| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is ilvB [H]
Identifier: 157372190
GI number: 157372190
Start: 4384429
End: 4386072
Strand: Reverse
Name: ilvB [H]
Synonym: Spro_3956
Alternate gene names: 157372190
Gene position: 4386072-4384429 (Counterclockwise)
Preceding gene: 157372191
Following gene: 157372188
Centisome position: 80.5
GC content: 61.5
Gene sequence:
>1644_bases ATGATGAGCGAGAAAATAACGGTTGGCGAGGCGATAGCCCGGACTCTGGAACAGTACGAGGTGTCGGCGATGTACGGCAT CATTTCGATTCATAATCTGCCGATTGCCGATGCGGTGGGGCAGCGCGGCAACATTCGCTTTGTGCCGGCACGCGGTGAGG CGGGGGCCGTGACCATGGCCGATGCCCACGGCCGTTTCTCCGGTCTGGGCGTGGCCTTGACCAGTACCGGTGCCGGTGCC GGCAATGCGGTCGGTGCGATGATCGAGGCGATGAACGCCAATACGCCGTTGCTGCACATTACCGGTCAGGTGGAAAAAGC CTGGCTGGATGCCGACGCCGGGTTCATTCATGAAACCCGCGATCAATTGGGTTTCCTGCGCGCCTGCTCCAAACGCGCGT ATCGGGTTAACTCTGCGGAACAGGCGGTGGCAGTGATCCAACGGGCCATTCTCGACGCGCAGACGGTGCCTTGCGGCCCG GTGGCGGTAGAGATCCCGATCGATATTCAAAGCAGCCTGGTTTCCAGCGCGGTGCTGAGCCAGCCGGTGATGCCTGCGCC ACTGCCGCCAGCCAGTGACGACGTGGTTGAACGGTTGTATCAGCGGCTGAAACAGGCCAAACGCCCACTGTTATGGCTGG GCGGCGGTGCGCTGGGCTGCGCTGAGGCGGTGCGTAAACTGGCGGATGCCGGTGTGGCAGTGATCTCCAGCACTCACGGG CGCGGCATTCTGCCTGATAGCCACCCGCGCAGCCTGCGTGCGTTCCATAATTCGCCGAGCATTGAGGCGATCCTGACGCA GTGCGATCTGACGCTGGTGGCCGGTTCACGCCTGCGCAGCAATGAAACACGTACCTGGACGCTGCCGCTGCCGCGCCCAT TGGTACAGATTGATATTGATCCGGCGGCGGCCAATCGCAACTATTTGGCCGACGAACAAATCAACGGCGACTGTGGTGCC TTGCTTAAAGCACTGGCTGCCCGAGTTAGCTCAGGTGAAAAGGTCAATGCCGAGTGGGATAGCGAAATCGCCCACGCGGT GCAGCAGGCGGAAAGCGCGCTGCGCCAACAGTCGGGGGAATATGCCAAATTAAACGACGCCATTGCCGCCGCGCTGCCGC AGGATGGGCTGCTGGTGCGTGATATCACCGTCTCCGGCAGCGTTTGGGGCAGCCGTTTGTTCCGCGCGATTTCGCCGCTG TGTAACATTCACTCGCTGGCCGGGGCGATTGGCATGGGCTTGCCGATGGCGATTGGTACCGCGATCGCTAACCCGCAGCG CAAGGTGGTCGGGCTGGTGGGCGACGGCGGGTTGGCGTTAGGCCTGGGAGAGCTGGCGACCATGGCGCAGGAGCAGGCCA ATATCACTTTGCTGATTATGAACGACGGCGGTTACGGTGTGATGCGCGGCATTCAGGATAAATACTTTGCCGGTCGTCAG TACTATAACGAACTGCACACTCCGGCCTTTACGCTGGTGGCCGAAGCTATGGGGCTGAAAGCCTGGAAGGTCGACAGCGC GGCGCAGTTCAGCGGCGTCTTGGCAGAGGCGATTAACTATCCGGGGCCGTCGGTGGTGGAGGTGGACATGAACAGCATTG GGCCGTTGACCTTCGCCGGACCACCGCAGAAAACCCTGTACTGA
Upstream 100 bases:
>100_bases CAAAAAAGCCTGTATCTGGCGCTTAGCCATCAGGTGAATCGCTGGAGCGATTAGTTTTGAGCGACGGTGCATACCCTACA ACGAACATATAAGAAGGCTG
Downstream 100 bases:
>100_bases GTCGTGACAGATTGAACGACACCTTAATCAGTAAGGTGTCGTTCAAATGAAGTTAATTTTTATTAAATATTCCCAGGGCG TCGACTATCAGTGAAATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: AHAS-I; Acetohydroxy-acid synthase I large subunit; ALS-I [H]
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MMSEKITVGEAIARTLEQYEVSAMYGIISIHNLPIADAVGQRGNIRFVPARGEAGAVTMADAHGRFSGLGVALTSTGAGA GNAVGAMIEAMNANTPLLHITGQVEKAWLDADAGFIHETRDQLGFLRACSKRAYRVNSAEQAVAVIQRAILDAQTVPCGP VAVEIPIDIQSSLVSSAVLSQPVMPAPLPPASDDVVERLYQRLKQAKRPLLWLGGGALGCAEAVRKLADAGVAVISSTHG RGILPDSHPRSLRAFHNSPSIEAILTQCDLTLVAGSRLRSNETRTWTLPLPRPLVQIDIDPAAANRNYLADEQINGDCGA LLKALAARVSSGEKVNAEWDSEIAHAVQQAESALRQQSGEYAKLNDAIAAALPQDGLLVRDITVSGSVWGSRLFRAISPL CNIHSLAGAIGMGLPMAIGTAIANPQRKVVGLVGDGGLALGLGELATMAQEQANITLLIMNDGGYGVMRGIQDKYFAGRQ YYNELHTPAFTLVAEAMGLKAWKVDSAAQFSGVLAEAINYPGPSVVEVDMNSIGPLTFAGPPQKTLY
Sequences:
>Translated_547_residues MMSEKITVGEAIARTLEQYEVSAMYGIISIHNLPIADAVGQRGNIRFVPARGEAGAVTMADAHGRFSGLGVALTSTGAGA GNAVGAMIEAMNANTPLLHITGQVEKAWLDADAGFIHETRDQLGFLRACSKRAYRVNSAEQAVAVIQRAILDAQTVPCGP VAVEIPIDIQSSLVSSAVLSQPVMPAPLPPASDDVVERLYQRLKQAKRPLLWLGGGALGCAEAVRKLADAGVAVISSTHG RGILPDSHPRSLRAFHNSPSIEAILTQCDLTLVAGSRLRSNETRTWTLPLPRPLVQIDIDPAAANRNYLADEQINGDCGA LLKALAARVSSGEKVNAEWDSEIAHAVQQAESALRQQSGEYAKLNDAIAAALPQDGLLVRDITVSGSVWGSRLFRAISPL CNIHSLAGAIGMGLPMAIGTAIANPQRKVVGLVGDGGLALGLGELATMAQEQANITLLIMNDGGYGVMRGIQDKYFAGRQ YYNELHTPAFTLVAEAMGLKAWKVDSAAQFSGVLAEAINYPGPSVVEVDMNSIGPLTFAGPPQKTLY >Mature_547_residues MMSEKITVGEAIARTLEQYEVSAMYGIISIHNLPIADAVGQRGNIRFVPARGEAGAVTMADAHGRFSGLGVALTSTGAGA GNAVGAMIEAMNANTPLLHITGQVEKAWLDADAGFIHETRDQLGFLRACSKRAYRVNSAEQAVAVIQRAILDAQTVPCGP VAVEIPIDIQSSLVSSAVLSQPVMPAPLPPASDDVVERLYQRLKQAKRPLLWLGGGALGCAEAVRKLADAGVAVISSTHG RGILPDSHPRSLRAFHNSPSIEAILTQCDLTLVAGSRLRSNETRTWTLPLPRPLVQIDIDPAAANRNYLADEQINGDCGA LLKALAARVSSGEKVNAEWDSEIAHAVQQAESALRQQSGEYAKLNDAIAAALPQDGLLVRDITVSGSVWGSRLFRAISPL CNIHSLAGAIGMGLPMAIGTAIANPQRKVVGLVGDGGLALGLGELATMAQEQANITLLIMNDGGYGVMRGIQDKYFAGRQ YYNELHTPAFTLVAEAMGLKAWKVDSAAQFSGVLAEAINYPGPSVVEVDMNSIGPLTFAGPPQKTLY
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=511, Percent_Identity=27.0058708414873, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI93004078, Length=486, Percent_Identity=24.2798353909465, Blast_Score=97, Evalue=5e-20, Organism=Escherichia coli, GI1790104, Length=541, Percent_Identity=28.2809611829945, Blast_Score=184, Evalue=1e-47, Organism=Escherichia coli, GI87081685, Length=541, Percent_Identity=28.0961182994455, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1786717, Length=565, Percent_Identity=25.4867256637168, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1787096, Length=563, Percent_Identity=23.4458259325044, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI1788716, Length=557, Percent_Identity=22.9802513464991, Blast_Score=87, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17542570, Length=512, Percent_Identity=25.9765625, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17531299, Length=513, Percent_Identity=23.3918128654971, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17531301, Length=513, Percent_Identity=23.3918128654971, Blast_Score=89, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6323755, Length=564, Percent_Identity=24.822695035461, Blast_Score=160, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6320816, Length=561, Percent_Identity=22.9946524064171, Blast_Score=84, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6323073, Length=517, Percent_Identity=22.4371373307544, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323163, Length=517, Percent_Identity=21.4700193423598, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI19922626, Length=488, Percent_Identity=24.3852459016393, Blast_Score=94, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 57642; Mature: 57642
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSEKITVGEAIARTLEQYEVSAMYGIISIHNLPIADAVGQRGNIRFVPARGEAGAVTMA CCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHCCCCCCEEEEECCCCCCEEEEE DAHGRFSGLGVALTSTGAGAGNAVGAMIEAMNANTPLLHITGQVEKAWLDADAGFIHETR CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCHHHHHH DQLGFLRACSKRAYRVNSAEQAVAVIQRAILDAQTVPCGPVAVEIPIDIQSSLVSSAVLS HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHC QPVMPAPLPPASDDVVERLYQRLKQAKRPLLWLGGGALGCAEAVRKLADAGVAVISSTHG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCEEEEECCCC RGILPDSHPRSLRAFHNSPSIEAILTQCDLTLVAGSRLRSNETRTWTLPLPRPLVQIDID CCCCCCCCCHHHHHHCCCCCHHHHHHHCCEEEEECCCCCCCCCEEEECCCCCCEEEEECC PAAANRNYLADEQINGDCGALLKALAARVSSGEKVNAEWDSEIAHAVQQAESALRQQSGE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCC YAKLNDAIAAALPQDGLLVRDITVSGSVWGSRLFRAISPLCNIHSLAGAIGMGLPMAIGT CCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AIANPQRKVVGLVGDGGLALGLGELATMAQEQANITLLIMNDGGYGVMRGIQDKYFAGRQ HHCCCCEEEEEEECCCCCEECHHHHHHHHHHHCCEEEEEECCCCCHHHHCCHHHHHHHHH YYNELHTPAFTLVAEAMGLKAWKVDSAAQFSGVLAEAINYPGPSVVEVDMNSIGPLTFAG HHHHHCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECC PPQKTLY CCCCCCC >Mature Secondary Structure MMSEKITVGEAIARTLEQYEVSAMYGIISIHNLPIADAVGQRGNIRFVPARGEAGAVTMA CCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHCCCCCCEEEEECCCCCCEEEEE DAHGRFSGLGVALTSTGAGAGNAVGAMIEAMNANTPLLHITGQVEKAWLDADAGFIHETR CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCHHHHHH DQLGFLRACSKRAYRVNSAEQAVAVIQRAILDAQTVPCGPVAVEIPIDIQSSLVSSAVLS HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHC QPVMPAPLPPASDDVVERLYQRLKQAKRPLLWLGGGALGCAEAVRKLADAGVAVISSTHG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCEEEEECCCC RGILPDSHPRSLRAFHNSPSIEAILTQCDLTLVAGSRLRSNETRTWTLPLPRPLVQIDID CCCCCCCCCHHHHHHCCCCCHHHHHHHCCEEEEECCCCCCCCCEEEECCCCCCEEEEECC PAAANRNYLADEQINGDCGALLKALAARVSSGEKVNAEWDSEIAHAVQQAESALRQQSGE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCC YAKLNDAIAAALPQDGLLVRDITVSGSVWGSRLFRAISPLCNIHSLAGAIGMGLPMAIGT CCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AIANPQRKVVGLVGDGGLALGLGELATMAQEQANITLLIMNDGGYGVMRGIQDKYFAGRQ HHCCCCEEEEEEECCCCCEECHHHHHHHHHHHCCEEEEEECCCCCHHHHCCHHHHHHHHH YYNELHTPAFTLVAEAMGLKAWKVDSAAQFSGVLAEAINYPGPSVVEVDMNSIGPLTFAG HHHHHCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECC PPQKTLY CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2989782; 2989781; 7686882; 9278503 [H]