Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is 157372442
Identifier: 157372442
GI number: 157372442
Start: 4667007
End: 4667267
Strand: Reverse
Name: 157372442
Synonym: Spro_4209
Alternate gene names: NA
Gene position: 4667267-4667007 (Counterclockwise)
Preceding gene: 157372443
Following gene: 157372441
Centisome position: 85.66
GC content: 52.11
Gene sequence:
>261_bases ATGCCAACCAGCATTGCTTTAAGCCCTCATTTTGAGAAGTTCGTTCATGAGCAAATCGACAGTGGGCGTTATGGCAACGT CAGCGAAGTGATACGGGCGGGTCTGCGTCTGCTCGAAGAACATGAGCGGGCGATGAAAATCGAACAGCTGCGAGTGGCTA TTGCACAGGGAATAGAAAGTGGTGAGGGAGTCCCAGCGGAGGAGGCGTTTGCGCGTTTGCGGACTAAATACCAACGGATG GTGGATAACGGAAGTGACTAA
Upstream 100 bases:
>100_bases GCGCCTTTTTTATTGGCTGAGTTTTGTACAAAAGCTTGACGAGTCGTCAGTCAATGAAATACTAATAGATAGTAACTAAC ACTACTTTTCGGAGACGGCT
Downstream 100 bases:
>100_bases TGGAGCTAACAATATCGCCGGCAGCGGTATGTGATATTGAAAATATTGGTGACCATATTGCGCAGGATAACCCAGTCCGT GCGCTTAGTTTTATCTCTGA
Product: CopG/Arc/MetJ family addiction module antidote protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MPTSIALSPHFEKFVHEQIDSGRYGNVSEVIRAGLRLLEEHERAMKIEQLRVAIAQGIESGEGVPAEEAFARLRTKYQRM VDNGSD
Sequences:
>Translated_86_residues MPTSIALSPHFEKFVHEQIDSGRYGNVSEVIRAGLRLLEEHERAMKIEQLRVAIAQGIESGEGVPAEEAFARLRTKYQRM VDNGSD >Mature_85_residues PTSIALSPHFEKFVHEQIDSGRYGNVSEVIRAGLRLLEEHERAMKIEQLRVAIAQGIESGEGVPAEEAFARLRTKYQRMV DNGSD
Specific function: Unknown
COG id: COG3609
COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0156 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005360 - InterPro: IPR010985 - InterPro: IPR022789 [H]
Pfam domain/function: PF03693 RHH_2 [H]
EC number: NA
Molecular weight: Translated: 9668; Mature: 9537
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSIALSPHFEKFVHEQIDSGRYGNVSEVIRAGLRLLEEHERAMKIEQLRVAIAQGIES CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GEGVPAEEAFARLRTKYQRMVDNGSD CCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PTSIALSPHFEKFVHEQIDSGRYGNVSEVIRAGLRLLEEHERAMKIEQLRVAIAQGIES CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GEGVPAEEAFARLRTKYQRMVDNGSD CCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]