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The map label for this gene is licR [H]

Identifier: 157372605

GI number: 157372605

Start: 4839722

End: 4841638

Strand: Reverse

Name: licR [H]

Synonym: Spro_4372

Alternate gene names: 157372605

Gene position: 4841638-4839722 (Counterclockwise)

Preceding gene: 157372606

Following gene: 157372593

Centisome position: 88.86

GC content: 54.77

Gene sequence:

>1917_bases
ATGGTGCGATTTCCCTACCCGCGTTTGGCCTATCTGTTTGATGCTTTGCAGTCAGAGACTTTGCCGCAGGAAGAGCTGGC
GAAGCGCTTCGCTGTTTCCACCCGAACCGTGCGTGCCGACATCACCGCGCTGAACGATATTCTGGAAAACTACGGTGCCC
ACTTCGTGCATAGCCGTGGGGCGGGTTATCGCCTGCAGGTCGATGACGCCGTACTGTTTAGCGCCATGCAACATCAGGAA
CGTAAAAAACACGCCACGCCACGCAGCGCGCAGGAACGGGTGCACTATTTGCTGATTCGTTTTCTGACCTCAGCCTTTTC
TCTGAAACTTGAAGATTTAGCCGATGAATGGTTTGTCAGCCGTGGCACGCTGCAAAACGACATGGCTGAGGTAAGAGAGC
GTCTGGCGCACTACCAATTGACCATTGAAACCAAACCGCGCTACGGCATGAAGCTGTTTGGTTCGGAGATGGCGATCCGC
GCCTGTCTGACCGATCTGTTATTCCAACTGCACCTGGCCGATGCCGAAAATCCGCTGCTCAACAATGAGATCCTGCGTCA
ACCGCAGGTGACGACCTTTGCCGGTTTGCTGCATCCGTTGCTGTCGCAATATGCCATTCGTTTGACAGACGAAGGTGAGC
AGTATCTGATTTTCTATTGTGCAGTGGCGCTGCAACGCATTACCGATGGTTATCCGCTGCCGGACTTTGACGTTGAGGAC
GGGGATGACGCGGTGCGCAAGGTTTCGACCTGGCTGGCCGGGGAACTGCGTAAAGCCAGTGGCAAAGAGATATCGATAGC
GGAAGAGGCCTACCTGCGGGTGAACATTGCTGCGCGGCGGGTGCAGGAGGTGCAACCTACCGAGATCAACGCCGACGATG
AAGAAGCGCTGGTGGATTACATTCTGTCGTATATCAACGCGCACTATAACTACAATCTGCAGGGTGACAAGCAGCTGCGT
GCCGATCTGCTGACCCATATCAAGACCATGATCACCCGGGTGAAATACCAGATTAATATCCCCAACCCGCTGCTGGCGAA
CATTAAACAGCACTACCCAATGGCCTATGACGTGACGCTGGCCGCGGTCTCCAGCTGGGGGAAATATACGCCCTACACCC
TGAGTGAAAACGAGATCGGTTATCTGGTACTGCACATTGGCGTTGGGCTGGAGCGGCATTACAACATCGGCTATGAGCGA
CACCCGCAGGTGATGCTGGTGTGCGATACCGGTAACTCGACGGTGCGGATGATCCAGGCGCAGATCGCACGCAAATATCC
ACAACTGGTGATGACGCGCATCGTTTCACTGCGAGATTACGAGGTGCTCAGCCATATCGACGAAGACTTCGTTATTTCCA
ATGCGCGGGTTAGCGAAAAGAACAAGCCGGTGGTGGTGATGTCGCCGTTCCCGACCGAATACCAGCTCGAACAGCTCGGC
AAACTGGTGCTGGTGGATCGTACCAAGCCCTATATGCTGGAGAAGTTCTTCGACGCCGAGCATTTTATGTTGGTCAATGA
ACCGCTGACCCAGGCGGAATTATTCCAGCAGGTGTGCCGCCAGCTTGAGCAAGAAGGCTATGTTGGCGAAGATTTTTACC
CTTCAGTGGTCGAGCGCGAGGCGATTGTTTCTACCCTGCTGGGTGAAGGGATTGCGCTGCCGCACTCGCTGGGGTTGCTG
GCGAAAAAAACCGTCGTGGTGACGCTGCTGGCGCCACAGGGGGTGGCCTGGGGTGAAGGTGAAATTGCCCACGTGATTTT
CCTGCTGGCGATCAGCAAGAGCGATTACGAAGAGGCGATGGCAATCTACGATCTGTTCGTCACCTTTGTGCGCGAACGTT
CGATGAGTCGCCTGTTGGGCAGTGATAATTTCGACAGTTTCAAGGCGGTGGCGCTGGACTGTTTAAGTAGGATCTAG

Upstream 100 bases:

>100_bases
GCCGGTGGGCAGCCCCTCGCAAATGGTGTTCTTGCCGGTGGCGAAGTAACCCGTTGCCCGCCTGATTCCCCAGGCGGGCA
CCTTAATTGACGGAAAGAGA

Downstream 100 bases:

>100_bases
CTGCAGGAATGATGTGTTGTAAAGTAGGTGCGCTGCATGTAGCGCACCTGACTCTTTAGTCTTCGTCAAAACCGGAATTG
ATCAACTCAATTACCGCCGC

Product: transcriptional antiterminator, BglG

Products: NA

Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]

Number of amino acids: Translated: 638; Mature: 638

Protein sequence:

>638_residues
MVRFPYPRLAYLFDALQSETLPQEELAKRFAVSTRTVRADITALNDILENYGAHFVHSRGAGYRLQVDDAVLFSAMQHQE
RKKHATPRSAQERVHYLLIRFLTSAFSLKLEDLADEWFVSRGTLQNDMAEVRERLAHYQLTIETKPRYGMKLFGSEMAIR
ACLTDLLFQLHLADAENPLLNNEILRQPQVTTFAGLLHPLLSQYAIRLTDEGEQYLIFYCAVALQRITDGYPLPDFDVED
GDDAVRKVSTWLAGELRKASGKEISIAEEAYLRVNIAARRVQEVQPTEINADDEEALVDYILSYINAHYNYNLQGDKQLR
ADLLTHIKTMITRVKYQINIPNPLLANIKQHYPMAYDVTLAAVSSWGKYTPYTLSENEIGYLVLHIGVGLERHYNIGYER
HPQVMLVCDTGNSTVRMIQAQIARKYPQLVMTRIVSLRDYEVLSHIDEDFVISNARVSEKNKPVVVMSPFPTEYQLEQLG
KLVLVDRTKPYMLEKFFDAEHFMLVNEPLTQAELFQQVCRQLEQEGYVGEDFYPSVVEREAIVSTLLGEGIALPHSLGLL
AKKTVVVTLLAPQGVAWGEGEIAHVIFLLAISKSDYEEAMAIYDLFVTFVRERSMSRLLGSDNFDSFKAVALDCLSRI

Sequences:

>Translated_638_residues
MVRFPYPRLAYLFDALQSETLPQEELAKRFAVSTRTVRADITALNDILENYGAHFVHSRGAGYRLQVDDAVLFSAMQHQE
RKKHATPRSAQERVHYLLIRFLTSAFSLKLEDLADEWFVSRGTLQNDMAEVRERLAHYQLTIETKPRYGMKLFGSEMAIR
ACLTDLLFQLHLADAENPLLNNEILRQPQVTTFAGLLHPLLSQYAIRLTDEGEQYLIFYCAVALQRITDGYPLPDFDVED
GDDAVRKVSTWLAGELRKASGKEISIAEEAYLRVNIAARRVQEVQPTEINADDEEALVDYILSYINAHYNYNLQGDKQLR
ADLLTHIKTMITRVKYQINIPNPLLANIKQHYPMAYDVTLAAVSSWGKYTPYTLSENEIGYLVLHIGVGLERHYNIGYER
HPQVMLVCDTGNSTVRMIQAQIARKYPQLVMTRIVSLRDYEVLSHIDEDFVISNARVSEKNKPVVVMSPFPTEYQLEQLG
KLVLVDRTKPYMLEKFFDAEHFMLVNEPLTQAELFQQVCRQLEQEGYVGEDFYPSVVEREAIVSTLLGEGIALPHSLGLL
AKKTVVVTLLAPQGVAWGEGEIAHVIFLLAISKSDYEEAMAIYDLFVTFVRERSMSRLLGSDNFDSFKAVALDCLSRI
>Mature_638_residues
MVRFPYPRLAYLFDALQSETLPQEELAKRFAVSTRTVRADITALNDILENYGAHFVHSRGAGYRLQVDDAVLFSAMQHQE
RKKHATPRSAQERVHYLLIRFLTSAFSLKLEDLADEWFVSRGTLQNDMAEVRERLAHYQLTIETKPRYGMKLFGSEMAIR
ACLTDLLFQLHLADAENPLLNNEILRQPQVTTFAGLLHPLLSQYAIRLTDEGEQYLIFYCAVALQRITDGYPLPDFDVED
GDDAVRKVSTWLAGELRKASGKEISIAEEAYLRVNIAARRVQEVQPTEINADDEEALVDYILSYINAHYNYNLQGDKQLR
ADLLTHIKTMITRVKYQINIPNPLLANIKQHYPMAYDVTLAAVSSWGKYTPYTLSENEIGYLVLHIGVGLERHYNIGYER
HPQVMLVCDTGNSTVRMIQAQIARKYPQLVMTRIVSLRDYEVLSHIDEDFVISNARVSEKNKPVVVMSPFPTEYQLEQLG
KLVLVDRTKPYMLEKFFDAEHFMLVNEPLTQAELFQQVCRQLEQEGYVGEDFYPSVVEREAIVSTLLGEGIALPHSLGLL
AKKTVVVTLLAPQGVAWGEGEIAHVIFLLAISKSDYEEAMAIYDLFVTFVRERSMSRLLGSDNFDSFKAVALDCLSRI

Specific function: Positive regulator of the licABCH operon [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR007737
- InterPro:   IPR011608
- InterPro:   IPR016152
- InterPro:   IPR002178
- InterPro:   IPR013011
- InterPro:   IPR003501
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 72749; Mature: 72749

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00894 HTH_DEOR_1 ; PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRFPYPRLAYLFDALQSETLPQEELAKRFAVSTRTVRADITALNDILENYGAHFVHSRG
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
AGYRLQVDDAVLFSAMQHQERKKHATPRSAQERVHYLLIRFLTSAFSLKLEDLADEWFVS
CCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGTLQNDMAEVRERLAHYQLTIETKPRYGMKLFGSEMAIRACLTDLLFQLHLADAENPLL
CCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NNEILRQPQVTTFAGLLHPLLSQYAIRLTDEGEQYLIFYCAVALQRITDGYPLPDFDVED
CHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
GDDAVRKVSTWLAGELRKASGKEISIAEEAYLRVNIAARRVQEVQPTEINADDEEALVDY
CHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHEEEHHHHHHHHHCCCCCCCCCHHHHHHHH
ILSYINAHYNYNLQGDKQLRADLLTHIKTMITRVKYQINIPNPLLANIKQHYPMAYDVTL
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCEEHHHH
AAVSSWGKYTPYTLSENEIGYLVLHIGVGLERHYNIGYERHPQVMLVCDTGNSTVRMIQA
HHHHCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH
QIARKYPQLVMTRIVSLRDYEVLSHIDEDFVISNARVSEKNKPVVVMSPFPTEYQLEQLG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEECCCCCCEEEECCCCCHHHHHHCC
KLVLVDRTKPYMLEKFFDAEHFMLVNEPLTQAELFQQVCRQLEQEGYVGEDFYPSVVERE
CEEEEECCCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
AIVSTLLGEGIALPHSLGLLAKKTVVVTLLAPQGVAWGEGEIAHVIFLLAISKSDYEEAM
HHHHHHHHCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHH
AIYDLFVTFVRERSMSRLLGSDNFDSFKAVALDCLSRI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MVRFPYPRLAYLFDALQSETLPQEELAKRFAVSTRTVRADITALNDILENYGAHFVHSRG
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
AGYRLQVDDAVLFSAMQHQERKKHATPRSAQERVHYLLIRFLTSAFSLKLEDLADEWFVS
CCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGTLQNDMAEVRERLAHYQLTIETKPRYGMKLFGSEMAIRACLTDLLFQLHLADAENPLL
CCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NNEILRQPQVTTFAGLLHPLLSQYAIRLTDEGEQYLIFYCAVALQRITDGYPLPDFDVED
CHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
GDDAVRKVSTWLAGELRKASGKEISIAEEAYLRVNIAARRVQEVQPTEINADDEEALVDY
CHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHEEEHHHHHHHHHCCCCCCCCCHHHHHHHH
ILSYINAHYNYNLQGDKQLRADLLTHIKTMITRVKYQINIPNPLLANIKQHYPMAYDVTL
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCEEHHHH
AAVSSWGKYTPYTLSENEIGYLVLHIGVGLERHYNIGYERHPQVMLVCDTGNSTVRMIQA
HHHHCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH
QIARKYPQLVMTRIVSLRDYEVLSHIDEDFVISNARVSEKNKPVVVMSPFPTEYQLEQLG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEECCCCCCEEEECCCCCHHHHHHCC
KLVLVDRTKPYMLEKFFDAEHFMLVNEPLTQAELFQQVCRQLEQEGYVGEDFYPSVVERE
CEEEEECCCHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
AIVSTLLGEGIALPHSLGLLAKKTVVVTLLAPQGVAWGEGEIAHVIFLLAISKSDYEEAM
HHHHHHHHCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHH
AIYDLFVTFVRERSMSRLLGSDNFDSFKAVALDCLSRI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377; 10438772 [H]