| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is argE [H]
Identifier: 157373014
GI number: 157373014
Start: 5297484
End: 5298629
Strand: Direct
Name: argE [H]
Synonym: Spro_4782
Alternate gene names: 157373014
Gene position: 5297484-5298629 (Clockwise)
Preceding gene: 157373009
Following gene: 157373015
Centisome position: 97.22
GC content: 59.51
Gene sequence:
>1146_bases ATGAAATTACCTCCATTTATTGAGCTGTACCGGGCGTTGATCGCCACTCCGTCGATCAGCGCCACCGATGGCGCCCTCGA TCAGAGTAATGAAGCGTTAATCAACTTGCTGGCCGGCTGGTTTGCCGATTTGGGCTTTCGCGTCGACGTGCAGCCGGTGC CGGACAGCCGCAACAAATTCAACCTGCTGGCCAGCATTGGCGAAGGCAGCGGTGGCCTGCTGCTGGCGGGTCACACCGAC ACCGTGCCTTATGATGAAGGCCGCTGGACGCGCGACCCTTTCACCCTGACCGAACACGACAATAAGCTGTACGGTCTGGG CACCGCCGATATGAAAGGCTTCTTTGCCTTTATTCTGGATGCGGTACGCGACATCGACGCCAGCCAACTGACCAATCCTT TATACATTCTGGCCACCGCAGATGAAGAAACGACGATGGCCGGCGCACGTTATTTTGCCGCCTCGACCAGCATCCGTCCG GACTTCGCCATTATCGGTGAGCCAACCTCGCTGCAGCCGGTACGCGCGCACAAGGGCCACATAGCCAACGCCATCCGCAT CGTCGGCCAATCCGGCCACTCGAGTGACCCGGCGCGCGGCGTGAACGCCATCGATTTGATGCATGAAACCATCGGCCGCC TGATGGAACTGCGCAAAACGTTGCAAGAGCGCTTTAACAACCCGGCCTTTGCCGTGCCCTACCCGACCATGAACTTCGGT CATATCAACGGGGGCGATGCGGCCAACCGTATCTGCGCCTGCTGCGAGCTGCATCTGGATATCCGCCCGTTACCGGGCAT GACGCTCGACAACATCAACGAACTGATGCAGCAAACGCTGGAGCCAGTCAGCCAGCGCTGGCCGGGCCGCCTGAGTATTG AGGAGCTGCACGCCTCGGTACCGGGCTATGAGTGCCCGACCGATCACCATATGGTGGCGGTGATTGAGAAACTGCTGGGC ACCCGCACGCAGGTGGTCAACTATTGCACTGAGGCTCCCTTCGTCCAGCAGGTCTGCCCGACGCTGGTGTTGGGCCCTGG CTCTATCGACCAGGCGCATCAACCGGACGAATACATAGATACCGGCTTTATCGAACCGACGCGCAAGCTGCTGGGTCAGT TGGTCAGCCACTTCTGCCGCCAATAA
Upstream 100 bases:
>100_bases CGGGAATCGGGTTCCCTTACGCTCCAGCTTATTGTATTTTTATTCACAATAAATGCATGAATATTGATACCAACCTAACC AAAGGCTGTCAACAGTGAAG
Downstream 100 bases:
>100_bases ACCTGACACAGGGTAGGGTTAATGATTTATCATCTCCCTACCCATTAATAAGTAGCAAACCAAGGAAATAAGCCAGACTG ATAACCGGCGCAGCGTAATT
Product: acetylornithine deacetylase
Products: NA
Alternate protein names: AO; Acetylornithinase; N-acetylornithinase; NAO [H]
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKLPPFIELYRALIATPSISATDGALDQSNEALINLLAGWFADLGFRVDVQPVPDSRNKFNLLASIGEGSGGLLLAGHTD TVPYDEGRWTRDPFTLTEHDNKLYGLGTADMKGFFAFILDAVRDIDASQLTNPLYILATADEETTMAGARYFAASTSIRP DFAIIGEPTSLQPVRAHKGHIANAIRIVGQSGHSSDPARGVNAIDLMHETIGRLMELRKTLQERFNNPAFAVPYPTMNFG HINGGDAANRICACCELHLDIRPLPGMTLDNINELMQQTLEPVSQRWPGRLSIEELHASVPGYECPTDHHMVAVIEKLLG TRTQVVNYCTEAPFVQQVCPTLVLGPGSIDQAHQPDEYIDTGFIEPTRKLLGQLVSHFCRQ
Sequences:
>Translated_381_residues MKLPPFIELYRALIATPSISATDGALDQSNEALINLLAGWFADLGFRVDVQPVPDSRNKFNLLASIGEGSGGLLLAGHTD TVPYDEGRWTRDPFTLTEHDNKLYGLGTADMKGFFAFILDAVRDIDASQLTNPLYILATADEETTMAGARYFAASTSIRP DFAIIGEPTSLQPVRAHKGHIANAIRIVGQSGHSSDPARGVNAIDLMHETIGRLMELRKTLQERFNNPAFAVPYPTMNFG HINGGDAANRICACCELHLDIRPLPGMTLDNINELMQQTLEPVSQRWPGRLSIEELHASVPGYECPTDHHMVAVIEKLLG TRTQVVNYCTEAPFVQQVCPTLVLGPGSIDQAHQPDEYIDTGFIEPTRKLLGQLVSHFCRQ >Mature_381_residues MKLPPFIELYRALIATPSISATDGALDQSNEALINLLAGWFADLGFRVDVQPVPDSRNKFNLLASIGEGSGGLLLAGHTD TVPYDEGRWTRDPFTLTEHDNKLYGLGTADMKGFFAFILDAVRDIDASQLTNPLYILATADEETTMAGARYFAASTSIRP DFAIIGEPTSLQPVRAHKGHIANAIRIVGQSGHSSDPARGVNAIDLMHETIGRLMELRKTLQERFNNPAFAVPYPTMNFG HINGGDAANRICACCELHLDIRPLPGMTLDNINELMQQTLEPVSQRWPGRLSIEELHASVPGYECPTDHHMVAVIEKLLG TRTQVVNYCTEAPFVQQVCPTLVLGPGSIDQAHQPDEYIDTGFIEPTRKLLGQLVSHFCRQ
Specific function: Displays A Broad Specificity And Can Also Deacylate Substrates Such As Acetylarginine, Acetylhistidine Or Acetylglutamate Semialdehyde. [C]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family. ArgE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790395, Length=378, Percent_Identity=75.6613756613757, Blast_Score=627, Evalue=0.0, Organism=Escherichia coli, GI1789236, Length=373, Percent_Identity=26.2734584450402, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788816, Length=259, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17551016, Length=388, Percent_Identity=26.0309278350515, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010169 - InterPro: IPR001261 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.16 [H]
Molecular weight: Translated: 41829; Mature: 41829
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00758 ARGE_DAPE_CPG2_1 ; PS00759 ARGE_DAPE_CPG2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPPFIELYRALIATPSISATDGALDQSNEALINLLAGWFADLGFRVDVQPVPDSRNKF CCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCE NLLASIGEGSGGLLLAGHTDTVPYDEGRWTRDPFTLTEHDNKLYGLGTADMKGFFAFILD EEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHH AVRDIDASQLTNPLYILATADEETTMAGARYFAASTSIRPDFAIIGEPTSLQPVRAHKGH HHHCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHCCH IANAIRIVGQSGHSSDPARGVNAIDLMHETIGRLMELRKTLQERFNNPAFAVPYPTMNFG HHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC HINGGDAANRICACCELHLDIRPLPGMTLDNINELMQQTLEPVSQRWPGRLSIEELHASV CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC PGYECPTDHHMVAVIEKLLGTRTQVVNYCTEAPFVQQVCPTLVLGPGSIDQAHQPDEYID CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCHHEEECCCCCCCCCCCHHHHH TGFIEPTRKLLGQLVSHFCRQ CCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLPPFIELYRALIATPSISATDGALDQSNEALINLLAGWFADLGFRVDVQPVPDSRNKF CCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCE NLLASIGEGSGGLLLAGHTDTVPYDEGRWTRDPFTLTEHDNKLYGLGTADMKGFFAFILD EEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHH AVRDIDASQLTNPLYILATADEETTMAGARYFAASTSIRPDFAIIGEPTSLQPVRAHKGH HHHCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHCCH IANAIRIVGQSGHSSDPARGVNAIDLMHETIGRLMELRKTLQERFNNPAFAVPYPTMNFG HHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC HINGGDAANRICACCELHLDIRPLPGMTLDNINELMQQTLEPVSQRWPGRLSIEELHASV CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC PGYECPTDHHMVAVIEKLLGTRTQVVNYCTEAPFVQQVCPTLVLGPGSIDQAHQPDEYID CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCHHEEECCCCCCCCCCCHHHHH TGFIEPTRKLLGQLVSHFCRQ CCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA