| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is mrpA [H]
Identifier: 157372909
GI number: 157372909
Start: 5168126
End: 5168665
Strand: Direct
Name: mrpA [H]
Synonym: Spro_4677
Alternate gene names: 157372909
Gene position: 5168126-5168665 (Clockwise)
Preceding gene: 157372908
Following gene: 157372910
Centisome position: 94.85
GC content: 55.56
Gene sequence:
>540_bases ATGCGTTTACGCGCTTTAGCGATGCTCAGTTGCACGCCCTTTTGGTTTACAACATTGCCGACTCTGGCGGATACCGAGTT GGTCGGGTCTCCGCTGCAGTTCCACGGCACCGTGGTGAGCCGGCCGTGCAACATTGAGCCGCAATCGGCCGATCAGGTGG TGGAAATGGACACGGTGATCGTCAAAACCCTGTACCGCTATGGGCATAGCAACCCGGTACCGTTCAACATCAAGCTGACC GACTGTAAAACGTCGGTATTCAAATCCGTCAACGTTACCTTCAGCGGTACCGAAGACAGTGAACTGCCGGGCAAGCTGGC GATCAATAACGGCACCAACGGCGCCGCTATCGCCCTGTTTGACAGCAAGGGGGCCGATATTGATTTGAACCAGGCCACCA GCGCGGTGGCATTGCAGGATGGCGCCAACATTCTGAACTTTACCGCCTATGTGCAGGGCCACCCCAGCGCGATACAGAAT AAAACCATTACCGAGGGTGAGTTCAGCTCGGTGGCCAATTTCGTGCTGGCCTATCAATAA
Upstream 100 bases:
>100_bases CGCCCCCTTGGCCAACGGTAGCAAGGAAATCGCAGAAGGGGAATTTAACGCCTCGGCCACCATTGTGGCGGCCTTCGAGT AATTCAGGGAGAAACAGACG
Downstream 100 bases:
>100_bases GCCCGGCATCTGCAGGAAGAAGTGATGATATCCAAATCCAAAACAGCCTGGTTATTCGGGCTGGCGGCGTTTTATTGCCT GATTGCCATGCATATTTACT
Product: fimbrial protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MRLRALAMLSCTPFWFTTLPTLADTELVGSPLQFHGTVVSRPCNIEPQSADQVVEMDTVIVKTLYRYGHSNPVPFNIKLT DCKTSVFKSVNVTFSGTEDSELPGKLAINNGTNGAAIALFDSKGADIDLNQATSAVALQDGANILNFTAYVQGHPSAIQN KTITEGEFSSVANFVLAYQ
Sequences:
>Translated_179_residues MRLRALAMLSCTPFWFTTLPTLADTELVGSPLQFHGTVVSRPCNIEPQSADQVVEMDTVIVKTLYRYGHSNPVPFNIKLT DCKTSVFKSVNVTFSGTEDSELPGKLAINNGTNGAAIALFDSKGADIDLNQATSAVALQDGANILNFTAYVQGHPSAIQN KTITEGEFSSVANFVLAYQ >Mature_179_residues MRLRALAMLSCTPFWFTTLPTLADTELVGSPLQFHGTVVSRPCNIEPQSADQVVEMDTVIVKTLYRYGHSNPVPFNIKLT DCKTSVFKSVNVTFSGTEDSELPGKLAINNGTNGAAIALFDSKGADIDLNQATSAVALQDGANILNFTAYVQGHPSAIQN KTITEGEFSSVANFVLAYQ
Specific function: Major structural component of mannose-resistant/proteus- like fimbriae of P.mirabilis [H]
COG id: COG3539
COG function: function code NU; P pilus assembly protein, pilin FimA
Gene ontology:
Cell location: Fimbrium [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fimbrial protein family [H]
Homologues:
Organism=Escherichia coli, GI87082421, Length=170, Percent_Identity=30.5882352941176, Blast_Score=70, Evalue=5e-14, Organism=Escherichia coli, GI1788674, Length=144, Percent_Identity=34.0277777777778, Blast_Score=67, Evalue=5e-13, Organism=Escherichia coli, GI87081805, Length=149, Percent_Identity=35.5704697986577, Blast_Score=61, Evalue=4e-11, Organism=Escherichia coli, GI1790769, Length=129, Percent_Identity=34.1085271317829, Blast_Score=60, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008966 - InterPro: IPR000259 - InterPro: IPR014779 [H]
Pfam domain/function: PF00419 Fimbrial [H]
EC number: NA
Molecular weight: Translated: 19263; Mature: 19263
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRALAMLSCTPFWFTTLPTLADTELVGSPLQFHGTVVSRPCNIEPQSADQVVEMDTVI CCCCEEEEEECCCHHHHHCCCCCCHHHCCCCCEECCEEECCCCCCCCCCCCHHHHHHHHH VKTLYRYGHSNPVPFNIKLTDCKTSVFKSVNVTFSGTEDSELPGKLAINNGTNGAAIALF HHHHHHHCCCCCCEEEEEEECCCHHHHEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEE DSKGADIDLNQATSAVALQDGANILNFTAYVQGHPSAIQNKTITEGEFSSVANFVLAYQ CCCCCCEECCCCCCEEEECCCCCEEEEEEEEECCCHHHCCCCCCCCCHHHHHHEEEECC >Mature Secondary Structure MRLRALAMLSCTPFWFTTLPTLADTELVGSPLQFHGTVVSRPCNIEPQSADQVVEMDTVI CCCCEEEEEECCCHHHHHCCCCCCHHHCCCCCEECCEEECCCCCCCCCCCCHHHHHHHHH VKTLYRYGHSNPVPFNIKLTDCKTSVFKSVNVTFSGTEDSELPGKLAINNGTNGAAIALF HHHHHHHCCCCCCEEEEEEECCCHHHHEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEE DSKGADIDLNQATSAVALQDGANILNFTAYVQGHPSAIQNKTITEGEFSSVANFVLAYQ CCCCCCEECCCCCCEEEECCCCCEEEEEEEEECCCHHHCCCCCCCCCHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8093447; 7910820 [H]