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The map label for this gene is yihI

Identifier: 157373116

GI number: 157373116

Start: 5414585

End: 5415136

Strand: Reverse

Name: yihI

Synonym: Spro_4885

Alternate gene names: 157373116

Gene position: 5415136-5414585 (Counterclockwise)

Preceding gene: 157373118

Following gene: 157373115

Centisome position: 99.38

GC content: 53.44

Gene sequence:

>552_bases
ATGAACCAGCCATCAAAAGCACCTCGCGCCCCACGCAGCAGCGCGGCGACGCCGAAAAACAAAAAGAAAAGCCGTGCGGA
GCTCGATCAGGAAGCCCGTGAACACAAGCGTGCGAAAAAACGCCGTGGTCTCGCTTCCGGTTCTCGCACCCAGGTTGAGT
CCACCAATCAAAAAAATAAAGCGGCGGCCCAGGCCAAAGATCCGCGTATCGGCAGCAAAGTGCCGGTAGCGCTGGTGGTT
GAAGATAAGCCAAAAGCCAAACCGCAACCCAAGCCGAAAGCTGAAGCCAAGCCTAAGCCACGTCTGACGCCGGAAGAAGA
ACTGGCCAAGCTGGAAAATGATGAGCGTCTGGACGCACTGCTGGATCGCATTGATGACGGCGAGACTCTGAGCGCCGAAG
ATCAGAAATATGTTGATCAGACGCTGGATCGTATCGATGCCCTGATGGAGCAATTGGGTATTGAATTGGGTGATGACGAC
GAAGAAGAAGAAGAGAAGCGGGAAGATATCCTGAAGCTGCTGAAAGGCGGTAACCCAAAAGACGTAATTTAA

Upstream 100 bases:

>100_bases
AACCTGCCGCCTTTTTTCTTTGTCCGCTTTCTGCTAGATTCCGCCGCAATCGTATAGCATCTATCTCTATACTGAATCTA
CATACCTAAGAGCATACGCT

Downstream 100 bases:

>100_bases
CGCGTCATGTGGCTGATCCTGACAATAGCCCTACTCTTGATGTGTTATCTGCTGTGGTTATTCGGTAAACTATGGCGGCT
GTCTAAACGCAAAACGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MNQPSKAPRAPRSSAATPKNKKKSRAELDQEAREHKRAKKRRGLASGSRTQVESTNQKNKAAAQAKDPRIGSKVPVALVV
EDKPKAKPQPKPKAEAKPKPRLTPEEELAKLENDERLDALLDRIDDGETLSAEDQKYVDQTLDRIDALMEQLGIELGDDD
EEEEEKREDILKLLKGGNPKDVI

Sequences:

>Translated_183_residues
MNQPSKAPRAPRSSAATPKNKKKSRAELDQEAREHKRAKKRRGLASGSRTQVESTNQKNKAAAQAKDPRIGSKVPVALVV
EDKPKAKPQPKPKAEAKPKPRLTPEEELAKLENDERLDALLDRIDDGETLSAEDQKYVDQTLDRIDALMEQLGIELGDDD
EEEEEKREDILKLLKGGNPKDVI
>Mature_183_residues
MNQPSKAPRAPRSSAATPKNKKKSRAELDQEAREHKRAKKRRGLASGSRTQVESTNQKNKAAAQAKDPRIGSKVPVALVV
EDKPKAKPQPKPKAEAKPKPRLTPEEELAKLENDERLDALLDRIDDGETLSAEDQKYVDQTLDRIDALMEQLGIELGDDD
EEEEEKREDILKLLKGGNPKDVI

Specific function: A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis

COG id: COG3078

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YihI family

Homologues:

Organism=Escherichia coli, GI1790297, Length=141, Percent_Identity=54.6099290780142, Blast_Score=117, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIHI_SERP5 (A8GLI7)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001481105.1
- STRING:   A8GLI7
- GeneID:   5602551
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_4885
- eggNOG:   COG3078
- HOGENOM:   HBG303443
- OMA:   IDILMEQ
- ProtClustDB:   PRK05244
- BioCyc:   SPRO399741:SPRO_4885-MONOMER
- HAMAP:   MF_01058
- InterPro:   IPR007336

Pfam domain/function: PF04220 DUF414

EC number: NA

Molecular weight: Translated: 20402; Mature: 20402

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPSKAPRAPRSSAATPKNKKKSRAELDQEAREHKRAKKRRGLASGSRTQVESTNQKNK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHH
AAAQAKDPRIGSKVPVALVVEDKPKAKPQPKPKAEAKPKPRLTPEEELAKLENDERLDAL
HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHH
LDRIDDGETLSAEDQKYVDQTLDRIDALMEQLGIELGDDDEEEEEKREDILKLLKGGNPK
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC
DVI
CCC
>Mature Secondary Structure
MNQPSKAPRAPRSSAATPKNKKKSRAELDQEAREHKRAKKRRGLASGSRTQVESTNQKNK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHH
AAAQAKDPRIGSKVPVALVVEDKPKAKPQPKPKAEAKPKPRLTPEEELAKLENDERLDAL
HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHH
LDRIDDGETLSAEDQKYVDQTLDRIDALMEQLGIELGDDDEEEEEKREDILKLLKGGNPK
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC
DVI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA