| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yjgI [H]
Identifier: 157372670
GI number: 157372670
Start: 4909048
End: 4909797
Strand: Direct
Name: yjgI [H]
Synonym: Spro_4437
Alternate gene names: 157372670
Gene position: 4909048-4909797 (Clockwise)
Preceding gene: 157372668
Following gene: 157372671
Centisome position: 90.09
GC content: 60.13
Gene sequence:
>750_bases ATGTCCGCAACTCTCTCTCTGCAAGGCAAAGTCGCATTCATTCAGGGCGGTTCACGCGGCATCGGTGCCGCCATCGCCAA ACGCCTGGCGCGCGAAGGTGCCGCTGTGGCATTAACCTACGTCGCCTCTGCCGACAAAGCCGATGCGGTGGTGAGTGAAA TCACTGCTGCCGGCGGCAAGGCGCTGGCGATCAAGGCCGACAGTGCTGATGCAACAGCGCTGCAACAGGCGGTGCGCCAG GCAGTAAACAGCCTGGGCAATCTGGATATTTTGGTGAACAACGCCGGTGTGCTGGCGATGGGCAGCACCGAAGAACTGCC GCTGGAAGATCTGGACCGCACGCTGGCGGTGAACGTCCGCAGCGTATTTGTCGCCAGTCAGGAAGCCGCGCGTCATATGA ATGATGGCGGTCGCATCATCAATATTGGCAGCACCAACGCCGAACGTATGCCATTTGCCGGCGGCGCGGTATATGCGATG AGTAAATCTGCGCTGGTCGGCCTGACCAAAGGCATGGCACGCGATCTCGGCCCACGCGGCATTACCGTCAACAACGTGCA GCCCGGCCCGGTAGATACCGATATGAACCCGGACAACAGCGATTTCGCCGAGCAGTTGAAAGGGATGATGGCGATCGGTC GTTACGGCAAGGACGAAGAGATCGCCAGCTTCGTCGCTTATCTGGTTGGCCCCGAGGCGGGATATATCACCGGTGCCAGC CTGAGCATCGACGGCGGCTTCTCGGCTTAA
Upstream 100 bases:
>100_bases TTTAAGCTGATTATAGCTCTTTGTGGCTAGTTACCGATCCGCGTTTCTCCGATACTGAACCGGTAGCTTTATTAACCTAA TCCCACTCTGGAGAAACATC
Downstream 100 bases:
>100_bases TGTTCCCAGAAAAACAAAAAGCCCCTCTCGGGTAATGCCGTTCAGTTAAGTACAGTTCTGAATAAGGATGTACGACGTTG TTTAAGTGGGCGTCCCCCTC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSATLSLQGKVAFIQGGSRGIGAAIAKRLAREGAAVALTYVASADKADAVVSEITAAGGKALAIKADSADATALQQAVRQ AVNSLGNLDILVNNAGVLAMGSTEELPLEDLDRTLAVNVRSVFVASQEAARHMNDGGRIINIGSTNAERMPFAGGAVYAM SKSALVGLTKGMARDLGPRGITVNNVQPGPVDTDMNPDNSDFAEQLKGMMAIGRYGKDEEIASFVAYLVGPEAGYITGAS LSIDGGFSA
Sequences:
>Translated_249_residues MSATLSLQGKVAFIQGGSRGIGAAIAKRLAREGAAVALTYVASADKADAVVSEITAAGGKALAIKADSADATALQQAVRQ AVNSLGNLDILVNNAGVLAMGSTEELPLEDLDRTLAVNVRSVFVASQEAARHMNDGGRIINIGSTNAERMPFAGGAVYAM SKSALVGLTKGMARDLGPRGITVNNVQPGPVDTDMNPDNSDFAEQLKGMMAIGRYGKDEEIASFVAYLVGPEAGYITGAS LSIDGGFSA >Mature_248_residues SATLSLQGKVAFIQGGSRGIGAAIAKRLAREGAAVALTYVASADKADAVVSEITAAGGKALAIKADSADATALQQAVRQA VNSLGNLDILVNNAGVLAMGSTEELPLEDLDRTLAVNVRSVFVASQEAARHMNDGGRIINIGSTNAERMPFAGGAVYAMS KSALVGLTKGMARDLGPRGITVNNVQPGPVDTDMNPDNSDFAEQLKGMMAIGRYGKDEEIASFVAYLVGPEAGYITGASL SIDGGFSA
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=34.8547717842324, Blast_Score=117, Evalue=7e-27, Organism=Homo sapiens, GI5031737, Length=244, Percent_Identity=33.1967213114754, Blast_Score=115, Evalue=3e-26, Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=34.6774193548387, Blast_Score=112, Evalue=2e-25, Organism=Homo sapiens, GI7705925, Length=251, Percent_Identity=31.8725099601594, Blast_Score=104, Evalue=6e-23, Organism=Homo sapiens, GI66933014, Length=255, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI15277342, Length=252, Percent_Identity=31.7460317460317, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=35.4166666666667, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI31542939, Length=198, Percent_Identity=35.3535353535354, Blast_Score=91, Evalue=9e-19, Organism=Homo sapiens, GI19923817, Length=255, Percent_Identity=27.0588235294118, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI10190704, Length=261, Percent_Identity=32.183908045977, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI40254986, Length=192, Percent_Identity=31.7708333333333, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=28.968253968254, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI224922801, Length=184, Percent_Identity=34.7826086956522, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI4758504, Length=264, Percent_Identity=31.8181818181818, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI4503301, Length=253, Percent_Identity=28.4584980237154, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI4504505, Length=198, Percent_Identity=32.3232323232323, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI126723191, Length=186, Percent_Identity=33.8709677419355, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI4503817, Length=196, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI83715985, Length=260, Percent_Identity=31.1538461538462, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI166795268, Length=228, Percent_Identity=26.7543859649123, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI209862901, Length=197, Percent_Identity=27.9187817258883, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI19923983, Length=197, Percent_Identity=27.9187817258883, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI109715829, Length=252, Percent_Identity=27.3809523809524, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI59889578, Length=224, Percent_Identity=27.2321428571429, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=50.4098360655738, Blast_Score=228, Evalue=3e-61, Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=38.3064516129032, Blast_Score=137, Evalue=6e-34, Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=35.5371900826446, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=36.6935483870968, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=31.4741035856574, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1789208, Length=255, Percent_Identity=31.7647058823529, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=30.2788844621514, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787905, Length=253, Percent_Identity=36.3636363636364, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1789378, Length=245, Percent_Identity=32.2448979591837, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI87082160, Length=255, Percent_Identity=30.1960784313725, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=30.5882352941176, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=32.03125, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1787820, Length=185, Percent_Identity=27.5675675675676, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787545, Length=252, Percent_Identity=26.5873015873016, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115534694, Length=255, Percent_Identity=34.1176470588235, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI25147288, Length=248, Percent_Identity=33.4677419354839, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=34.0996168582375, Blast_Score=113, Evalue=8e-26, Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=33.5849056603774, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=32.5396825396825, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17560676, Length=257, Percent_Identity=33.4630350194552, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=32.5301204819277, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17562910, Length=258, Percent_Identity=32.1705426356589, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17560150, Length=257, Percent_Identity=32.6848249027237, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=32.9365079365079, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17562990, Length=257, Percent_Identity=31.9066147859922, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=32.9501915708812, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=33.4600760456274, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=28.6792452830189, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17559104, Length=258, Percent_Identity=32.5581395348837, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560332, Length=259, Percent_Identity=32.046332046332, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI71982365, Length=197, Percent_Identity=31.4720812182741, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17555706, Length=251, Percent_Identity=32.2709163346614, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=32.183908045977, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=30.1526717557252, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=31.1787072243346, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=30.6513409961686, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17568967, Length=195, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17563726, Length=258, Percent_Identity=29.8449612403101, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17551412, Length=259, Percent_Identity=30.8880308880309, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17538486, Length=259, Percent_Identity=31.2741312741313, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71997099, Length=236, Percent_Identity=30.5084745762712, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17558628, Length=189, Percent_Identity=31.7460317460317, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17538182, Length=267, Percent_Identity=30.3370786516854, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=28.4615384615385, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=28.0632411067194, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17564282, Length=195, Percent_Identity=27.6923076923077, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17508651, Length=256, Percent_Identity=28.515625, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=27.6679841897233, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17508895, Length=251, Percent_Identity=27.8884462151394, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17561272, Length=253, Percent_Identity=28.0632411067194, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17555612, Length=210, Percent_Identity=30, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=198, Percent_Identity=30.3030303030303, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324126, Length=248, Percent_Identity=23.7903225806452, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=37.0517928286853, Blast_Score=137, Evalue=7e-33, Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=36.2204724409449, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=35.1778656126482, Blast_Score=130, Evalue=6e-31, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=33.7254901960784, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI24643142, Length=245, Percent_Identity=35.1020408163265, Blast_Score=124, Evalue=4e-29, Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=34.136546184739, Blast_Score=120, Evalue=6e-28, Organism=Drosophila melanogaster, GI24639444, Length=249, Percent_Identity=31.7269076305221, Blast_Score=114, Evalue=8e-26, Organism=Drosophila melanogaster, GI24644337, Length=258, Percent_Identity=30.6201550387597, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI21357673, Length=201, Percent_Identity=30.8457711442786, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24641232, Length=234, Percent_Identity=30.7692307692308, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI17737361, Length=263, Percent_Identity=29.6577946768061, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI21355631, Length=172, Percent_Identity=30.2325581395349, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI116007236, Length=201, Percent_Identity=30.3482587064677, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI161076933, Length=195, Percent_Identity=31.2820512820513, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24584748, Length=195, Percent_Identity=31.2820512820513, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24584752, Length=193, Percent_Identity=32.6424870466321, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007234, Length=238, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221331218, Length=210, Percent_Identity=28.0952380952381, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24665243, Length=210, Percent_Identity=28.0952380952381, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24648944, Length=203, Percent_Identity=27.0935960591133, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI18859837, Length=194, Percent_Identity=30.4123711340206, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 25433; Mature: 25302
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATLSLQGKVAFIQGGSRGIGAAIAKRLAREGAAVALTYVASADKADAVVSEITAAGGK CCCEEEECCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCC ALAIKADSADATALQQAVRQAVNSLGNLDILVNNAGVLAMGSTEELPLEDLDRTLAVNVR EEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCHHHHHHHHEEEHH SVFVASQEAARHMNDGGRIINIGSTNAERMPFAGGAVYAMSKSALVGLTKGMARDLGPRG HHEEECHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCC ITVNNVQPGPVDTDMNPDNSDFAEQLKGMMAIGRYGKDEEIASFVAYLVGPEAGYITGAS EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCE LSIDGGFSA EEECCCCCC >Mature Secondary Structure SATLSLQGKVAFIQGGSRGIGAAIAKRLAREGAAVALTYVASADKADAVVSEITAAGGK CCEEEECCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCC ALAIKADSADATALQQAVRQAVNSLGNLDILVNNAGVLAMGSTEELPLEDLDRTLAVNVR EEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCHHHHHHHHEEEHH SVFVASQEAARHMNDGGRIINIGSTNAERMPFAGGAVYAMSKSALVGLTKGMARDLGPRG HHEEECHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCC ITVNNVQPGPVDTDMNPDNSDFAEQLKGMMAIGRYGKDEEIASFVAYLVGPEAGYITGAS EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCE LSIDGGFSA EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]