Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is 157372968
Identifier: 157372968
GI number: 157372968
Start: 5233003
End: 5233854
Strand: Reverse
Name: 157372968
Synonym: Spro_4736
Alternate gene names: NA
Gene position: 5233854-5233003 (Counterclockwise)
Preceding gene: 157372969
Following gene: 157372964
Centisome position: 96.05
GC content: 53.76
Gene sequence:
>852_bases ATGGATAACAATCACCAGAAATTCGATTCACAGTCGATAGCAAACCGGGTCAGGGAACTGTTTGTACATTATGGGATTGG TAAGCGTCAGCATGCCAAAGAGCTCAGCCGCATTCTGGATCTGAGTTTTTCGCATGCGCATCGTAAGCTGAAGGGGCAAA GTCCCTGGACTCTGGAGCAAATTAACAACGTCGCTGCGGCATTAGGGGAAACGCCTGCCGCGATCGTGGACACCGGCCCT GAAAATGTCATCTCTGCGCAAACTATGGTGCGAGATGCCATCTTTTACGTGGGTGGTGTGGAACTGGGTTGTGTGGCTTA TATCGGCCATGAGCTGGTTGGCGGACGTTCGTCGGAATATGTCGCGTTGCAGCAGGCGGGGCAATGGTGTCTTTATCGTG CGGATGATGCGCCGCTGGGGCAGCGTTTTTGCGTGGAGCTGATCGAGCTTCGCTCAGCCGCCGTCGAAGATGAGCGCCTG AGCATTGCGGTACTTGATGATTCACATCAGGCGGCCGATGAGCTGACCAAATACCTAAACAGCCGCGGTTTTCATGCGGT GGCATTTTATGATGTCAGCAGTTTTAACCTGGCGTTGCAGCAGAGCCTGTTCGATGGTTATGTGGTCGACTGGTTGATTG GTCAGGAAACGGCAGATCAATGTATTGCAGCCATCCGCGCCTCGGATAACCCGGATGCGCCGGTTCTGGTTCTCACCGGC CAGTTAGGGACCGATCAGCGCGAATCTGAAATCGCCAGGGCGATGCGCGACTATGACGTACTGGGCCCTTATGAAAAGCC AGTACGGCTCCATGTGATTGAAGCCGCACTGTTGCGCTGTTTTAATCTCTAG
Upstream 100 bases:
>100_bases TTTAGGTTATACATTGTACCATATACCAGTTTTGGATCGCTTTTTTGCACGGCAAGTATGAAAACGACTGAAAAAACAGC AAAAAAAATCGAAGGAAAAA
Downstream 100 bases:
>100_bases CGGCCAGCAGTGAAGCCAGTGCGGAAGACAACGCGTCCAGCCTGACCGGCTTCATCAGGTAATTGTCGAACAGCGCCCGC TGTTCGGCAGACAGTTGTTC
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator; Response Regulator Receiver
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MDNNHQKFDSQSIANRVRELFVHYGIGKRQHAKELSRILDLSFSHAHRKLKGQSPWTLEQINNVAAALGETPAAIVDTGP ENVISAQTMVRDAIFYVGGVELGCVAYIGHELVGGRSSEYVALQQAGQWCLYRADDAPLGQRFCVELIELRSAAVEDERL SIAVLDDSHQAADELTKYLNSRGFHAVAFYDVSSFNLALQQSLFDGYVVDWLIGQETADQCIAAIRASDNPDAPVLVLTG QLGTDQRESEIARAMRDYDVLGPYEKPVRLHVIEAALLRCFNL
Sequences:
>Translated_283_residues MDNNHQKFDSQSIANRVRELFVHYGIGKRQHAKELSRILDLSFSHAHRKLKGQSPWTLEQINNVAAALGETPAAIVDTGP ENVISAQTMVRDAIFYVGGVELGCVAYIGHELVGGRSSEYVALQQAGQWCLYRADDAPLGQRFCVELIELRSAAVEDERL SIAVLDDSHQAADELTKYLNSRGFHAVAFYDVSSFNLALQQSLFDGYVVDWLIGQETADQCIAAIRASDNPDAPVLVLTG QLGTDQRESEIARAMRDYDVLGPYEKPVRLHVIEAALLRCFNL >Mature_283_residues MDNNHQKFDSQSIANRVRELFVHYGIGKRQHAKELSRILDLSFSHAHRKLKGQSPWTLEQINNVAAALGETPAAIVDTGP ENVISAQTMVRDAIFYVGGVELGCVAYIGHELVGGRSSEYVALQQAGQWCLYRADDAPLGQRFCVELIELRSAAVEDERL SIAVLDDSHQAADELTKYLNSRGFHAVAFYDVSSFNLALQQSLFDGYVVDWLIGQETADQCIAAIRASDNPDAPVLVLTG QLGTDQRESEIARAMRDYDVLGPYEKPVRLHVIEAALLRCFNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31362; Mature: 31362
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNNHQKFDSQSIANRVRELFVHYGIGKRQHAKELSRILDLSFSHAHRKLKGQSPWTLEQ CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH INNVAAALGETPAAIVDTGPENVISAQTMVRDAIFYVGGVELGCVAYIGHELVGGRSSEY HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCE VALQQAGQWCLYRADDAPLGQRFCVELIELRSAAVEDERLSIAVLDDSHQAADELTKYLN EEHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH SRGFHAVAFYDVSSFNLALQQSLFDGYVVDWLIGQETADQCIAAIRASDNPDAPVLVLTG CCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEEC QLGTDQRESEIARAMRDYDVLGPYEKPVRLHVIEAALLRCFNL CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MDNNHQKFDSQSIANRVRELFVHYGIGKRQHAKELSRILDLSFSHAHRKLKGQSPWTLEQ CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH INNVAAALGETPAAIVDTGPENVISAQTMVRDAIFYVGGVELGCVAYIGHELVGGRSSEY HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCE VALQQAGQWCLYRADDAPLGQRFCVELIELRSAAVEDERLSIAVLDDSHQAADELTKYLN EEHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH SRGFHAVAFYDVSSFNLALQQSLFDGYVVDWLIGQETADQCIAAIRASDNPDAPVLVLTG CCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEEC QLGTDQRESEIARAMRDYDVLGPYEKPVRLHVIEAALLRCFNL CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA