| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yhiQ [C]
Identifier: 157372932
GI number: 157372932
Start: 5194432
End: 5195178
Strand: Reverse
Name: yhiQ [C]
Synonym: Spro_4700
Alternate gene names: 157372932
Gene position: 5195178-5194432 (Counterclockwise)
Preceding gene: 157372933
Following gene: 157372931
Centisome position: 95.34
GC content: 61.71
Gene sequence:
>747_bases GTGAGCGTGTGTTTATTGTGTGAAGAAGGCGCCGACCCCGGCGCCTTGTCTATTCTGGCGCAGCGCTGGCAGTTAACTTC GGACGACGAGGCGCTGATGGCGCTGGTATTGACGCCCGAAAGGCTGGAGCTGCGCAAGCGTGACGAACCCAAACTCGGGG CGATCTACGTCGATTTTGTCTCTGGCACCATGGCGCATCGGCGCAAATTTGGCGGCGGGCGCGGTGAAGCGGTGGCGAAG GCGGTTGGCATCAAGGGCAATTACCGGCCTGACGTGGTAGACGCCACTGCCGGCCTGGGGCGCGATGCCTTTGTGCTGGC CTCTCTGGGGTGCCGGGTGCGGATGCTGGAGCGTAATCCGGTGGTGGCGGCATTGCTGGATGACGGCCTGCAGCGTGGCT ATCAGGATGCGGAGATCGGCCCATGGTTGCGCGAACGCATGACGCTGTTGCATGCCTCCAGCCTGACGGCGTTGGGGGAT ATTGATCCACGGCCGGAGGTGGTGTACCTCGATCCGATGTACCCGCATAAGCAGAAAAGTGCGTTGGTGAAAAAGGAGAT GCGGGTGTTCCAGTCGCTGGTGGGCAGCGATGATGACGCAGATGGCCTGCTGGAACCGGCACGTCGTCTGGCGACCAAGC GCGTGGTGGTGAAACGCCCGGATTATGCCCCGCCGTTGGCGAATGTGCAGGCGCATGCGGCGTCGACGACAAAAAGTCAC CGTTTCGATATCTACATGCCCGTGTAA
Upstream 100 bases:
>100_bases GTTCGGAAGAGCCGATGGAACTGTTCAAACGCTTCCGTGGCCGTGAGCCGCAGCTGGATGCTATGCTGCGCCATTACGGC ATTAAAGGATAACCCCACCG
Downstream 100 bases:
>100_bases ATATTTATGCCCGCGGGCTCAGAGTGCTGAGTTCGCGGTTCAATCTGATCTACCTCCCAATTCTCTGAATCCGCTTGAAA TCCCTCTGGCAAAAATGCCA
Product: putative methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSVCLLCEEGADPGALSILAQRWQLTSDDEALMALVLTPERLELRKRDEPKLGAIYVDFVSGTMAHRRKFGGGRGEAVAK AVGIKGNYRPDVVDATAGLGRDAFVLASLGCRVRMLERNPVVAALLDDGLQRGYQDAEIGPWLRERMTLLHASSLTALGD IDPRPEVVYLDPMYPHKQKSALVKKEMRVFQSLVGSDDDADGLLEPARRLATKRVVVKRPDYAPPLANVQAHAASTTKSH RFDIYMPV
Sequences:
>Translated_248_residues MSVCLLCEEGADPGALSILAQRWQLTSDDEALMALVLTPERLELRKRDEPKLGAIYVDFVSGTMAHRRKFGGGRGEAVAK AVGIKGNYRPDVVDATAGLGRDAFVLASLGCRVRMLERNPVVAALLDDGLQRGYQDAEIGPWLRERMTLLHASSLTALGD IDPRPEVVYLDPMYPHKQKSALVKKEMRVFQSLVGSDDDADGLLEPARRLATKRVVVKRPDYAPPLANVQAHAASTTKSH RFDIYMPV >Mature_247_residues SVCLLCEEGADPGALSILAQRWQLTSDDEALMALVLTPERLELRKRDEPKLGAIYVDFVSGTMAHRRKFGGGRGEAVAKA VGIKGNYRPDVVDATAGLGRDAFVLASLGCRVRMLERNPVVAALLDDGLQRGYQDAEIGPWLRERMTLLHASSLTALGDI DPRPEVVYLDPMYPHKQKSALVKKEMRVFQSLVGSDDDADGLLEPARRLATKRVVVKRPDYAPPLANVQAHAASTTKSHR FDIYMPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0341 family
Homologues:
Organism=Escherichia coli, GI1789912, Length=245, Percent_Identity=81.6326530612245, Blast_Score=401, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4700_SERP5 (A8GL03)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001480921.1 - ProteinModelPortal: A8GL03 - SMR: A8GL03 - STRING: A8GL03 - GeneID: 5607393 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_4700 - eggNOG: COG0500 - HOGENOM: HBG563235 - OMA: HRVVVKR - ProtClustDB: PRK10742 - BioCyc: SPRO399741:SPRO_4700-MONOMER - HAMAP: MF_01523 - InterPro: IPR007536
Pfam domain/function: PF04445 DUF548
EC number: NA
Molecular weight: Translated: 27248; Mature: 27117
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVCLLCEEGADPGALSILAQRWQLTSDDEALMALVLTPERLELRKRDEPKLGAIYVDFV CCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHCCCCCCEEEEEEEEH SGTMAHRRKFGGGRGEAVAKAVGIKGNYRPDVVDATAGLGRDAFVLASLGCRVRMLERNP HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHCCCEEEEEECCC VVAALLDDGLQRGYQDAEIGPWLRERMTLLHASSLTALGDIDPRPEVVYLDPMYPHKQKS EEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHH ALVKKEMRVFQSLVGSDDDADGLLEPARRLATKRVVVKRPDYAPPLANVQAHAASTTKSH HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHCCCCCCC RFDIYMPV EEEEEECC >Mature Secondary Structure SVCLLCEEGADPGALSILAQRWQLTSDDEALMALVLTPERLELRKRDEPKLGAIYVDFV CEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHCCCCCCEEEEEEEEH SGTMAHRRKFGGGRGEAVAKAVGIKGNYRPDVVDATAGLGRDAFVLASLGCRVRMLERNP HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHCCCEEEEEECCC VVAALLDDGLQRGYQDAEIGPWLRERMTLLHASSLTALGDIDPRPEVVYLDPMYPHKQKS EEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHH ALVKKEMRVFQSLVGSDDDADGLLEPARRLATKRVVVKRPDYAPPLANVQAHAASTTKSH HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHCCCCCCC RFDIYMPV EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA