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The map label for this gene is yphB [H]

Identifier: 157372458

GI number: 157372458

Start: 4684029

End: 4684916

Strand: Reverse

Name: yphB [H]

Synonym: Spro_4225

Alternate gene names: 157372458

Gene position: 4684916-4684029 (Counterclockwise)

Preceding gene: 157372459

Following gene: 157372457

Centisome position: 85.98

GC content: 56.42

Gene sequence:

>888_bases
ATGGCATTGTTTGATATGGATAACGGCTGTCTCTCGTTGGTGGTTTCGTCGTTGGGTGGCAGCGTGTTGAAATTGGCCGC
GCACGGGCCAGAGGGAGAGATCCCTCTGCTGCGGCCTGCGGTGTTGCGTGATACCACGTCGGCGCTGCAATCAGGGTGTT
TTCCTCTGGTTCCTTTTGGCAATCGGGTGAATCAAAACCGCTTCAATTTCGAAGATCATGAATATCAGCTCAGCGCGAAT
ACCGACTGGGATCGGCACTATCTGCATGGCGACGGCTGGCTGCAGGAGTGGCAATGTGTTGAACAGGGTAGCAATCACCT
TCACTTGCGTTATCAGCATGAGGATGGCCCTTACCGTTATCAGGTAGAGCAATATTTCACCCTGCAGCAACATCAACTCA
GTATTGAATTGGCGGTAGAACACCGTGGTGAAAGGCCGATGCCCTATGGATTGGGTTGGCATCCGTATTTCCCGTTAACG
GCGGATACCCGAGTACAGGCATCCGCCGGGGCCTACTGGTTGGAGGCCGAAGACTGGCTGGCGGGCGAGCAGGCGGCACT
GACCGAGGCGCTGGATTTCTCCCAGCCAGGCCCGTTGCCGCGTCACTGGGTGAATAACGGTTTCAGCGGCTGGAACGGTG
AGGCGCGGATCCAGTGGCCGGAACAAGGCGCTCGGTTACGGATGAACACTCAGCCGGCTTGCCCGGTTTACTTCCTGTTC
GTCTCGGATCCGGCGTTTGATCCGGGTTATCAGTTCGACTTCTTCTGCCTGGAACCGATGTCGCATGCCGCTAACGGCCA
TAACATGGCTGACCTTGGTGGGCTGCGCCGCTTGGCTAAAGGGCAGCGGTTTAGCCAGACGATGCTGCTCAGTTATTCCT
CGTTTTAA

Upstream 100 bases:

>100_bases
GTTTTAAACTCGGGCAGGCTGCCGAGGCCTATGCTCTGATGGCTTCTGGCCAGTGCGGCAAAGTGGTGATCAATTTCGCC
GATTAATATCCGGGGGCACT

Downstream 100 bases:

>100_bases
GTCCGGAAATTAAAATTCGGATCTCCTTCACAGAACCCGTTTAAACCCTGCAACCGGTTACTGAAACCGGTTGCTGTTTT
TTCGTTTTTGAAACCATACT

Product: aldose 1-epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MALFDMDNGCLSLVVSSLGGSVLKLAAHGPEGEIPLLRPAVLRDTTSALQSGCFPLVPFGNRVNQNRFNFEDHEYQLSAN
TDWDRHYLHGDGWLQEWQCVEQGSNHLHLRYQHEDGPYRYQVEQYFTLQQHQLSIELAVEHRGERPMPYGLGWHPYFPLT
ADTRVQASAGAYWLEAEDWLAGEQAALTEALDFSQPGPLPRHWVNNGFSGWNGEARIQWPEQGARLRMNTQPACPVYFLF
VSDPAFDPGYQFDFFCLEPMSHAANGHNMADLGGLRRLAKGQRFSQTMLLSYSSF

Sequences:

>Translated_295_residues
MALFDMDNGCLSLVVSSLGGSVLKLAAHGPEGEIPLLRPAVLRDTTSALQSGCFPLVPFGNRVNQNRFNFEDHEYQLSAN
TDWDRHYLHGDGWLQEWQCVEQGSNHLHLRYQHEDGPYRYQVEQYFTLQQHQLSIELAVEHRGERPMPYGLGWHPYFPLT
ADTRVQASAGAYWLEAEDWLAGEQAALTEALDFSQPGPLPRHWVNNGFSGWNGEARIQWPEQGARLRMNTQPACPVYFLF
VSDPAFDPGYQFDFFCLEPMSHAANGHNMADLGGLRRLAKGQRFSQTMLLSYSSF
>Mature_294_residues
ALFDMDNGCLSLVVSSLGGSVLKLAAHGPEGEIPLLRPAVLRDTTSALQSGCFPLVPFGNRVNQNRFNFEDHEYQLSANT
DWDRHYLHGDGWLQEWQCVEQGSNHLHLRYQHEDGPYRYQVEQYFTLQQHQLSIELAVEHRGERPMPYGLGWHPYFPLTA
DTRVQASAGAYWLEAEDWLAGEQAALTEALDFSQPGPLPRHWVNNGFSGWNGEARIQWPEQGARLRMNTQPACPVYFLFV
SDPAFDPGYQFDFFCLEPMSHAANGHNMADLGGLRRLAKGQRFSQTMLLSYSSF

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788894, Length=291, Percent_Identity=51.2027491408935, Blast_Score=302, Evalue=2e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 33495; Mature: 33364

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFDMDNGCLSLVVSSLGGSVLKLAAHGPEGEIPLLRPAVLRDTTSALQSGCFPLVPFG
CEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECC
NRVNQNRFNFEDHEYQLSANTDWDRHYLHGDGWLQEWQCVEQGSNHLHLRYQHEDGPYRY
CCCCCCCCCCCCCEEEEECCCCCCCEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCEEE
QVEQYFTLQQHQLSIELAVEHRGERPMPYGLGWHPYFPLTADTRVQASAGAYWLEAEDWL
EHHHEEEEHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECHHHC
AGEQAALTEALDFSQPGPLPRHWVNNGFSGWNGEARIQWPEQGARLRMNTQPACPVYFLF
CCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCEEEECCCCCCCEEEEE
VSDPAFDPGYQFDFFCLEPMSHAANGHNMADLGGLRRLAKGQRFSQTMLLSYSSF
EECCCCCCCCCEEEEEECCHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCC
>Mature Secondary Structure 
ALFDMDNGCLSLVVSSLGGSVLKLAAHGPEGEIPLLRPAVLRDTTSALQSGCFPLVPFG
EEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECC
NRVNQNRFNFEDHEYQLSANTDWDRHYLHGDGWLQEWQCVEQGSNHLHLRYQHEDGPYRY
CCCCCCCCCCCCCEEEEECCCCCCCEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCEEE
QVEQYFTLQQHQLSIELAVEHRGERPMPYGLGWHPYFPLTADTRVQASAGAYWLEAEDWL
EHHHEEEEHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECHHHC
AGEQAALTEALDFSQPGPLPRHWVNNGFSGWNGEARIQWPEQGARLRMNTQPACPVYFLF
CCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCEEEECCCCCCCEEEEE
VSDPAFDPGYQFDFFCLEPMSHAANGHNMADLGGLRRLAKGQRFSQTMLLSYSSF
EECCCCCCCCCEEEEEECCHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]