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The map label for this gene is yhjD [H]

Identifier: 157372976

GI number: 157372976

Start: 5247497

End: 5248516

Strand: Direct

Name: yhjD [H]

Synonym: Spro_4744

Alternate gene names: 157372976

Gene position: 5247497-5248516 (Clockwise)

Preceding gene: 157372974

Following gene: 157372977

Centisome position: 96.3

GC content: 57.25

Gene sequence:

>1020_bases
ATGCCTACAGGATCAGATAAAGCCCCCCGACAGCCCAACAGTGAAGCGCCGCAAAAGCCGCTGATCGCCATCAAAACCGG
CCACCAGACTATTGACCGCCGCATCTCCGGTTTTTCACGCCTGGTCGAACGCATCAAGGCCTGGCCAAGCATCGCTCACC
TGCTGCGCGCCACCGAGCGCTTTAACGATCGTCTGGGCAGCCAGTTCGGCGCCGCTATCACCTATTTCTCGTTTCTTTCG
CTGATCCCGATTTTGATGGTGTCGTTTGCCGCCGTCGGCTTTGTGCTGGCATCCAATCCTGACCTGCTGACTGAGCTGAT
TAATAAGATTGTCGGCAGCATCAGTGACCCTACGCTGGCCAGCACGCTGAAAAACACCGTCAATACGGCGATTCAGCAGC
GCACCACCGTGGGGCTGACCGGTCTGGCGCTGGCGCTGTATTCAGGCATCAGTTGGATGGGTAACCTGCGTGAGGCGATC
CGCGCGCAGTCGCGTGACGTATGGGAACGTAATCCGCAGGATCAGGAAAAAATCTACTTCAAATACACCCGCGACTTTAT
TTCGCTGAGTGGATTGGTGGTGGCGCTGATTATCACCCTGACGCTGACCTCCATCGCCGGTTCGGCACAGGCGGCCATTG
TCCGTGCACTGGGCCTGGAGGGTATCGAGTGGCTGCGGCCGGCGATGACGCTGATTGCGCTGTCGATCTCCATCTTCGCC
AACTATCTGCTGTTCCTGTGGATCTTCTGGATGCTGCCGCGGCATAAGCCGAAGAAGAAGGCGCTGCTGCGTGGCACGCT
GCTTGCCGCCATCGGTTTCGAAGTGATTAAGTTTGTGATGACCATGACGCTGCCACAGGTGGCTAAATCGCCTTCCGGTG
CCGCCTTTGGTTCGGTAATCGGGTTGATGGCGTTTTTCTATTTCTTTGCCCGACTGACGCTTTTTTGCGCCGCCTGGATC
GCCACCGCGCAGTATAAAGAAGACAAAACTCTGCCAGCCTCCGAGCAATCCGCCCCCTAA

Upstream 100 bases:

>100_bases
CAAATTAGCCGGTTGCCCCACCCGGCGGCCAAATCAGCGCGCCTTTTGGCTATAATCAAGGCTGAGAGAGCCTATTTATC
GTTAAGGAAATCGTGACGTA

Downstream 100 bases:

>100_bases
AGCAATGCAATCATACCGGCCACTCTCTGGTGGCTGGTTTTTTATTCCGAAATTCAGCCTAAAACCCAGCACATAAAACC
AAAATATCAACACCACACCT

Product: putative ribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MPTGSDKAPRQPNSEAPQKPLIAIKTGHQTIDRRISGFSRLVERIKAWPSIAHLLRATERFNDRLGSQFGAAITYFSFLS
LIPILMVSFAAVGFVLASNPDLLTELINKIVGSISDPTLASTLKNTVNTAIQQRTTVGLTGLALALYSGISWMGNLREAI
RAQSRDVWERNPQDQEKIYFKYTRDFISLSGLVVALIITLTLTSIAGSAQAAIVRALGLEGIEWLRPAMTLIALSISIFA
NYLLFLWIFWMLPRHKPKKKALLRGTLLAAIGFEVIKFVMTMTLPQVAKSPSGAAFGSVIGLMAFFYFFARLTLFCAAWI
ATAQYKEDKTLPASEQSAP

Sequences:

>Translated_339_residues
MPTGSDKAPRQPNSEAPQKPLIAIKTGHQTIDRRISGFSRLVERIKAWPSIAHLLRATERFNDRLGSQFGAAITYFSFLS
LIPILMVSFAAVGFVLASNPDLLTELINKIVGSISDPTLASTLKNTVNTAIQQRTTVGLTGLALALYSGISWMGNLREAI
RAQSRDVWERNPQDQEKIYFKYTRDFISLSGLVVALIITLTLTSIAGSAQAAIVRALGLEGIEWLRPAMTLIALSISIFA
NYLLFLWIFWMLPRHKPKKKALLRGTLLAAIGFEVIKFVMTMTLPQVAKSPSGAAFGSVIGLMAFFYFFARLTLFCAAWI
ATAQYKEDKTLPASEQSAP
>Mature_338_residues
PTGSDKAPRQPNSEAPQKPLIAIKTGHQTIDRRISGFSRLVERIKAWPSIAHLLRATERFNDRLGSQFGAAITYFSFLSL
IPILMVSFAAVGFVLASNPDLLTELINKIVGSISDPTLASTLKNTVNTAIQQRTTVGLTGLALALYSGISWMGNLREAIR
AQSRDVWERNPQDQEKIYFKYTRDFISLSGLVVALIITLTLTSIAGSAQAAIVRALGLEGIEWLRPAMTLIALSISIFAN
YLLFLWIFWMLPRHKPKKKALLRGTLLAAIGFEVIKFVMTMTLPQVAKSPSGAAFGSVIGLMAFFYFFARLTLFCAAWIA
TAQYKEDKTLPASEQSAP

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789939, Length=330, Percent_Identity=70, Blast_Score=473, Evalue=1e-135,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005274
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 37315; Mature: 37184

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTGSDKAPRQPNSEAPQKPLIAIKTGHQTIDRRISGFSRLVERIKAWPSIAHLLRATER
CCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTELINKIVGSISDPTLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHH
STLKNTVNTAIQQRTTVGLTGLALALYSGISWMGNLREAIRAQSRDVWERNPQDQEKIYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KYTRDFISLSGLVVALIITLTLTSIAGSAQAAIVRALGLEGIEWLRPAMTLIALSISIFA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
NYLLFLWIFWMLPRHKPKKKALLRGTLLAAIGFEVIKFVMTMTLPQVAKSPSGAAFGSVI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GLMAFFYFFARLTLFCAAWIATAQYKEDKTLPASEQSAP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTGSDKAPRQPNSEAPQKPLIAIKTGHQTIDRRISGFSRLVERIKAWPSIAHLLRATER
CCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]