| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is trkA [H]
Identifier: 157372747
GI number: 157372747
Start: 5006697
End: 5008073
Strand: Direct
Name: trkA [H]
Synonym: Spro_4514
Alternate gene names: 157372747
Gene position: 5006697-5008073 (Clockwise)
Preceding gene: 157372746
Following gene: 157372748
Centisome position: 91.89
GC content: 51.78
Gene sequence:
>1377_bases ATGAAAATAATTATTCTTGGCGCGGGTCAGGTTGGCGGGACACTGGCAGAAAACCTGGTGGGTGAAAATAACGATATTAC CGTCGTGGATACCGATTCCGGCCGCCTGCGTCAGTTACAGGATAAGTTCGACCTGCGGGTCGTTCAGGGCTACGGCTCTC ATCCACGTGTACTCCGGGAAGCGGGGGCGGAAGATGCCGATATGCTGGTTGCCGTCACTAATTCGGACGAAACCAACATG ATTGCCTGTCAGATTGCCTACTCACTGTTTAATACACCTAACCGAATCGCCCGTATCCGTGCGCCAGAATATATCCGCGA GTCAGAGAAGCTGTTTCACCCTGAAGCGGTACCCATCGACCACCTGATCTCACCAGAACAGCTGGTTATCGACTACATCT ATAAATTGATTGAGTATCCGGGTGCGCTGCAGGTGGTCAACTTTGCAGAGGGCAAGGTCAGCATTGCCGCGGTAAAAGCC TACTACGGTGGGCCGTTGGTGGGTAATGCCTTGTCTTCAATGCGCGAGCATATGCCGCATATTGATACTCGCGTCGCCGC TATCTTCCGTCAGGATCGACCGATTCGTCCGCAGGGCTCCACCATTATCGAGGCTGGCGATGAAGTGTTCTTTGTAGCTG CATCACAGCATATCCGTGCGGTAATGAGTGAGTTGCAACGACTGGAAAAGCCCTATAAACGCATCATGATTGTTGGCGGT GGCAACGTCGGCGCAGGCCTGGCGCAAAGGTTGGAGAAATCTTACAACGTGAAGCTGATTGAACGTAATCAGCAACGTGC CGCAGAGCTGGCCGAACAACTGCATGACACCATCGTATTTTATGGCGATGCTTCTGACCAGGAGCTGCTGGCAGAAGAAC ATGTTGATCAGGTGGATGTTTTTATCGCCATCACCAACGATGACGAAGCAAATATCATGTCCGCCATGCTCGCCAAACGT ATGGGGGCCAAAAAGGTAATGGTGCTGATTCAGCGTCGTGCCTATGTTGATCTGGTACAAGGCAGCGTCATCGACATTGC AATTTCTCCACAACAAGCCACCATTTCAGCGCTGTTGGGCCACGTGCGGAAAGCAGATATCGTCAGCGTTTCCTCACTCC GTCGCGGCGTCGCGGAAGCCATCGAAGCCATTGCGCACGGCGACGAAAGTACTTCAAAAGTGGTCGGCCGCACCGTTGAA AATATTAAATTGCCGCCAGGTACTACTATTGGCGCCATTGTGCGCGGTGATGACGTTATTATTGCCAACGGTAACAGCAA AATCGAACAGGGCGATCACGTCATTATGTTTATAACCGATAAAAAGTTCGTTCCTGACGTTGAGCGGCTGTTCCAGCCAA GTCCTTTCTTCCTGTAG
Upstream 100 bases:
>100_bases ACGCTAAGCTGATTAAAATGTAGCTGTTCAGTACTCTGGGCGCGGCTGTTGCGCCCTTTCAGATAATCTTCAGCGGTTTC AGTGTGAAGCAGAGAAGCGA
Downstream 100 bases:
>100_bases AACAAATGTAGTAATGAATGGTCTATAATTGCGAGGTTGTTCTCTGCCATAGAAAGAGATAAAACTTTTCGCTCCTTTTG TGGCAAAGGGAAATTGCTTT
Product: potassium transporter peripheral membrane component
Products: NA
Alternate protein names: K(+)-uptake protein trkA [H]
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MKIIILGAGQVGGTLAENLVGENNDITVVDTDSGRLRQLQDKFDLRVVQGYGSHPRVLREAGAEDADMLVAVTNSDETNM IACQIAYSLFNTPNRIARIRAPEYIRESEKLFHPEAVPIDHLISPEQLVIDYIYKLIEYPGALQVVNFAEGKVSIAAVKA YYGGPLVGNALSSMREHMPHIDTRVAAIFRQDRPIRPQGSTIIEAGDEVFFVAASQHIRAVMSELQRLEKPYKRIMIVGG GNVGAGLAQRLEKSYNVKLIERNQQRAAELAEQLHDTIVFYGDASDQELLAEEHVDQVDVFIAITNDDEANIMSAMLAKR MGAKKVMVLIQRRAYVDLVQGSVIDIAISPQQATISALLGHVRKADIVSVSSLRRGVAEAIEAIAHGDESTSKVVGRTVE NIKLPPGTTIGAIVRGDDVIIANGNSKIEQGDHVIMFITDKKFVPDVERLFQPSPFFL
Sequences:
>Translated_458_residues MKIIILGAGQVGGTLAENLVGENNDITVVDTDSGRLRQLQDKFDLRVVQGYGSHPRVLREAGAEDADMLVAVTNSDETNM IACQIAYSLFNTPNRIARIRAPEYIRESEKLFHPEAVPIDHLISPEQLVIDYIYKLIEYPGALQVVNFAEGKVSIAAVKA YYGGPLVGNALSSMREHMPHIDTRVAAIFRQDRPIRPQGSTIIEAGDEVFFVAASQHIRAVMSELQRLEKPYKRIMIVGG GNVGAGLAQRLEKSYNVKLIERNQQRAAELAEQLHDTIVFYGDASDQELLAEEHVDQVDVFIAITNDDEANIMSAMLAKR MGAKKVMVLIQRRAYVDLVQGSVIDIAISPQQATISALLGHVRKADIVSVSSLRRGVAEAIEAIAHGDESTSKVVGRTVE NIKLPPGTTIGAIVRGDDVIIANGNSKIEQGDHVIMFITDKKFVPDVERLFQPSPFFL >Mature_458_residues MKIIILGAGQVGGTLAENLVGENNDITVVDTDSGRLRQLQDKFDLRVVQGYGSHPRVLREAGAEDADMLVAVTNSDETNM IACQIAYSLFNTPNRIARIRAPEYIRESEKLFHPEAVPIDHLISPEQLVIDYIYKLIEYPGALQVVNFAEGKVSIAAVKA YYGGPLVGNALSSMREHMPHIDTRVAAIFRQDRPIRPQGSTIIEAGDEVFFVAASQHIRAVMSELQRLEKPYKRIMIVGG GNVGAGLAQRLEKSYNVKLIERNQQRAAELAEQLHDTIVFYGDASDQELLAEEHVDQVDVFIAITNDDEANIMSAMLAKR MGAKKVMVLIQRRAYVDLVQGSVIDIAISPQQATISALLGHVRKADIVSVSSLRRGVAEAIEAIAHGDESTSKVVGRTVE NIKLPPGTTIGAIVRGDDVIIANGNSKIEQGDHVIMFITDKKFVPDVERLFQPSPFFL
Specific function: Part of the constitutive potassium transport systems trkG and trkH. May regulate the transport activity of trkG and trkH systems. Binds to NAD+ and NADH [H]
COG id: COG0569
COG function: function code P; K+ transport systems, NAD-binding component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Note=Peripherally bound to the inner side of the inner membrane via the trkG and trkH proteins (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 RCK N-terminal domains [H]
Homologues:
Organism=Escherichia coli, GI1789685, Length=458, Percent_Identity=87.5545851528384, Blast_Score=840, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006036 - InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 50298; Mature: 50298
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIILGAGQVGGTLAENLVGENNDITVVDTDSGRLRQLQDKFDLRVVQGYGSHPRVLRE CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCEEEEECCCCCCHHHHH AGAEDADMLVAVTNSDETNMIACQIAYSLFNTPNRIARIRAPEYIRESEKLFHPEAVPID CCCCCCCEEEEEECCCCCCEEEHEEHHHHHCCCCHHEEECCHHHHHHHHHHCCCCCCCHH HLISPEQLVIDYIYKLIEYPGALQVVNFAEGKVSIAAVKAYYGGPLVGNALSSMREHMPH HCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEHHCCCHHHHHHHHHHHHCCC IDTRVAAIFRQDRPIRPQGSTIIEAGDEVFFVAASQHIRAVMSELQRLEKPYKRIMIVGG HHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHCHHHEEEEEEC GNVGAGLAQRLEKSYNVKLIERNQQRAAELAEQLHDTIVFYGDASDQELLAEEHVDQVDV CCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCEEEEEECCCCHHHHHHHCCCEEEE FIAITNDDEANIMSAMLAKRMGAKKVMVLIQRRAYVDLVQGSVIDIAISPQQATISALLG EEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH HVRKADIVSVSSLRRGVAEAIEAIAHGDESTSKVVGRTVENIKLPPGTTIGAIVRGDDVI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCEEE IANGNSKIEQGDHVIMFITDKKFVPDVERLFQPSPFFL EECCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCC >Mature Secondary Structure MKIIILGAGQVGGTLAENLVGENNDITVVDTDSGRLRQLQDKFDLRVVQGYGSHPRVLRE CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCEEEEECCCCCCHHHHH AGAEDADMLVAVTNSDETNMIACQIAYSLFNTPNRIARIRAPEYIRESEKLFHPEAVPID CCCCCCCEEEEEECCCCCCEEEHEEHHHHHCCCCHHEEECCHHHHHHHHHHCCCCCCCHH HLISPEQLVIDYIYKLIEYPGALQVVNFAEGKVSIAAVKAYYGGPLVGNALSSMREHMPH HCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEHHCCCHHHHHHHHHHHHCCC IDTRVAAIFRQDRPIRPQGSTIIEAGDEVFFVAASQHIRAVMSELQRLEKPYKRIMIVGG HHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHCHHHEEEEEEC GNVGAGLAQRLEKSYNVKLIERNQQRAAELAEQLHDTIVFYGDASDQELLAEEHVDQVDV CCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCEEEEEECCCCHHHHHHHCCCEEEE FIAITNDDEANIMSAMLAKRMGAKKVMVLIQRRAYVDLVQGSVIDIAISPQQATISALLG EEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH HVRKADIVSVSSLRRGVAEAIEAIAHGDESTSKVVGRTVENIKLPPGTTIGAIVRGDDVI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCEEE IANGNSKIEQGDHVIMFITDKKFVPDVERLFQPSPFFL EECCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]