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The map label for this gene is 157372371

Identifier: 157372371

GI number: 157372371

Start: 4593443

End: 4594420

Strand: Reverse

Name: 157372371

Synonym: Spro_4138

Alternate gene names: NA

Gene position: 4594420-4593443 (Counterclockwise)

Preceding gene: 157372372

Following gene: 157372370

Centisome position: 84.32

GC content: 55.01

Gene sequence:

>978_bases
ATGCGGTTAGTGGGGCGGAAAGGAAGGGGGGAAGAGCGGCTGGCGCAATGGAGTGCGCAGGACGCGCTGGTGCTGAAATG
GGTTGCGTTGCGGATTGAGGGACTACTGCCCACTCATGCCAGATGTGCGCACTTAAAAGGCCACGGCGGGGGAAGGGAGT
CGGTCCGGCAGGCTGCCAGGGCGCTGGCGAGTGGAGAGTTTAATTTTGTTTACCGCACCGACATTCGCGGCTATTACCGC
CATATTCGCAAAGAACAGTTGCTGAGCCAGATCCAGAGTTATGTGGCTGACCCGGTATTACATGATTTATTACGACAGTA
TTTGTATTACAGCGTTGAAGACGGTGGTGAGTTTCACACGCCTAAACAGGGAATTTGCCGCAGTTGCCCACTAAGCCCGT
TATTCGGTGCCAGTTTGCTTTACCACGTGGATGCGCATTTTAGCGCGCAGGAAGGGATTTTTTATAGCCGTTATATGGAT
GACTTTTTGCTGTTGACCCGTACCCGTTGGCCATTGCGCCGTGCGGTGAAAAAACTGCACCAATTTTTTAATCTGGGTGG
TTTTGAAACCCACCCGGATAAAACTCAACTGGGGAGAATTGAACAGGGATTCGACTGGCTGGGAGTTGAGTTTAGCGACG
CGGAGCCTTGCATAGCCGCGCGCGCATTATCGAACCATCACGCCCGACGCCTGCGGCTTTACGAGCAGGCCCGCAGACGT
GGCTTGTCGGCAGCGGCAACCCAGGCCCGGGTGCAGGCATATGAGGCGCGATGGAAAATATGGGCGGATGGGCTGCTGTC
TGCGGCTGACTGTGCGTCGCGTAGTCAAAAAGCCCCCCCTAAAGTTGGCGAGATAGTGGATTGGTCCAAGAACATGCGAG
CTAGCGTCGTATACCCCCCCGCGGTTGCTGGCTCCCCGATACACGACCTAGACCCTGTTGAATTCATTGAGGAACCTGAA
TGCGTGCGGATAAAATGA

Upstream 100 bases:

>100_bases
GCCGACCTGGGCCGGCGTATGGCATTTGCGGTTTCACTGGGGTGAGCAGGGCGCCCGTTTGCAACGGCAGGTTGAACGGG
GCGACTATCGCCTTTCGCCC

Downstream 100 bases:

>100_bases
TTAGAAATATGATATATGCTGGCAGTTGTTGCGTCGCGTGTACGTCCTGTTACGCGTTTGAATGGAGTGGTAACAGCTCG
ACGAATAATGGATATATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: RNA-Directed DNA Polymerase; Reverse Transcriptase; Reverse Transcriptase Subfamily

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MRLVGRKGRGEERLAQWSAQDALVLKWVALRIEGLLPTHARCAHLKGHGGGRESVRQAARALASGEFNFVYRTDIRGYYR
HIRKEQLLSQIQSYVADPVLHDLLRQYLYYSVEDGGEFHTPKQGICRSCPLSPLFGASLLYHVDAHFSAQEGIFYSRYMD
DFLLLTRTRWPLRRAVKKLHQFFNLGGFETHPDKTQLGRIEQGFDWLGVEFSDAEPCIAARALSNHHARRLRLYEQARRR
GLSAAATQARVQAYEARWKIWADGLLSAADCASRSQKAPPKVGEIVDWSKNMRASVVYPPAVAGSPIHDLDPVEFIEEPE
CVRIK

Sequences:

>Translated_325_residues
MRLVGRKGRGEERLAQWSAQDALVLKWVALRIEGLLPTHARCAHLKGHGGGRESVRQAARALASGEFNFVYRTDIRGYYR
HIRKEQLLSQIQSYVADPVLHDLLRQYLYYSVEDGGEFHTPKQGICRSCPLSPLFGASLLYHVDAHFSAQEGIFYSRYMD
DFLLLTRTRWPLRRAVKKLHQFFNLGGFETHPDKTQLGRIEQGFDWLGVEFSDAEPCIAARALSNHHARRLRLYEQARRR
GLSAAATQARVQAYEARWKIWADGLLSAADCASRSQKAPPKVGEIVDWSKNMRASVVYPPAVAGSPIHDLDPVEFIEEPE
CVRIK
>Mature_325_residues
MRLVGRKGRGEERLAQWSAQDALVLKWVALRIEGLLPTHARCAHLKGHGGGRESVRQAARALASGEFNFVYRTDIRGYYR
HIRKEQLLSQIQSYVADPVLHDLLRQYLYYSVEDGGEFHTPKQGICRSCPLSPLFGASLLYHVDAHFSAQEGIFYSRYMD
DFLLLTRTRWPLRRAVKKLHQFFNLGGFETHPDKTQLGRIEQGFDWLGVEFSDAEPCIAARALSNHHARRLRLYEQARRR
GLSAAATQARVQAYEARWKIWADGLLSAADCASRSQKAPPKVGEIVDWSKNMRASVVYPPAVAGSPIHDLDPVEFIEEPE
CVRIK

Specific function: Unknown

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36969; Mature: 36969

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50878 RT_POL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVGRKGRGEERLAQWSAQDALVLKWVALRIEGLLPTHARCAHLKGHGGGRESVRQAAR
CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHH
ALASGEFNFVYRTDIRGYYRHIRKEQLLSQIQSYVADPVLHDLLRQYLYYSVEDGGEFHT
HHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEECCCCCCCCC
PKQGICRSCPLSPLFGASLLYHVDAHFSAQEGIFYSRYMDDFLLLTRTRWPLRRAVKKLH
CHHHHHHCCCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
QFFNLGGFETHPDKTQLGRIEQGFDWLGVEFSDAEPCIAARALSNHHARRLRLYEQARRR
HHHCCCCCCCCCCHHHHCCHHCCCCEECEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GLSAAATQARVQAYEARWKIWADGLLSAADCASRSQKAPPKVGEIVDWSKNMRASVVYPP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEECC
AVAGSPIHDLDPVEFIEEPECVRIK
CCCCCCCCCCCCHHHHCCCCCEECC
>Mature Secondary Structure
MRLVGRKGRGEERLAQWSAQDALVLKWVALRIEGLLPTHARCAHLKGHGGGRESVRQAAR
CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHH
ALASGEFNFVYRTDIRGYYRHIRKEQLLSQIQSYVADPVLHDLLRQYLYYSVEDGGEFHT
HHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEECCCCCCCCC
PKQGICRSCPLSPLFGASLLYHVDAHFSAQEGIFYSRYMDDFLLLTRTRWPLRRAVKKLH
CHHHHHHCCCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
QFFNLGGFETHPDKTQLGRIEQGFDWLGVEFSDAEPCIAARALSNHHARRLRLYEQARRR
HHHCCCCCCCCCCHHHHCCHHCCCCEECEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GLSAAATQARVQAYEARWKIWADGLLSAADCASRSQKAPPKVGEIVDWSKNMRASVVYPP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEECC
AVAGSPIHDLDPVEFIEEPECVRIK
CCCCCCCCCCCCHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA