Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is yhbJ [C]

Identifier: 157372603

GI number: 157372603

Start: 4838543

End: 4839397

Strand: Direct

Name: yhbJ [C]

Synonym: Spro_4370

Alternate gene names: 157372603

Gene position: 4838543-4839397 (Clockwise)

Preceding gene: 157372602

Following gene: 157372604

Centisome position: 88.8

GC content: 56.37

Gene sequence:

>855_bases
ATGGTGCTGATGATTGTCAGCGGCCGTTCCGGTTCAGGGAAATCCGTCGCCTTACGGGCGCTGGAAGACATGGGTTTTTA
CTGCGTTGATAACCTGCCCGTGGTACTGCTGCCGCAGCTTGCCAATACGCTGGCGGAACGCAATAGCTCCGCTGCGGTAA
GCATCGACGTACGTAACATGCCGGAATCGCCGGAAGTGTTTGAATATGCGATGACTCAACTGCCGGACAGTTTTTCGCCG
CAGTTGCTGTTCCTCGATGCCGATCGTAATACGCTGATTCGCCGCTACAGTGATACTCGCCGTCTGCACCCGCTATCGAG
CAAGAACCTGTCGCTGGAAAGCGCCATCGATGAAGAGAGCGACCTGCTTGAGCCACTGCGCTCCAGGGCCGATCTGATCA
TCGATACCTCAGAAATGTCAGTGCATGAACTGGCCGAAATGCTGCGTACCCGCCTGTTGGGCAAACGCGAGCGCGAACTG
ACCATGGTGTTCGAATCCTTTGGTTTCAAGCACGGTATTCCAATCGACGCCGATTACGTGTTCGACGTGCGCTTCCTGCC
TAACCCGCACTGGGATCCGAAACTGCGCCCGATGACCGGTCTGGATAAACCCGTCGCCTCATTCCTCGATCGCCACACCG
AAGTGCACAACTTTATCTACCAGACCCGCAGCTATCTCGAACAGTGGTTGCCGATGCTGGAAACCAACAACCGCAGCTAC
CTGACGGTCGCCATTGGCTGTACCGGCGGTAAGCACCGTTCAGTCTACGTAGCAGAACAGCTGGCCGACTACTTCCGCTC
ACGCGGCAAAAACGTGCAGTCGCGCCACCGCACGCTGGAAAAACGCAAACAATGA

Upstream 100 bases:

>100_bases
ACGATACTGTTTAGCCACGATGGATCCCGGTTCGGACAGGGATCCTAAAGTTTCTAACGGTGGCGATAAACGCCACTGAG
ATGCCAGGGGGAGTTGCCAC

Downstream 100 bases:

>100_bases
CGGTCAAACAAACGGTTGAAATCAAAAACAAGCTGGGGATGCACGCGCGCCCGGCGATGAAGCTGTTTGAGCTGGTGCAG
AGCTTTGATGCCGAGGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLANTLAERNSSAAVSIDVRNMPESPEVFEYAMTQLPDSFSP
QLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEESDLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKREREL
TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLEQWLPMLETNNRSY
LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRKQ

Sequences:

>Translated_284_residues
MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLANTLAERNSSAAVSIDVRNMPESPEVFEYAMTQLPDSFSP
QLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEESDLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKREREL
TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLEQWLPMLETNNRSY
LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRKQ
>Mature_284_residues
MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLANTLAERNSSAAVSIDVRNMPESPEVFEYAMTQLPDSFSP
QLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEESDLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKREREL
TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLEQWLPMLETNNRSY
LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRKQ

Specific function: Displays ATPase and GTPase activities [H]

COG id: COG1660

COG function: function code R; Predicted P-loop-containing kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0042 family [H]

Homologues:

Organism=Escherichia coli, GI1789598, Length=283, Percent_Identity=94.6996466431095, Blast_Score=556, Evalue=1e-160,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005337 [H]

Pfam domain/function: PF03668 ATP_bind_2 [H]

EC number: NA

Molecular weight: Translated: 32565; Mature: 32565

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLANTLAERNSSAAVSIDVRNM
CEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCEEEHHHHHHHHHHCCCCCEEEEEECCC
PESPEVFEYAMTQLPDSFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEES
CCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHH
DLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV
HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEE
FDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLEQWLPMLETNNRSY
EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRKQ
EEEEEECCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLANTLAERNSSAAVSIDVRNM
CEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCEEEHHHHHHHHHHCCCCCEEEEEECCC
PESPEVFEYAMTQLPDSFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEES
CCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHH
DLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV
HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEE
FDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLEQWLPMLETNNRSY
EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRKQ
EEEEEECCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA