| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372897
Identifier: 157372897
GI number: 157372897
Start: 5156606
End: 5157442
Strand: Direct
Name: 157372897
Synonym: Spro_4665
Alternate gene names: NA
Gene position: 5156606-5157442 (Clockwise)
Preceding gene: 157372896
Following gene: 157372903
Centisome position: 94.64
GC content: 54.96
Gene sequence:
>837_bases ATGACCATTGCGCCAGACCGTTTTTGTATCAACCGCAAGATCGCCCCCAATCTCGATTTGGAGCCGTTTTTCAGCCTGGT AAAAAAGTGCGGGCTCAGCAAAGTTGAGCTGCGCAACGATATGCCGAGCGGCAAGGTGACAGATAACCTGAGCAACGATC AATTAAATGCTTTGGCGGCCAAATACGGTATCGAAATCGTCACCATTAACGCCCTCGGCAAGTTTAACCTGCCAGGCGAT AGTGCCATATTGCTGCAAAACGCCGAGGCGCTGTTGTCGCAGGCTCAGGCGATCCATAGCCAGGCGCTGGTACTGTGTCC ACACTGCAGCGCGGACGATCGGCGCAGTGAGGAGCAGAAAAAAACCGATACGCTGGCGGCGCTGAAGCTGCTGGCTCCCC TGTTCAAGCAATATGGCGTGCAGGGCTACGTCGAGCCGCTGGGGTTCGGTATCAGTTCACTGCGCTCATCGCTGCTGACG CAATCCCTGATTCGCGACTCCGGCGCGCCGTACAAGATCGTGCTGGATACCTTCCACCACTATTTAAGTGATGTGACGCA GCCTGAGTTTGATGAGCAGATTCAGATTGAGGGTATCGGTCTGGTACACCTTTCCGGGGTGGAAGATGCGCGAAGCAAAA GCGCGCTCAGCGACGAAGAACGCATTATGTTGAGTCAACAGGATCGGTTGGAGAGCAGAAAACAGGTGCAGAATCTGGAG CGCCTGGGCTACACCGGCATTTACGCCTTCGAGCCGTTCTCTTCGCAGTTGGATAGCTGGACAGAGGCGGATATCGAACG TGAAATCCGCCAGAGCATCGCTCTGCTGCAAGGGTAA
Upstream 100 bases:
>100_bases ATGGCCAAACGCTATCGCCAAGCGCCACCCGAAACACAACGCACGCCGCTGTAAGTCGGCAATTCTCAGGCTGTATCAAA CCATTCAGGAGTAATGCATC
Downstream 100 bases:
>100_bases TCGACAGTAAAACGACCTCTTCGGAGGTAATGCCGATCAGTTAAGCAAAGTTCTGAATAAGAATGTACGACGTTGTTTAA GTGGGCGTCCCCCTCTCCCG
Product: xylose isomerase domain-containing protein
Products: NA
Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Cytoplasmic Protein; Myo-Inositol Catabolism Protein; IolI Protein; Sugar Epimerase; Sugar Epimerase Protein; Protein Implicated IN Myo-Inositol Catabolique Pathway; Protein IolI; Protein Implicated In Myo-Inositol Catabolique Pathway; IolL Protein; Xylose Isomerase-Like TIM Barrel; Myo-Inositol Catabolism Protein IolI
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTIAPDRFCINRKIAPNLDLEPFFSLVKKCGLSKVELRNDMPSGKVTDNLSNDQLNALAAKYGIEIVTINALGKFNLPGD SAILLQNAEALLSQAQAIHSQALVLCPHCSADDRRSEEQKKTDTLAALKLLAPLFKQYGVQGYVEPLGFGISSLRSSLLT QSLIRDSGAPYKIVLDTFHHYLSDVTQPEFDEQIQIEGIGLVHLSGVEDARSKSALSDEERIMLSQQDRLESRKQVQNLE RLGYTGIYAFEPFSSQLDSWTEADIEREIRQSIALLQG
Sequences:
>Translated_278_residues MTIAPDRFCINRKIAPNLDLEPFFSLVKKCGLSKVELRNDMPSGKVTDNLSNDQLNALAAKYGIEIVTINALGKFNLPGD SAILLQNAEALLSQAQAIHSQALVLCPHCSADDRRSEEQKKTDTLAALKLLAPLFKQYGVQGYVEPLGFGISSLRSSLLT QSLIRDSGAPYKIVLDTFHHYLSDVTQPEFDEQIQIEGIGLVHLSGVEDARSKSALSDEERIMLSQQDRLESRKQVQNLE RLGYTGIYAFEPFSSQLDSWTEADIEREIRQSIALLQG >Mature_277_residues TIAPDRFCINRKIAPNLDLEPFFSLVKKCGLSKVELRNDMPSGKVTDNLSNDQLNALAAKYGIEIVTINALGKFNLPGDS AILLQNAEALLSQAQAIHSQALVLCPHCSADDRRSEEQKKTDTLAALKLLAPLFKQYGVQGYVEPLGFGISSLRSSLLTQ SLIRDSGAPYKIVLDTFHHYLSDVTQPEFDEQIQIEGIGLVHLSGVEDARSKSALSDEERIMLSQQDRLESRKQVQNLER LGYTGIYAFEPFSSQLDSWTEADIEREIRQSIALLQG
Specific function: Unknown
COG id: COG4130
COG function: function code G; Predicted sugar epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30851; Mature: 30720
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAPDRFCINRKIAPNLDLEPFFSLVKKCGLSKVELRNDMPSGKVTDNLSNDQLNALAA CCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHH KYGIEIVTINALGKFNLPGDSAILLQNAEALLSQAQAIHSQALVLCPHCSADDRRSEEQK HHCEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHH KTDTLAALKLLAPLFKQYGVQGYVEPLGFGISSLRSSLLTQSLIRDSGAPYKIVLDTFHH HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH YLSDVTQPEFDEQIQIEGIGLVHLSGVEDARSKSALSDEERIMLSQQDRLESRKQVQNLE HHHHCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH RLGYTGIYAFEPFSSQLDSWTEADIEREIRQSIALLQG HCCCCCEEEECCHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TIAPDRFCINRKIAPNLDLEPFFSLVKKCGLSKVELRNDMPSGKVTDNLSNDQLNALAA CCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHH KYGIEIVTINALGKFNLPGDSAILLQNAEALLSQAQAIHSQALVLCPHCSADDRRSEEQK HHCEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHH KTDTLAALKLLAPLFKQYGVQGYVEPLGFGISSLRSSLLTQSLIRDSGAPYKIVLDTFHH HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH YLSDVTQPEFDEQIQIEGIGLVHLSGVEDARSKSALSDEERIMLSQQDRLESRKQVQNLE HHHHCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH RLGYTGIYAFEPFSSQLDSWTEADIEREIRQSIALLQG HCCCCCEEEECCHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA