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The map label for this gene is yrbA [H]

Identifier: 157372588

GI number: 157372588

Start: 4827820

End: 4828074

Strand: Reverse

Name: yrbA [H]

Synonym: Spro_4355

Alternate gene names: 157372588

Gene position: 4828074-4827820 (Counterclockwise)

Preceding gene: 157372589

Following gene: 157372587

Centisome position: 88.61

GC content: 50.2

Gene sequence:

>255_bases
ATGGAAAATAACGAGATTAAAGACGTGCTGATGCGAGCATTGGCACTGGATGAAGCACATGTTACCGGTGACGGTAGCCA
TTTTCAGGTGATCGTGGTCGGCGAGCTGTTTGCCGCCATGAGCCGCGTCAAGAAACAACAGACGGTGTATGCACCGCTGA
TGGAATACATTGCGGACAACCGAATTCATGCCTTGTCGATCAAGGCGTATACCCCAGAAGAGTGGCAGCGAGATCGCAAA
CTCAACGGATTTTAA

Upstream 100 bases:

>100_bases
GCCCCTGTTACACAGGGGCTTTTTCTTTAGTTTAAGAAAACGTCTGATTCCACTAAGATGTCAGGCTGATTATGATCCTT
TTGATGCAGAACTGGATACT

Downstream 100 bases:

>100_bases
GGCTGTTTGCCCAGCGGGGCGGGCAGCGTCAGTTTAGATAATAGAGAGTAGTCAAATGGATAAATTTCGTGTGCAGGGCC
GGACCCGCCTAAGCGGTGAA

Product: BolA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MENNEIKDVLMRALALDEAHVTGDGSHFQVIVVGELFAAMSRVKKQQTVYAPLMEYIADNRIHALSIKAYTPEEWQRDRK
LNGF

Sequences:

>Translated_84_residues
MENNEIKDVLMRALALDEAHVTGDGSHFQVIVVGELFAAMSRVKKQQTVYAPLMEYIADNRIHALSIKAYTPEEWQRDRK
LNGF
>Mature_84_residues
MENNEIKDVLMRALALDEAHVTGDGSHFQVIVVGELFAAMSRVKKQQTVYAPLMEYIADNRIHALSIKAYTPEEWQRDRK
LNGF

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

Organism=Escherichia coli, GI87082226, Length=84, Percent_Identity=83.3333333333333, Blast_Score=152, Evalue=5e-39,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 9620; Mature: 9620

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNEIKDVLMRALALDEAHVTGDGSHFQVIVVGELFAAMSRVKKQQTVYAPLMEYIADN
CCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RIHALSIKAYTPEEWQRDRKLNGF
CEEEEEEECCCCHHHHHCCCCCCC
>Mature Secondary Structure
MENNEIKDVLMRALALDEAHVTGDGSHFQVIVVGELFAAMSRVKKQQTVYAPLMEYIADN
CCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RIHALSIKAYTPEEWQRDRKLNGF
CEEEEEEECCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]