTATTCCAGCTTACGCGGGAATGATATCGCACAGTTTTTTCGCTCATATAGGCAATACCTCCTTACAATGACATAGA
CTAAAGAACTCAAAAATCAT

Downstream 100 bases:

>100_bases
TGGGCTTTGTCTGCATGGCTCTTGCAAAAGGCTCCGTTGTCATACTGTGGTCAAGCGAACTAGGTAACAGCTATACTTTA
AGTAAATGAAGAGTTGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MLFKILYKTIITLALIYFLLIILEYAHQGFINDLSLQKVDLSIHNSIKEPIYLVSYADGPEYIYRNQNVTTHYAINKGID
FILNYKKKHIPQVFIEKNQKIFNELAGAGLWIWKPYIILKTMQKAPEGAIIVYLDSAFVIKKHISSLTNLLGDNDILLVH
DRDRKNGSFIKGETFALMDCLTEECRNDDHIWSAVIVVRNTKLSRSFIEKWLKNCEDIRILSGKDYNIHPNYDEYKWHHS
DQSVLSLIYHKNPQSVKVIEYAETAPLLSWFHRKYSNSSPLKPWYSIYGIDPIIHFNTNGKVLPSTALINTPPIVRLRKW
VIEHQ

Sequences:

>Translated_325_residues
MLFKILYKTIITLALIYFLLIILEYAHQGFINDLSLQKVDLSIHNSIKEPIYLVSYADGPEYIYRNQNVTTHYAINKGID
FILNYKKKHIPQVFIEKNQKIFNELAGAGLWIWKPYIILKTMQKAPEGAIIVYLDSAFVIKKHISSLTNLLGDNDILLVH
DRDRKNGSFIKGETFALMDCLTEECRNDDHIWSAVIVVRNTKLSRSFIEKWLKNCEDIRILSGKDYNIHPNYDEYKWHHS
DQSVLSLIYHKNPQSVKVIEYAETAPLLSWFHRKYSNSSPLKPWYSIYGIDPIIHFNTNGKVLPSTALINTPPIVRLRKW
VIEHQ
>Mature_325_residues
MLFKILYKTIITLALIYFLLIILEYAHQGFINDLSLQKVDLSIHNSIKEPIYLVSYADGPEYIYRNQNVTTHYAINKGID
FILNYKKKHIPQVFIEKNQKIFNELAGAGLWIWKPYIILKTMQKAPEGAIIVYLDSAFVIKKHISSLTNLLGDNDILLVH
DRDRKNGSFIKGETFALMDCLTEECRNDDHIWSAVIVVRNTKLSRSFIEKWLKNCEDIRILSGKDYNIHPNYDEYKWHHS
DQSVLSLIYHKNPQSVKVIEYAETAPLLSWFHRKYSNSSPLKPWYSIYGIDPIIHFNTNGKVLPSTALINTPPIVRLRKW
VIEHQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37933; Mature: 37933

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFKILYKTIITLALIYFLLIILEYAHQGFINDLSLQKVDLSIHNSIKEPIYLVSYADGP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCCCCEEEEEECCCC
EYIYRNQNVTTHYAINKGIDFILNYKKKHIPQVFIEKNQKIFNELAGAGLWIWKPYIILK
CEEEECCCCEEEEEECCCCHHEECCCHHHCCHHHHHCCHHHHHHHHCCCEEEHHHHHHHH
TMQKAPEGAIIVYLDSAFVIKKHISSLTNLLGDNDILLVHDRDRKNGSFIKGETFALMDC
HHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCHHHHHHH
LTEECRNDDHIWSAVIVVRNTKLSRSFIEKWLKNCEDIRILSGKDYNIHPNYDEYKWHHS
HHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEECC
DQSVLSLIYHKNPQSVKVIEYAETAPLLSWFHRKYSNSSPLKPWYSIYGIDPIIHFNTNG
CHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCC
KVLPSTALINTPPIVRLRKWVIEHQ
CCCCCCEEECCCCHHHHHHHHHCCC
>Mature Secondary Structure
MLFKILYKTIITLALIYFLLIILEYAHQGFINDLSLQKVDLSIHNSIKEPIYLVSYADGP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCCCCEEEEEECCCC
EYIYRNQNVTTHYAINKGIDFILNYKKKHIPQVFIEKNQKIFNELAGAGLWIWKPYIILK
CEEEECCCCEEEEEECCCCHHEECCCHHHCCHHHHHCCHHHHHHHHCCCEEEHHHHHHHH
TMQKAPEGAIIVYLDSAFVIKKHISSLTNLLGDNDILLVHDRDRKNGSFIKGETFALMDC
HHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCHHHHHHH
LTEECRNDDHIWSAVIVVRNTKLSRSFIEKWLKNCEDIRILSGKDYNIHPNYDEYKWHHS
HHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEECC
DQSVLSLIYHKNPQSVKVIEYAETAPLLSWFHRKYSNSSPLKPWYSIYGIDPIIHFNTNG
CHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCC
KVLPSTALINTPPIVRLRKWVIEHQ
CCCCCCEEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA