Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is 157372486
Identifier: 157372486
GI number: 157372486
Start: 4715611
End: 4716087
Strand: Reverse
Name: 157372486
Synonym: Spro_4253
Alternate gene names: NA
Gene position: 4716087-4715611 (Counterclockwise)
Preceding gene: 157372487
Following gene: 157372485
Centisome position: 86.55
GC content: 41.93
Gene sequence:
>477_bases ATGACACTCGCAGAGAAAAAGTTGTCTTTGGTTGAAAACGATTTTCTCGTTCTGAACAGTAAAAGTAGCACCCTAATTAT CAAGCCGAAAAATATAACCATTCATCTTACTGAACTGCAGAGACGACTTTTTTGTATTTTGCTCAGTGGCGTAACCAAGA AGCAAGAAGTGATAGAGTCAGTATGGGAAAATAACCACGTTACTATCACTGACAACAACTATCATCAATTAATATATCAA TGCAGAACGTTGCTTTCCCGCCATGGTATACCTCCCGAAGTCATCAAAACCATCCCCCGATATGGCGTGAGATTCAACTA CTCGCCACTGGAAGAAGTCCTGAGCCAGCGCACCGTCAAGTTGCCTAAATGGCATAAGAAACTTGCCGGAATGCTCAGTG AGCGGCAAAGGTTGGTTCGCAATGTTCTGCTTCTTGTCGTTATTAATTATATAGTTATTGCCAGTGTCGTGGTTTGA
Upstream 100 bases:
>100_bases TCGGCGTTTTTAGTCGCTAACCCTTGACTGCTATCGGGCTATGTGGTCTCTTATTCATAACGAGGAATAATGGATTATTG CTGAAGGGTATATTTTAGTT
Downstream 100 bases:
>100_bases GTTCGATAGGCATGCCTACATTCCATTACGACGAGTGAGAGACGCTGCATGAGGTTTGGCATTGTTTACGGCGACCTGCC AATCATCGGCCGTATTGACA
Product: putative transcriptional regulator CadC
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTLAEKKLSLVENDFLVLNSKSSTLIIKPKNITIHLTELQRRLFCILLSGVTKKQEVIESVWENNHVTITDNNYHQLIYQ CRTLLSRHGIPPEVIKTIPRYGVRFNYSPLEEVLSQRTVKLPKWHKKLAGMLSERQRLVRNVLLLVVINYIVIASVVV
Sequences:
>Translated_158_residues MTLAEKKLSLVENDFLVLNSKSSTLIIKPKNITIHLTELQRRLFCILLSGVTKKQEVIESVWENNHVTITDNNYHQLIYQ CRTLLSRHGIPPEVIKTIPRYGVRFNYSPLEEVLSQRTVKLPKWHKKLAGMLSERQRLVRNVLLLVVINYIVIASVVV >Mature_157_residues TLAEKKLSLVENDFLVLNSKSSTLIIKPKNITIHLTELQRRLFCILLSGVTKKQEVIESVWENNHVTITDNNYHQLIYQC RTLLSRHGIPPEVIKTIPRYGVRFNYSPLEEVLSQRTVKLPKWHKKLAGMLSERQRLVRNVLLLVVINYIVIASVVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18298; Mature: 18167
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAEKKLSLVENDFLVLNSKSSTLIIKPKNITIHLTELQRRLFCILLSGVTKKQEVIES CCCHHHHHHHHCCCEEEEECCCCEEEEECCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHH VWENNHVTITDNNYHQLIYQCRTLLSRHGIPPEVIKTIPRYGVRFNYSPLEEVLSQRTVK HHCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCC LPKWHKKLAGMLSERQRLVRNVLLLVVINYIVIASVVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLAEKKLSLVENDFLVLNSKSSTLIIKPKNITIHLTELQRRLFCILLSGVTKKQEVIES CCHHHHHHHHCCCEEEEECCCCEEEEECCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHH VWENNHVTITDNNYHQLIYQCRTLLSRHGIPPEVIKTIPRYGVRFNYSPLEEVLSQRTVK HHCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCC LPKWHKKLAGMLSERQRLVRNVLLLVVINYIVIASVVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA