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The map label for this gene is pmfF [H]

Identifier: 157372372

GI number: 157372372

Start: 4594582

End: 4595124

Strand: Reverse

Name: pmfF [H]

Synonym: Spro_4139

Alternate gene names: 157372372

Gene position: 4595124-4594582 (Counterclockwise)

Preceding gene: 157372373

Following gene: 157372371

Centisome position: 84.33

GC content: 56.17

Gene sequence:

>543_bases
ATGCAAGCGCACCAAAAATGGAAATTGTTGCCGGCGACGTTGACCTTGACGGTGGGTTTACTGAATGTAGCTCCGGTTTG
GGCGGAAAATATGCGCTTGTTCGGCGAAGTGGTGATGGAGCCCTGTGCGCTGTTGCCGGGGGATGAGAATATTTCGCTTG
ATTTCGGTACGGTGGTGGAGAAATACCTTTACCTGAACCAGCGCACGCACGGCAAACCCTTTCAACTGCACCTGACGGGC
TGTGATGTTCAACCCGGCAGCGGCGTGACTTTGACCTTCAGCGGTACACCTAATGTTGCCTTGCCCGGGCTGTTGGCGCT
GGACGGCGGTAGCCAGGCCAGCGGCATCGCTATTGGTATGGAGACAGTGGCGGGGAAGGTGCTGCCGTTTAACGAGGTCA
GCGAGGTTTACCCGTTGACGCCCGGCGATAACGTAATCACCCTGCAGGCTTACGTGCAGGGTGAACCGGACGCACTTAAT
AACCAGGGTATTCGGCATGGTAATTTCAGTGCAGTGGCAACCTTCAGCCTGGCCTATCCCTGA

Upstream 100 bases:

>100_bases
GGTGGTGCCGGTAAAGGATCTCGAACCCGGCTGGAATCTGACAGCAGGCACGTTCGAAGCGATGGCAACCCTGCTGGCTG
ACTATCAATAAGGTAATTCA

Downstream 100 bases:

>100_bases
CGCCAAATAGTGAACACTGGCAAGCCGCTTACCAATGGCTATGCCGCACGCGTTCACATGCGCCGACCTGGGCCGGCGTA
TGGCATTTGCGGTTTCACTG

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MQAHQKWKLLPATLTLTVGLLNVAPVWAENMRLFGEVVMEPCALLPGDENISLDFGTVVEKYLYLNQRTHGKPFQLHLTG
CDVQPGSGVTLTFSGTPNVALPGLLALDGGSQASGIAIGMETVAGKVLPFNEVSEVYPLTPGDNVITLQAYVQGEPDALN
NQGIRHGNFSAVATFSLAYP

Sequences:

>Translated_180_residues
MQAHQKWKLLPATLTLTVGLLNVAPVWAENMRLFGEVVMEPCALLPGDENISLDFGTVVEKYLYLNQRTHGKPFQLHLTG
CDVQPGSGVTLTFSGTPNVALPGLLALDGGSQASGIAIGMETVAGKVLPFNEVSEVYPLTPGDNVITLQAYVQGEPDALN
NQGIRHGNFSAVATFSLAYP
>Mature_180_residues
MQAHQKWKLLPATLTLTVGLLNVAPVWAENMRLFGEVVMEPCALLPGDENISLDFGTVVEKYLYLNQRTHGKPFQLHLTG
CDVQPGSGVTLTFSGTPNVALPGLLALDGGSQASGIAIGMETVAGKVLPFNEVSEVYPLTPGDNVITLQAYVQGEPDALN
NQGIRHGNFSAVATFSLAYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1788674, Length=152, Percent_Identity=28.9473684210526, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19163; Mature: 19163

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAHQKWKLLPATLTLTVGLLNVAPVWAENMRLFGEVVMEPCALLPGDENISLDFGTVVE
CCCCCCEEEEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHH
KYLYLNQRTHGKPFQLHLTGCDVQPGSGVTLTFSGTPNVALPGLLALDGGSQASGIAIGM
HHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCEEEEH
ETVAGKVLPFNEVSEVYPLTPGDNVITLQAYVQGEPDALNNQGIRHGNFSAVATFSLAYP
HHHCCCCCCCCCHHHEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MQAHQKWKLLPATLTLTVGLLNVAPVWAENMRLFGEVVMEPCALLPGDENISLDFGTVVE
CCCCCCEEEEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHH
KYLYLNQRTHGKPFQLHLTGCDVQPGSGVTLTFSGTPNVALPGLLALDGGSQASGIAIGM
HHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCEEEEH
ETVAGKVLPFNEVSEVYPLTPGDNVITLQAYVQGEPDALNNQGIRHGNFSAVATFSLAYP
HHHCCCCCCCCCHHHEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7959033 [H]