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The map label for this gene is pmfE [H]

Identifier: 157372908

GI number: 157372908

Start: 5167103

End: 5168107

Strand: Direct

Name: pmfE [H]

Synonym: Spro_4676

Alternate gene names: 157372908

Gene position: 5167103-5168107 (Clockwise)

Preceding gene: 157372907

Following gene: 157372909

Centisome position: 94.83

GC content: 51.64

Gene sequence:

>1005_bases
ATGAAAAAAACCTATCTGAGCCACTGCTTGCCACTGGCGTTGCTGCTGTCAGCCCCTGCCGTCTGGGCCAACGGTTATGT
AACGCCGGATGGTGGCCCGAAGCAGTTTTATATCGACCTGAATGAAAGCAACATTACCAATACCGTCGGCTTTACCAAGC
AGTTTCTCTATGATCTCGGCGGTACCTATACCGGCAAAGTCTATTGCGATACGCCAATTCCTACCAGCCCGCACTTTTAT
AAATCGGATTCGGCGTTACCGCCTTCCGAATACGGTAACGGTTATTTAAAACTTAATGATTTCCTGGATTTAAAAGCCGA
GGTTTGGATCGCCGGTAATAAAAACGCCTATATCACGGTGCCGTTTTATAACGAGTCCAACCTGTTAAGCCAACATTCCT
GTCGGCCACCCTATTTGCAGGTCAATAACTACGGCAGCGGATCTAAAGGCAAGATCACCTTCCGGGTGCGCAAAAAAATC
ATCAACGGCGTACAGATTAATGACCGCCAAATCATCGAGATGTATGGCCGCTTAGGGTCGACCGACGGCGGTTTCGGCCC
CAACCCTATGGCGCAGGTATTTATTCAGTCCGCCATCCTCTACGTACCGGACAAATGCGTGGTGAACGAAGGGCAGTTGA
TCAACGTTGAGTTCGGTGAAATCAGCGGCAGCAACCTGGACGGCAAAAGTTATCCGCAAAGCATTCCGGTGCGCTTCCAG
TGTGAAGGCGGCAGCTTTGAGGACGGCACGCTGAATATCAAACTGGCGGTCTCCGGCACCCCGGCGCCCTTCACCAATAA
CGCGTTTAAGACCGATAAAACCGATCTCGGCATCGAGATCAAACATAACGGCCAGTTGGTTATCCCGAATGAGTTTTACC
CGGTGCCGAATATCGGTAACGGCGGCAGTTGGAACCTGGTTGCCGCCCCCTTGGCCAACGGTAGCAAGGAAATCGCAGAA
GGGGAATTTAACGCCTCGGCCACCATTGTGGCGGCCTTCGAGTAA

Upstream 100 bases:

>100_bases
TCAGTGCCAGCGTGGAATCCACGCAGCGGGCGGTAATGGCGGCCGGTTTTTCCGGCGTGGCACATATTCAGGTGATTTAC
CTGTGAGGTTCACAAACACG

Downstream 100 bases:

>100_bases
TTCAGGGAGAAACAGACGATGCGTTTACGCGCTTTAGCGATGCTCAGTTGCACGCCCTTTTGGTTTACAACATTGCCGAC
TCTGGCGGATACCGAGTTGG

Product: type I pilus assembly protein FimE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKKTYLSHCLPLALLLSAPAVWANGYVTPDGGPKQFYIDLNESNITNTVGFTKQFLYDLGGTYTGKVYCDTPIPTSPHFY
KSDSALPPSEYGNGYLKLNDFLDLKAEVWIAGNKNAYITVPFYNESNLLSQHSCRPPYLQVNNYGSGSKGKITFRVRKKI
INGVQINDRQIIEMYGRLGSTDGGFGPNPMAQVFIQSAILYVPDKCVVNEGQLINVEFGEISGSNLDGKSYPQSIPVRFQ
CEGGSFEDGTLNIKLAVSGTPAPFTNNAFKTDKTDLGIEIKHNGQLVIPNEFYPVPNIGNGGSWNLVAAPLANGSKEIAE
GEFNASATIVAAFE

Sequences:

>Translated_334_residues
MKKTYLSHCLPLALLLSAPAVWANGYVTPDGGPKQFYIDLNESNITNTVGFTKQFLYDLGGTYTGKVYCDTPIPTSPHFY
KSDSALPPSEYGNGYLKLNDFLDLKAEVWIAGNKNAYITVPFYNESNLLSQHSCRPPYLQVNNYGSGSKGKITFRVRKKI
INGVQINDRQIIEMYGRLGSTDGGFGPNPMAQVFIQSAILYVPDKCVVNEGQLINVEFGEISGSNLDGKSYPQSIPVRFQ
CEGGSFEDGTLNIKLAVSGTPAPFTNNAFKTDKTDLGIEIKHNGQLVIPNEFYPVPNIGNGGSWNLVAAPLANGSKEIAE
GEFNASATIVAAFE
>Mature_334_residues
MKKTYLSHCLPLALLLSAPAVWANGYVTPDGGPKQFYIDLNESNITNTVGFTKQFLYDLGGTYTGKVYCDTPIPTSPHFY
KSDSALPPSEYGNGYLKLNDFLDLKAEVWIAGNKNAYITVPFYNESNLLSQHSCRPPYLQVNNYGSGSKGKITFRVRKKI
INGVQINDRQIIEMYGRLGSTDGGFGPNPMAQVFIQSAILYVPDKCVVNEGQLINVEFGEISGSNLDGKSYPQSIPVRFQ
CEGGSFEDGTLNIKLAVSGTPAPFTNNAFKTDKTDLGIEIKHNGQLVIPNEFYPVPNIGNGGSWNLVAAPLANGSKEIAE
GEFNASATIVAAFE

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36350; Mature: 36350

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTYLSHCLPLALLLSAPAVWANGYVTPDGGPKQFYIDLNESNITNTVGFTKQFLYDLG
CCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCC
GTYTGKVYCDTPIPTSPHFYKSDSALPPSEYGNGYLKLNDFLDLKAEVWIAGNKNAYITV
CCEEEEEEECCCCCCCCCEECCCCCCCCHHHCCCEEEEECEECCEEEEEEECCCCEEEEE
PFYNESNLLSQHSCRPPYLQVNNYGSGSKGKITFRVRKKIINGVQINDRQIIEMYGRLGS
EEECCCCCHHHCCCCCCEEEEECCCCCCCCEEEEEEEHHHHCCEEECCHHHHHHHHCCCC
TDGGFGPNPMAQVFIQSAILYVPDKCVVNEGQLINVEFGEISGSNLDGKSYPQSIPVRFQ
CCCCCCCCHHHHHHHHHHHEECCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEE
CEGGSFEDGTLNIKLAVSGTPAPFTNNAFKTDKTDLGIEIKHNGQLVIPNEFYPVPNIGN
ECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCC
GGSWNLVAAPLANGSKEIAEGEFNASATIVAAFE
CCCEEEEEEECCCCCHHHHCCCCCCCEEEEEEEC
>Mature Secondary Structure
MKKTYLSHCLPLALLLSAPAVWANGYVTPDGGPKQFYIDLNESNITNTVGFTKQFLYDLG
CCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCC
GTYTGKVYCDTPIPTSPHFYKSDSALPPSEYGNGYLKLNDFLDLKAEVWIAGNKNAYITV
CCEEEEEEECCCCCCCCCEECCCCCCCCHHHCCCEEEEECEECCEEEEEEECCCCEEEEE
PFYNESNLLSQHSCRPPYLQVNNYGSGSKGKITFRVRKKIINGVQINDRQIIEMYGRLGS
EEECCCCCHHHCCCCCCEEEEECCCCCCCCEEEEEEEHHHHCCEEECCHHHHHHHHCCCC
TDGGFGPNPMAQVFIQSAILYVPDKCVVNEGQLINVEFGEISGSNLDGKSYPQSIPVRFQ
CCCCCCCCHHHHHHHHHHHEECCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEE
CEGGSFEDGTLNIKLAVSGTPAPFTNNAFKTDKTDLGIEIKHNGQLVIPNEFYPVPNIGN
ECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCC
GGSWNLVAAPLANGSKEIAEGEFNASATIVAAFE
CCCEEEEEEECCCCCHHHHCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7959033 [H]