Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is creD [H]

Identifier: 157372128

GI number: 157372128

Start: 4314417

End: 4315781

Strand: Reverse

Name: creD [H]

Synonym: Spro_3894

Alternate gene names: 157372128

Gene position: 4315781-4314417 (Counterclockwise)

Preceding gene: 157372129

Following gene: 157372126

Centisome position: 79.21

GC content: 56.19

Gene sequence:

>1365_bases
ATGATGAAATCGATACTGTTTTGGAAAATAACCACTCTGCTGGGACTAATGATTTTAATGATTATCCCGGTAACGATGTT
AATGAATGTGATTGATGAGCGCAGCGGCTACCGCCAGAGCGTGGTTGGGCAGGTCAGTGAAAGCACCAGCCGGGCGCAGC
GCATTTTGGGGCCGCTGATCGTCATCCCTTACAGCGAGCGGGAAGAGAAGACGGATGACAAGGGGCAGAAGGTGGTGCAG
ATAGTTCGGCATCATCGCTATCTGCTGCCCGAGACGTTGCAGGTCAGCGGCAAGCCGAACGTGGAGGTGCGCAAGCTGGG
CATTTACCAGACTCAGGTCTATCAGGGACCGTTGCAGTTTAAGGTGAAGTTTGGCCAGCCGGATGTGACAGACCTGCAGC
GCAGCAATGTCGTGATTGGCCAGCCGTTCCTGCTGGTTTCGCTGAGCGATTCACGCGGCATCAAGAGCATCTCGCCGCTT
AGCAGCGCAGAGTCTCAAACGGTGTTTGAACCGGGTACCCAGGTAAACGTGTTACCTCAGGGTATTCATGCACCGCTGAC
GCTGCCCGCATTGCAAAAAGCGGGGCTGGATGCCGAGTTCACCCTGACGCTGGCCGGCACCAGCAGCCTGTCACTGGTAC
CGCTCGGGCGTAGCAGCGAATTGACGTTGCAGAGTAATTGGCCACATCCGAATTTCCTCGGTAACTTCTTGCCGGACGAA
CGCAAGGTGACGGAAAAAGGCTTCAGTGCCCGCTGGCGCAGCACCTGGTTTGCCAACAACATCAACAGTGCTTTCCATTA
CGACGACGAAATTCTTGGCGAAGACAAGTTGCCAACCTTCAGCACCAGCCTGATTGAACCGGTCGATCATTATCAACTGA
CCGAACGCGCGGTGAAGTATGCGGTGCTGTTTATCGGCCTGACATTTATGGCGTTCTTCCTGTTCGAAACCCTGACCGGC
CTGCGGGTACACCCGATTCAGTACCTGCTGGTCGGCACGGCACTGGTGCTGTTCTACCTGATCCTGCTGGCATTCTCCGA
GCATTTTGGCTTCGCCACCGCTTATCTGCTGGCCAGCATCGCCTGCAGTGGGTTGATCGCTTTTTACCTCAGCGCGGTAC
TGCGTGGCAGGCTGCGGGGGGCGCTGTTCGCCGCCAGTCTGTTGATGTTGTATGGCGTGCTGTATCTGTTGCTGCAGTCG
GAAGATAACGCGTTGGTGCTGGGGGCAGGGCTGTTGTTCGCTATTTTGGCGGGAATTATGCTGCTGACGCGTAAGTTGGA
CTGGTATCAGGTGGCCGATCCGGCGCGCTTGAACGGAGAAACGCCAACCGGCGCGGAGGAGAGCCGCTTCCGGTTGTGGA
AATAA

Upstream 100 bases:

>100_bases
TTCACCTTATCGCTCTGACTTCACCGTCCCTTCACATAACCACATTCTGCTTTCACCCGAGGGCATTATCGTGACTCCAT
TACCTACATGGAGCGCGGCG

Downstream 100 bases:

>100_bases
GCATCGGACTGGGCGCGGCTACCGCGCCCACGGGCATTACAGCAGGGGTTCCATCTCCAGCAGGATCTGTTCGCACCACT
GTTGCAGACGTTCTTCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MMKSILFWKITTLLGLMILMIIPVTMLMNVIDERSGYRQSVVGQVSESTSRAQRILGPLIVIPYSEREEKTDDKGQKVVQ
IVRHHRYLLPETLQVSGKPNVEVRKLGIYQTQVYQGPLQFKVKFGQPDVTDLQRSNVVIGQPFLLVSLSDSRGIKSISPL
SSAESQTVFEPGTQVNVLPQGIHAPLTLPALQKAGLDAEFTLTLAGTSSLSLVPLGRSSELTLQSNWPHPNFLGNFLPDE
RKVTEKGFSARWRSTWFANNINSAFHYDDEILGEDKLPTFSTSLIEPVDHYQLTERAVKYAVLFIGLTFMAFFLFETLTG
LRVHPIQYLLVGTALVLFYLILLAFSEHFGFATAYLLASIACSGLIAFYLSAVLRGRLRGALFAASLLMLYGVLYLLLQS
EDNALVLGAGLLFAILAGIMLLTRKLDWYQVADPARLNGETPTGAEESRFRLWK

Sequences:

>Translated_454_residues
MMKSILFWKITTLLGLMILMIIPVTMLMNVIDERSGYRQSVVGQVSESTSRAQRILGPLIVIPYSEREEKTDDKGQKVVQ
IVRHHRYLLPETLQVSGKPNVEVRKLGIYQTQVYQGPLQFKVKFGQPDVTDLQRSNVVIGQPFLLVSLSDSRGIKSISPL
SSAESQTVFEPGTQVNVLPQGIHAPLTLPALQKAGLDAEFTLTLAGTSSLSLVPLGRSSELTLQSNWPHPNFLGNFLPDE
RKVTEKGFSARWRSTWFANNINSAFHYDDEILGEDKLPTFSTSLIEPVDHYQLTERAVKYAVLFIGLTFMAFFLFETLTG
LRVHPIQYLLVGTALVLFYLILLAFSEHFGFATAYLLASIACSGLIAFYLSAVLRGRLRGALFAASLLMLYGVLYLLLQS
EDNALVLGAGLLFAILAGIMLLTRKLDWYQVADPARLNGETPTGAEESRFRLWK
>Mature_454_residues
MMKSILFWKITTLLGLMILMIIPVTMLMNVIDERSGYRQSVVGQVSESTSRAQRILGPLIVIPYSEREEKTDDKGQKVVQ
IVRHHRYLLPETLQVSGKPNVEVRKLGIYQTQVYQGPLQFKVKFGQPDVTDLQRSNVVIGQPFLLVSLSDSRGIKSISPL
SSAESQTVFEPGTQVNVLPQGIHAPLTLPALQKAGLDAEFTLTLAGTSSLSLVPLGRSSELTLQSNWPHPNFLGNFLPDE
RKVTEKGFSARWRSTWFANNINSAFHYDDEILGEDKLPTFSTSLIEPVDHYQLTERAVKYAVLFIGLTFMAFFLFETLTG
LRVHPIQYLLVGTALVLFYLILLAFSEHFGFATAYLLASIACSGLIAFYLSAVLRGRLRGALFAASLLMLYGVLYLLLQS
EDNALVLGAGLLFAILAGIMLLTRKLDWYQVADPARLNGETPTGAEESRFRLWK

Specific function: Unknown

COG id: COG4452

COG function: function code V; Inner membrane protein involved in colicin E2 resistance

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790862, Length=459, Percent_Identity=44.6623093681917, Blast_Score=380, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010364 [H]

Pfam domain/function: PF06123 CreD [H]

EC number: NA

Molecular weight: Translated: 50592; Mature: 50592

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKSILFWKITTLLGLMILMIIPVTMLMNVIDERSGYRQSVVGQVSESTSRAQRILGPLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEE
VIPYSEREEKTDDKGQKVVQIVRHHRYLLPETLQVSGKPNVEVRKLGIYQTQVYQGPLQF
EEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECEEHHEECCCEEE
KVKFGQPDVTDLQRSNVVIGQPFLLVSLSDSRGIKSISPLSSAESQTVFEPGTQVNVLPQ
EEECCCCCHHHHHHCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCEEEECCC
GIHAPLTLPALQKAGLDAEFTLTLAGTSSLSLVPLGRSSELTLQSNWPHPNFLGNFLPDE
CCCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCH
RKVTEKGFSARWRSTWFANNINSAFHYDDEILGEDKLPTFSTSLIEPVDHYQLTERAVKY
HHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHH
AVLFIGLTFMAFFLFETLTGLRVHPIQYLLVGTALVLFYLILLAFSEHFGFATAYLLASI
HHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACSGLIAFYLSAVLRGRLRGALFAASLLMLYGVLYLLLQSEDNALVLGAGLLFAILAGIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH
LLTRKLDWYQVADPARLNGETPTGAEESRFRLWK
HHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMKSILFWKITTLLGLMILMIIPVTMLMNVIDERSGYRQSVVGQVSESTSRAQRILGPLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEE
VIPYSEREEKTDDKGQKVVQIVRHHRYLLPETLQVSGKPNVEVRKLGIYQTQVYQGPLQF
EEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECEEHHEECCCEEE
KVKFGQPDVTDLQRSNVVIGQPFLLVSLSDSRGIKSISPLSSAESQTVFEPGTQVNVLPQ
EEECCCCCHHHHHHCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCEEEECCC
GIHAPLTLPALQKAGLDAEFTLTLAGTSSLSLVPLGRSSELTLQSNWPHPNFLGNFLPDE
CCCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCH
RKVTEKGFSARWRSTWFANNINSAFHYDDEILGEDKLPTFSTSLIEPVDHYQLTERAVKY
HHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHH
AVLFIGLTFMAFFLFETLTGLRVHPIQYLLVGTALVLFYLILLAFSEHFGFATAYLLASI
HHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACSGLIAFYLSAVLRGRLRGALFAASLLMLYGVLYLLLQSEDNALVLGAGLLFAILAGIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH
LLTRKLDWYQVADPARLNGETPTGAEESRFRLWK
HHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2835585; 3531171; 7610040; 9278503; 2984198 [H]