| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372725
Identifier: 157372725
GI number: 157372725
Start: 4977787
End: 4978683
Strand: Direct
Name: 157372725
Synonym: Spro_4492
Alternate gene names: NA
Gene position: 4977787-4978683 (Clockwise)
Preceding gene: 157372724
Following gene: 157372726
Centisome position: 91.35
GC content: 46.49
Gene sequence:
>897_bases ATGAAACGCGCAAAAAAAAGCAGTCATGGCGACTATACAGATTTTCTTACCGCAATCAGAACCTTTGAATGCTCTATCGA TCCTCTTGATGCAGACTATTACGACCAGCATTACGATGATCAACAGGCAGTTACCTACCAACAGGTTGAATCTCCCGGGC GTGTTATCCGCAGCAAGAGTGGCGCGCCATTGGTCAGCACTACCTCGATAAAAGATTATTTTATAAAACTGGGCGTTGAT AAATTCTATATCCGGGGCTCTGGTGATCCCGCAATGTTTCGGACAATGCAATATGCCGTTATGAATTATCTGGGCTTTGT GGGTTACCAGTTCAGCGAACACGACCTCTGGGATCTCGGCTATTATACCCATTATGATAGCAATGGTTTGCCGATGTATT ATTCGGATGTAGACGTCAGCAATTGGGCCAATGGCGTTCGTGATAAAATAATGGAATTTCCCGAAGGGAAGATCCACGTT ACCGATGTTAATACCTGGCGAGGAACATTTACCGGTAAACATGGTATTAACTCTTTCGAGGATGTCATCAATCCAGACAA GCAGGAATTTATCGCCCTCGACCATTTTGACAATAAATACCAAAACATAGTCTTACAGTTAGCCGAACACGGGGAAAAAC TGAGTAATTATCTGGGGAAAACGGTTCGCTGGAGCGAGTGCCAGCCGGTGTTAACGCCTCCGGATGGCCGCCCCAATGAC GTGGAGATCACTTTATCAGGCTTACTGGCAGGGGCACATCTGCGCGGGGCAGAAGGCGTCGTCGCCCTCCTGATAAATCA CGAAAATCATGCGGATGAAAACGGAACGGCTATCTTGCAATATGTTTATGATTTCGGTGGCTACAGCACACCTTATGCAG GATCAGCAGCCGATTAA
Upstream 100 bases:
>100_bases CATCAATATAAATACCCATTAAGAGGTATAAGCTAACCGCGTGATTTTTTCTTCCAAAATTATCTCCCCTCTTGTGGGAA TATCGCTAAGGAATATAAAA
Downstream 100 bases:
>100_bases AATTTAGCGGCGCCGACTGTGGCGCCTCACTATATTTGTGATCCTGTTCAAGTAATAGTCATCTGCCCGTTGTTGTCCCA AATAGGCTCACTTACCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKRAKKSSHGDYTDFLTAIRTFECSIDPLDADYYDQHYDDQQAVTYQQVESPGRVIRSKSGAPLVSTTSIKDYFIKLGVD KFYIRGSGDPAMFRTMQYAVMNYLGFVGYQFSEHDLWDLGYYTHYDSNGLPMYYSDVDVSNWANGVRDKIMEFPEGKIHV TDVNTWRGTFTGKHGINSFEDVINPDKQEFIALDHFDNKYQNIVLQLAEHGEKLSNYLGKTVRWSECQPVLTPPDGRPND VEITLSGLLAGAHLRGAEGVVALLINHENHADENGTAILQYVYDFGGYSTPYAGSAAD
Sequences:
>Translated_298_residues MKRAKKSSHGDYTDFLTAIRTFECSIDPLDADYYDQHYDDQQAVTYQQVESPGRVIRSKSGAPLVSTTSIKDYFIKLGVD KFYIRGSGDPAMFRTMQYAVMNYLGFVGYQFSEHDLWDLGYYTHYDSNGLPMYYSDVDVSNWANGVRDKIMEFPEGKIHV TDVNTWRGTFTGKHGINSFEDVINPDKQEFIALDHFDNKYQNIVLQLAEHGEKLSNYLGKTVRWSECQPVLTPPDGRPND VEITLSGLLAGAHLRGAEGVVALLINHENHADENGTAILQYVYDFGGYSTPYAGSAAD >Mature_298_residues MKRAKKSSHGDYTDFLTAIRTFECSIDPLDADYYDQHYDDQQAVTYQQVESPGRVIRSKSGAPLVSTTSIKDYFIKLGVD KFYIRGSGDPAMFRTMQYAVMNYLGFVGYQFSEHDLWDLGYYTHYDSNGLPMYYSDVDVSNWANGVRDKIMEFPEGKIHV TDVNTWRGTFTGKHGINSFEDVINPDKQEFIALDHFDNKYQNIVLQLAEHGEKLSNYLGKTVRWSECQPVLTPPDGRPND VEITLSGLLAGAHLRGAEGVVALLINHENHADENGTAILQYVYDFGGYSTPYAGSAAD
Specific function: Unknown
COG id: COG1652
COG function: function code S; Uncharacterized protein containing LysM domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33597; Mature: 33597
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAKKSSHGDYTDFLTAIRTFECSIDPLDADYYDQHYDDQQAVTYQQVESPGRVIRSKS CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCHHHHCCCC GAPLVSTTSIKDYFIKLGVDKFYIRGSGDPAMFRTMQYAVMNYLGFVGYQFSEHDLWDLG CCCEEEECHHHHHHEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECC YYTHYDSNGLPMYYSDVDVSNWANGVRDKIMEFPEGKIHVTDVNTWRGTFTGKHGINSFE CEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHH DVINPDKQEFIALDHFDNKYQNIVLQLAEHGEKLSNYLGKTVRWSECQPVLTPPDGRPND HHCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE VEITLSGLLAGAHLRGAEGVVALLINHENHADENGTAILQYVYDFGGYSTPYAGSAAD EEEEEEHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHEEHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKRAKKSSHGDYTDFLTAIRTFECSIDPLDADYYDQHYDDQQAVTYQQVESPGRVIRSKS CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCHHHHCCCC GAPLVSTTSIKDYFIKLGVDKFYIRGSGDPAMFRTMQYAVMNYLGFVGYQFSEHDLWDLG CCCEEEECHHHHHHEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECC YYTHYDSNGLPMYYSDVDVSNWANGVRDKIMEFPEGKIHVTDVNTWRGTFTGKHGINSFE CEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHH DVINPDKQEFIALDHFDNKYQNIVLQLAEHGEKLSNYLGKTVRWSECQPVLTPPDGRPND HHCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE VEITLSGLLAGAHLRGAEGVVALLINHENHADENGTAILQYVYDFGGYSTPYAGSAAD EEEEEEHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHEEHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA