Definition | Serratia proteamaculans 568 chromosome, complete genome. |
---|---|
Accession | NC_009832 |
Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is 157372985
Identifier: 157372985
GI number: 157372985
Start: 5258171
End: 5258872
Strand: Reverse
Name: 157372985
Synonym: Spro_4753
Alternate gene names: NA
Gene position: 5258872-5258171 (Counterclockwise)
Preceding gene: 157372986
Following gene: 157372983
Centisome position: 96.51
GC content: 55.98
Gene sequence:
>702_bases ATGACGCAGCAATTTAATGGTTTTAGCCAGCAGGGCCTGAATTTTCTTCAGCAGGTGCGCATTGAGAACGACAAGGAATG GTTTGAGGCCAACCGTGACGTTTACGATCGTGAACTATTAACGCCATTCCGTACGTTGGTAGCCGAACTGAGCCCGGCGA TGTTGGCGATCGATCCCCTGTTCGAGACCCGGCCGGCGATCGGGAAAACGCTGTCGCGCATACATCGCGACACGCGTTTT TCCCACGACAAATCGCGCTACCGCAGTCGCATGTGGCTGACGTTCAAACGGCCAAGCAAAGACTGGAAGGACGCGCCGGT CTACTTCTTCGAACTGGGGCCGGACATGTTGCGTTACGGGCTGGGTTATTACAGTGCCAACAAACCGACCATGGATCTGT TTCGCCATACGCTGCAACGCCGACCGCAGCCCTTTTTAGAGGTCGCGGCCTGCTGCCAGCCACCGTTCGAGCTGGTGGGT GAAAGCTACAAGCGGCCGTTGGTGAAAGAGCAGGCGCCAGAAATTGCCACCTGGTACAACCGCAAATCCTTTGCGGTGAT GGCGACCGACAGTCAGGTGGAAAAGCTGTTCAACGCCGGGTTGGTGCAGACTCTGGCGCAAGGCTTTCTGCAACTGGAAC CGCTCTATCACTGGCTGATGCAGGTAGAGGCGATGAAGCAAGTTGATCCCTCTGACCTATGA
Upstream 100 bases:
>100_bases GTTGCCTATTTCAGGACGCGCCGGCGCGTTTTTCTAAAGCGCCGTTGGCAGATGGAAGCCATGCATAATCCCCGCTAGAA AGCTTGTTACGGGAAGGAAC
Downstream 100 bases:
>100_bases AAGTAAGCGCCAGAAAGCGTCGATCAGCGGATCGCTGAGGCGTTTTTTCTGCACGCAGACCCCCAGCTCGAACGGCTCGA CCATGGAAATATTCTCCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTQQFNGFSQQGLNFLQQVRIENDKEWFEANRDVYDRELLTPFRTLVAELSPAMLAIDPLFETRPAIGKTLSRIHRDTRF SHDKSRYRSRMWLTFKRPSKDWKDAPVYFFELGPDMLRYGLGYYSANKPTMDLFRHTLQRRPQPFLEVAACCQPPFELVG ESYKRPLVKEQAPEIATWYNRKSFAVMATDSQVEKLFNAGLVQTLAQGFLQLEPLYHWLMQVEAMKQVDPSDL
Sequences:
>Translated_233_residues MTQQFNGFSQQGLNFLQQVRIENDKEWFEANRDVYDRELLTPFRTLVAELSPAMLAIDPLFETRPAIGKTLSRIHRDTRF SHDKSRYRSRMWLTFKRPSKDWKDAPVYFFELGPDMLRYGLGYYSANKPTMDLFRHTLQRRPQPFLEVAACCQPPFELVG ESYKRPLVKEQAPEIATWYNRKSFAVMATDSQVEKLFNAGLVQTLAQGFLQLEPLYHWLMQVEAMKQVDPSDL >Mature_232_residues TQQFNGFSQQGLNFLQQVRIENDKEWFEANRDVYDRELLTPFRTLVAELSPAMLAIDPLFETRPAIGKTLSRIHRDTRFS HDKSRYRSRMWLTFKRPSKDWKDAPVYFFELGPDMLRYGLGYYSANKPTMDLFRHTLQRRPQPFLEVAACCQPPFELVGE SYKRPLVKEQAPEIATWYNRKSFAVMATDSQVEKLFNAGLVQTLAQGFLQLEPLYHWLMQVEAMKQVDPSDL
Specific function: Unknown
COG id: COG5587
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27369; Mature: 27237
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQFNGFSQQGLNFLQQVRIENDKEWFEANRDVYDRELLTPFRTLVAELSPAMLAIDPL CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH FETRPAIGKTLSRIHRDTRFSHDKSRYRSRMWLTFKRPSKDWKDAPVYFFELGPDMLRYG HHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCHHHHHHH LGYYSANKPTMDLFRHTLQRRPQPFLEVAACCQPPFELVGESYKRPLVKEQAPEIATWYN CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHCCCHHHHHC RKSFAVMATDSQVEKLFNAGLVQTLAQGFLQLEPLYHWLMQVEAMKQVDPSDL CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TQQFNGFSQQGLNFLQQVRIENDKEWFEANRDVYDRELLTPFRTLVAELSPAMLAIDPL CCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH FETRPAIGKTLSRIHRDTRFSHDKSRYRSRMWLTFKRPSKDWKDAPVYFFELGPDMLRYG HHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCHHHHHHH LGYYSANKPTMDLFRHTLQRRPQPFLEVAACCQPPFELVGESYKRPLVKEQAPEIATWYN CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHCCCHHHHHC RKSFAVMATDSQVEKLFNAGLVQTLAQGFLQLEPLYHWLMQVEAMKQVDPSDL CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA