Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

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The map label for this gene is ygeR [C]

Identifier: 157825538

GI number: 157825538

Start: 410030

End: 410707

Strand: Direct

Name: ygeR [C]

Synonym: A1C_02235

Alternate gene names: 157825538

Gene position: 410030-410707 (Clockwise)

Preceding gene: 157825536

Following gene: 157825539

Centisome position: 33.31

GC content: 31.42

Gene sequence:

>678_bases
ATGTCAGATTTGTTTTCTAATGTAAATAATAGTTTTGTTCAATATATGAAATATCCTGTTGTACTTAGTATCGTTATATG
TTTTTGTTTAGTTGCTTGTGTTGAACAGCCGCCTGCTCCAATTGAGTATAAAGTAGGAGATGTAACTGCAAATAATAATT
CTACCGCATTAGAACACGATGAGGGGTTGATAGTTCAAAGAACTATGGAAGACGATACCGTATCAGAAAAAGTTAGCGGT
ATACTCGAAGAACCAAAGGCGAAAATTATAGAATGTTATAATGATGATATTGAGATTCCTATATCTCGGAATGAATATGA
AGAAGAGATAGAGCAGTCAAACTTTGTAAAACCGTTAAACGGTGTAATGCTTACCGAGTTTAAAGACGGTAAAAGTAAAG
GGATAGATATTGCAGTTAAAGAATATAGCGACGTTAAATCGATAGCCGCAGGAACGGTAATATATTCAGGTTTTAATAAA
CAATTTGGTAATTTAGTAATAGTTAAGTTAGATAAAGACGATTTAGAAGTAGCATATGCGAGTTTAGATGATTTGTTACT
TAAAAAAGGTGATAAAATTACTAAAAATAGTGTTATCGGACATGTAAAACATAAGTTATATTTTGCAATGCGTAGAAATA
GAATAGCGGTTGATCCGAGTAAATATATAGAATTTTAA

Upstream 100 bases:

>100_bases
CAGACTTAAGCTCATAACCTGAGTGATCACTAGCTATGACAATATTATAAGTTTGCATAGTTAATTTTTTGATGGAAAAT
AATAACAAAAATTATATACT

Downstream 100 bases:

>100_bases
ATGGAAGATATTATTATTCTTACTAAATACTGTGAACCTCAAAATGTTATAGTAAGAAGGAGTGGTAAGGCTAAAAATAT
AGCCATACGAATTACGCCTA

Product: membrane proteins related to metalloendopeptidase

Products: NA

Alternate protein names: Membrane-Bound Metallopeptidase

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSDLFSNVNNSFVQYMKYPVVLSIVICFCLVACVEQPPAPIEYKVGDVTANNNSTALEHDEGLIVQRTMEDDTVSEKVSG
ILEEPKAKIIECYNDDIEIPISRNEYEEEIEQSNFVKPLNGVMLTEFKDGKSKGIDIAVKEYSDVKSIAAGTVIYSGFNK
QFGNLVIVKLDKDDLEVAYASLDDLLLKKGDKITKNSVIGHVKHKLYFAMRRNRIAVDPSKYIEF

Sequences:

>Translated_225_residues
MSDLFSNVNNSFVQYMKYPVVLSIVICFCLVACVEQPPAPIEYKVGDVTANNNSTALEHDEGLIVQRTMEDDTVSEKVSG
ILEEPKAKIIECYNDDIEIPISRNEYEEEIEQSNFVKPLNGVMLTEFKDGKSKGIDIAVKEYSDVKSIAAGTVIYSGFNK
QFGNLVIVKLDKDDLEVAYASLDDLLLKKGDKITKNSVIGHVKHKLYFAMRRNRIAVDPSKYIEF
>Mature_224_residues
SDLFSNVNNSFVQYMKYPVVLSIVICFCLVACVEQPPAPIEYKVGDVTANNNSTALEHDEGLIVQRTMEDDTVSEKVSGI
LEEPKAKIIECYNDDIEIPISRNEYEEEIEQSNFVKPLNGVMLTEFKDGKSKGIDIAVKEYSDVKSIAAGTVIYSGFNKQ
FGNLVIVKLDKDDLEVAYASLDDLLLKKGDKITKNSVIGHVKHKLYFAMRRNRIAVDPSKYIEF

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Attached to the membrane by a lipid anchor (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25287; Mature: 25156

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLFSNVNNSFVQYMKYPVVLSIVICFCLVACVEQPPAPIEYKVGDVTANNNSTALEHD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECEEEECCCCCEEECC
EGLIVQRTMEDDTVSEKVSGILEEPKAKIIECYNDDIEIPISRNEYEEEIEQSNFVKPLN
CCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCC
GVMLTEFKDGKSKGIDIAVKEYSDVKSIAAGTVIYSGFNKQFGNLVIVKLDKDDLEVAYA
CEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCHHHHHH
SLDDLLLKKGDKITKNSVIGHVKHKLYFAMRRNRIAVDPSKYIEF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHCCC
>Mature Secondary Structure 
SDLFSNVNNSFVQYMKYPVVLSIVICFCLVACVEQPPAPIEYKVGDVTANNNSTALEHD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECEEEECCCCCEEECC
EGLIVQRTMEDDTVSEKVSGILEEPKAKIIECYNDDIEIPISRNEYEEEIEQSNFVKPLN
CCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCC
GVMLTEFKDGKSKGIDIAVKEYSDVKSIAAGTVIYSGFNKQFGNLVIVKLDKDDLEVAYA
CEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCHHHHHH
SLDDLLLKKGDKITKNSVIGHVKHKLYFAMRRNRIAVDPSKYIEF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA