Click here to switch to the map view.

The map label for this gene is yojI [H]

Identifier: 157372087

GI number: 157372087

Start: 4262397

End: 4264049

Strand: Reverse

Name: yojI [H]

Synonym: Spro_3852

Alternate gene names: 157372087

Gene position: 4264049-4262397 (Counterclockwise)

Preceding gene: 157372091

Following gene: 157372086

Centisome position: 78.26

GC content: 57.59

Gene sequence:

>1653_bases
ATGGAGTTGCTACGGGTGGTTTACCGCCAGTATCGCTGGCCGTTTCTGGCGGTAATGGCGTTGACCATGGCCAGTGCGGC
GCTGGGCATAGGCATCATCGCCTTTATAAATTTGCGGCTGATGACGGTGGCGGGCAACCCGCTGGCCGTATTGCCTGAGT
TCCTCGGGCTGCTGGCGTTGCTGATGGCGGTCACGCTGGGCTCGCAGCTGGCGCTGACCACGCTCGGCCACCATTTTGTG
TTCCGACTGCGCGGCCAACTGGTGAAACAGATCCTGGATACCGATATCGAGCGGATAGAGCAACTGGGCAGCGCCTCACT
GTTGGCGAGTCTGGCCAGTGATATACGAAATATCACCATTGCCTTTGTTCGCCTGCCGGAGCTGGTGCAAGGGGTGATAC
TGACGCTGGGGTCGGCGGCCTATCTGGGCTGGCTATCTCCGCAGATGCTGGCGGTCACCGCCGTTTGGGTCGCGGTGACG
GTATTTGGCAGCGGCTGTCTGGTCTCGCGGGTGTATCGTCATTTGACCAGCGTGCGAGAGGCCGAAGAGCGCCTCTATGA
ACACTATCAGTCTGCGATTGACGGCCGCAAAGAGCTGGCATTGAACCGCGATCGTGCAAAAGCGCTGTACCAGCAGGCCT
ACCAGCCGGATGCCGAAGATTATCGACAGCACATTATCCGCGCCGATACCTACCATCTCAGTGCGGTGAACTGGTCGAAT
ATCATGATGTTGGGGGCGATTGGTTTGGTGTTTTACATGGCCAACAGCCTGGGCTGGGCCGATACCACCGTCGCGGCAAC
CTACTCGCTGACGTTGCTGTTCCTGCGTACCCCGTTGCTGCAGGCGGTGGGGGCATTCCCGACGCTGATCGGTGCCGAAG
TTGCCTTCGGCAAGGTCAAAGCGCTGCGACTTGCCGATTATCAACCCGAGTTTCCTGCGGTAGCGGCCAAAGCCTGGCAA
ACTCTGGAGCTGCGCGATGTGATGTTCCACTATGGCGCGACGGAGCAAAAAACGGGGTTCGCCGTTGGGCCGATCGACCT
GAGGTTGCAACGTGGTGAACTGGTCTTCCTGATTGGCGGTAACGGTAGTGGGAAGTCGACGCTGGCGATGTTGCTGACCG
GGTTATATCAGCCGGTCAGTGGACAAATCTTGCTGGATGGCGTGCCACAGACTCTGAACGATATGTCTGACTATCGTCGT
TTGTTCTCCGCCATTTTCACCGACTTTCATCCGTTCCACCATTTGCAGGGGCCTGAAGGCGAACAGCCGGATGCCGAACT
GGTGGAAAGCTGGCTTAACCGTTTGAACATGAAAAGCAAATTGCAATTCGACGGCCTGCGGGTAACTAATCCACAGTTGT
CCCAGGGGCAGCGCAAGCGACTGGCGCTGCTGCTGGCAGTGGCGGAGAAGCGGGATATTTTGCTATTGGACGAATGGGCG
GCGGATCAGGATCCGCAATTTCGTCGAATATTCTATCGTGAACTGCTACCGCAGTTACGCGCTTTGGGCAAAACGGTGTT
TGCCATCAGCCATGACGATCATTACTTCGAACATGCCGATCGGCTGCTGCAAATGCGTGACGGGCGCCTCAGCGAGTTGA
CCGGCAGCGAACGTGAACGTGCCAGCAAGGACTCTGTTTCGCAGATTGACTGA

Upstream 100 bases:

>100_bases
AGGAATCAATCGTTGGCGACAATATGAGAATTGTTATTGATATCACTTTTTGGCCGCTTACAATGCCTGCCATCTCAAGA
TTTCAGGCTAAGGGTTCTTC

Downstream 100 bases:

>100_bases
AATTAATATCACCCGGCCTGCACTATTGGGTTGGGTTATCCATTCTTCTCGCATGGCGCTATCCGCTAAAATCAGCATAT
CCCCGCGTTTCAGAGTCACT

Product: multidrug transporter membrane component/ATP-binding component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MELLRVVYRQYRWPFLAVMALTMASAALGIGIIAFINLRLMTVAGNPLAVLPEFLGLLALLMAVTLGSQLALTTLGHHFV
FRLRGQLVKQILDTDIERIEQLGSASLLASLASDIRNITIAFVRLPELVQGVILTLGSAAYLGWLSPQMLAVTAVWVAVT
VFGSGCLVSRVYRHLTSVREAEERLYEHYQSAIDGRKELALNRDRAKALYQQAYQPDAEDYRQHIIRADTYHLSAVNWSN
IMMLGAIGLVFYMANSLGWADTTVAATYSLTLLFLRTPLLQAVGAFPTLIGAEVAFGKVKALRLADYQPEFPAVAAKAWQ
TLELRDVMFHYGATEQKTGFAVGPIDLRLQRGELVFLIGGNGSGKSTLAMLLTGLYQPVSGQILLDGVPQTLNDMSDYRR
LFSAIFTDFHPFHHLQGPEGEQPDAELVESWLNRLNMKSKLQFDGLRVTNPQLSQGQRKRLALLLAVAEKRDILLLDEWA
ADQDPQFRRIFYRELLPQLRALGKTVFAISHDDHYFEHADRLLQMRDGRLSELTGSERERASKDSVSQID

Sequences:

>Translated_550_residues
MELLRVVYRQYRWPFLAVMALTMASAALGIGIIAFINLRLMTVAGNPLAVLPEFLGLLALLMAVTLGSQLALTTLGHHFV
FRLRGQLVKQILDTDIERIEQLGSASLLASLASDIRNITIAFVRLPELVQGVILTLGSAAYLGWLSPQMLAVTAVWVAVT
VFGSGCLVSRVYRHLTSVREAEERLYEHYQSAIDGRKELALNRDRAKALYQQAYQPDAEDYRQHIIRADTYHLSAVNWSN
IMMLGAIGLVFYMANSLGWADTTVAATYSLTLLFLRTPLLQAVGAFPTLIGAEVAFGKVKALRLADYQPEFPAVAAKAWQ
TLELRDVMFHYGATEQKTGFAVGPIDLRLQRGELVFLIGGNGSGKSTLAMLLTGLYQPVSGQILLDGVPQTLNDMSDYRR
LFSAIFTDFHPFHHLQGPEGEQPDAELVESWLNRLNMKSKLQFDGLRVTNPQLSQGQRKRLALLLAVAEKRDILLLDEWA
ADQDPQFRRIFYRELLPQLRALGKTVFAISHDDHYFEHADRLLQMRDGRLSELTGSERERASKDSVSQID
>Mature_550_residues
MELLRVVYRQYRWPFLAVMALTMASAALGIGIIAFINLRLMTVAGNPLAVLPEFLGLLALLMAVTLGSQLALTTLGHHFV
FRLRGQLVKQILDTDIERIEQLGSASLLASLASDIRNITIAFVRLPELVQGVILTLGSAAYLGWLSPQMLAVTAVWVAVT
VFGSGCLVSRVYRHLTSVREAEERLYEHYQSAIDGRKELALNRDRAKALYQQAYQPDAEDYRQHIIRADTYHLSAVNWSN
IMMLGAIGLVFYMANSLGWADTTVAATYSLTLLFLRTPLLQAVGAFPTLIGAEVAFGKVKALRLADYQPEFPAVAAKAWQ
TLELRDVMFHYGATEQKTGFAVGPIDLRLQRGELVFLIGGNGSGKSTLAMLLTGLYQPVSGQILLDGVPQTLNDMSDYRR
LFSAIFTDFHPFHHLQGPEGEQPDAELVESWLNRLNMKSKLQFDGLRVTNPQLSQGQRKRLALLLAVAEKRDILLLDEWA
ADQDPQFRRIFYRELLPQLRALGKTVFAISHDDHYFEHADRLLQMRDGRLSELTGSERERASKDSVSQID

Specific function: Mediates resistance to the antibacterial peptide microcin J25. Functions as an efflux pump for microcin J25. Requires TolC for export of microcin J25 [H]

COG id: COG4615

COG function: function code QP; ABC-type siderophore export system, fused ATPase and permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9665248, Length=222, Percent_Identity=28.3783783783784, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI1788540, Length=549, Percent_Identity=67.5774134790528, Blast_Score=745, Evalue=0.0,
Organism=Escherichia coli, GI87081791, Length=225, Percent_Identity=29.7777777777778, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1787370, Length=205, Percent_Identity=32.1951219512195, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI48994943, Length=264, Percent_Identity=27.6515151515151, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789032, Length=216, Percent_Identity=31.0185185185185, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787029, Length=228, Percent_Identity=28.5087719298246, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786253, Length=193, Percent_Identity=31.0880829015544, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1787143, Length=530, Percent_Identity=22.0754716981132, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787105, Length=224, Percent_Identity=28.125, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787112, Length=324, Percent_Identity=27.1604938271605, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI87081709, Length=234, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1790739, Length=228, Percent_Identity=30.7017543859649, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87081834, Length=216, Percent_Identity=30.0925925925926, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788761, Length=238, Percent_Identity=27.7310924369748, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1788225, Length=211, Percent_Identity=28.9099526066351, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1789672, Length=227, Percent_Identity=27.3127753303965, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1787547, Length=231, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786703, Length=227, Percent_Identity=29.9559471365639, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87082267, Length=211, Percent_Identity=27.4881516587678, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790467, Length=196, Percent_Identity=26.530612244898, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI48995001, Length=210, Percent_Identity=29.0476190476191, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1789891, Length=207, Percent_Identity=29.951690821256, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17543740, Length=581, Percent_Identity=23.2358003442341, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI193202349, Length=517, Percent_Identity=23.9845261121857, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17569081, Length=328, Percent_Identity=24.390243902439, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17565938, Length=481, Percent_Identity=22.8690228690229, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI193208177, Length=536, Percent_Identity=23.8805970149254, Blast_Score=76, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193209708, Length=228, Percent_Identity=30.2631578947368, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115533592, Length=504, Percent_Identity=22.8174603174603, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=204, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI212646699, Length=222, Percent_Identity=26.1261261261261, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17510237, Length=193, Percent_Identity=26.4248704663212, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24643674, Length=201, Percent_Identity=26.3681592039801, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017940
- InterPro:   IPR011527
- InterPro:   IPR003593
- InterPro:   IPR005898 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61458; Mature: 61458

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2 ; PS50929 ABC_TM1F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLRVVYRQYRWPFLAVMALTMASAALGIGIIAFINLRLMTVAGNPLAVLPEFLGLLAL
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHH
LMAVTLGSQLALTTLGHHFVFRLRGQLVKQILDTDIERIEQLGSASLLASLASDIRNITI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AFVRLPELVQGVILTLGSAAYLGWLSPQMLAVTAVWVAVTVFGSGCLVSRVYRHLTSVRE
HHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AEERLYEHYQSAIDGRKELALNRDRAKALYQQAYQPDAEDYRQHIIRADTYHLSAVNWSN
HHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCHHH
IMMLGAIGLVFYMANSLGWADTTVAATYSLTLLFLRTPLLQAVGAFPTLIGAEVAFGKVK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRLADYQPEFPAVAAKAWQTLELRDVMFHYGATEQKTGFAVGPIDLRLQRGELVFLIGG
HHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCEEEEEECCCEEEEECC
NGSGKSTLAMLLTGLYQPVSGQILLDGVPQTLNDMSDYRRLFSAIFTDFHPFHHLQGPEG
CCCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
EQPDAELVESWLNRLNMKSKLQFDGLRVTNPQLSQGQRKRLALLLAVAEKRDILLLDEWA
CCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCC
ADQDPQFRRIFYRELLPQLRALGKTVFAISHDDHYFEHADRLLQMRDGRLSELTGSERER
CCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCHHHCCCCHHHH
ASKDSVSQID
HCCCCCCCCC
>Mature Secondary Structure
MELLRVVYRQYRWPFLAVMALTMASAALGIGIIAFINLRLMTVAGNPLAVLPEFLGLLAL
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHH
LMAVTLGSQLALTTLGHHFVFRLRGQLVKQILDTDIERIEQLGSASLLASLASDIRNITI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AFVRLPELVQGVILTLGSAAYLGWLSPQMLAVTAVWVAVTVFGSGCLVSRVYRHLTSVRE
HHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AEERLYEHYQSAIDGRKELALNRDRAKALYQQAYQPDAEDYRQHIIRADTYHLSAVNWSN
HHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCHHH
IMMLGAIGLVFYMANSLGWADTTVAATYSLTLLFLRTPLLQAVGAFPTLIGAEVAFGKVK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRLADYQPEFPAVAAKAWQTLELRDVMFHYGATEQKTGFAVGPIDLRLQRGELVFLIGG
HHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCEEEEEECCCEEEEECC
NGSGKSTLAMLLTGLYQPVSGQILLDGVPQTLNDMSDYRRLFSAIFTDFHPFHHLQGPEG
CCCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
EQPDAELVESWLNRLNMKSKLQFDGLRVTNPQLSQGQRKRLALLLAVAEKRDILLLDEWA
CCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCC
ADQDPQFRRIFYRELLPQLRALGKTVFAISHDDHYFEHADRLLQMRDGRLSELTGSERER
CCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCHHHCCCCHHHH
ASKDSVSQID
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]