Click here to switch to the map view.

The map label for this gene is yijD [H]

Identifier: 157373004

GI number: 157373004

Start: 5286761

End: 5287129

Strand: Reverse

Name: yijD [H]

Synonym: Spro_4772

Alternate gene names: 157373004

Gene position: 5287129-5286761 (Counterclockwise)

Preceding gene: 157373005

Following gene: 157373002

Centisome position: 97.03

GC content: 56.91

Gene sequence:

>369_bases
ATGGAAAAACCAAGCCGTGAGAATGGCACCTTACTGCTGGCGTTGATTGCCGGCCTCTCGATCAACGGTTCGTTCGCCGC
GTTGTTCAGCTCGGTGGTGCCGTTTTCGATTTTCCCTATCCTGACTTTGGTGCTGGCGGTTTACTGTCTGCACCAGCGTT
ATTTGCACCGTGCGATGCCGGACGGCATGCCCAAGCTGGCCGCAGCAACCTTCCTGTTGGGGGTGTTGTTGTACAGTGCG
ATCGTCCGGGCCGAATACCCGCAGATTGGCTCTAACTTCCTGCCGGCGATTATTTCCGTGGCGTTGGTGTTCTGGATTGG
TATCAAGCTGAAGGCGCGCAAGGCGCTGGATGAGAATACGCCGGCCTGA

Upstream 100 bases:

>100_bases
TTAGTGCTGCAACTGCGGATGATTTCCAAAGGTGCTTATTATTGGTATCGCCGCCAACAAGAAAAAGCTTCTGTATCCCA
CGTATAAAAGGTAGAAAGCG

Downstream 100 bases:

>100_bases
TGGGCGTAAAGCAGGGGCGCAGCAATAATGGCGCCCCTGTCAGATTAGACGCGTTTTTCCAACAGCACGCCGCATTCCAT
GTGATGGGTGTACGGGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MEKPSRENGTLLLALIAGLSINGSFAALFSSVVPFSIFPILTLVLAVYCLHQRYLHRAMPDGMPKLAAATFLLGVLLYSA
IVRAEYPQIGSNFLPAIISVALVFWIGIKLKARKALDENTPA

Sequences:

>Translated_122_residues
MEKPSRENGTLLLALIAGLSINGSFAALFSSVVPFSIFPILTLVLAVYCLHQRYLHRAMPDGMPKLAAATFLLGVLLYSA
IVRAEYPQIGSNFLPAIISVALVFWIGIKLKARKALDENTPA
>Mature_122_residues
MEKPSRENGTLLLALIAGLSINGSFAALFSSVVPFSIFPILTLVLAVYCLHQRYLHRAMPDGMPKLAAATFLLGVLLYSA
IVRAEYPQIGSNFLPAIISVALVFWIGIKLKARKALDENTPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790402, Length=114, Percent_Identity=71.0526315789474, Blast_Score=178, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009867
- ProDom:   PD076479 [H]

Pfam domain/function: PF07226 DUF1422 [H]

EC number: NA

Molecular weight: Translated: 13229; Mature: 13229

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKPSRENGTLLLALIAGLSINGSFAALFSSVVPFSIFPILTLVLAVYCLHQRYLHRAMP
CCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGMPKLAAATFLLGVLLYSAIVRAEYPQIGSNFLPAIISVALVFWIGIKLKARKALDENT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PA
CC
>Mature Secondary Structure
MEKPSRENGTLLLALIAGLSINGSFAALFSSVVPFSIFPILTLVLAVYCLHQRYLHRAMP
CCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGMPKLAAATFLLGVLLYSAIVRAEYPQIGSNFLPAIISVALVFWIGIKLKARKALDENT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]