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The map label for this gene is ygaC [H]

Identifier: 157371945

GI number: 157371945

Start: 4100037

End: 4100375

Strand: Reverse

Name: ygaC [H]

Synonym: Spro_3710

Alternate gene names: 157371945

Gene position: 4100375-4100037 (Counterclockwise)

Preceding gene: 157371946

Following gene: 157371942

Centisome position: 75.25

GC content: 54.28

Gene sequence:

>339_bases
ATGTATTTACGGCCGGATGAAGTGGCTAGAGTGTTGGAGAATACTGGCTTTGAGCGTGATTATGTCACCGACCAGTCTTA
TGGTTACCGCAAGGGTGAGCACTACGTATATGTGAATCGTGAGGCGCGGATGGGCAGAACCGCGTTGGTGATCCACCCGG
CGCTGAAAGAGAAAAGCGTGCATTTTGCCACGCCGACCTCGCCGGTGCGCATCAGCAATCAGTACCTTGAGTTTCCCCTG
GATTTAAGCAGCGATGCCCCGAGTGCGCGTTACGGCATTCCCCACGGCTTCAGCTCGCGTGATGCGCTTTCGCGCTATAT
CTACAGCATGTTCCAGTAA

Upstream 100 bases:

>100_bases
AAGGATTATTCCTAAACCCACATCCATACCGAAAAATTTATTGTTTCATCTCATGATTACGGTAAGGTCGCTCAGCGGTC
CAGAACGAGAGGAGAAATCG

Downstream 100 bases:

>100_bases
TGCCTCCCCCGCCAGCGGGGGACACAATTTTACCAATTCGCAATCGCTTCCTGATTAAAACGCTCATTGTAAGCGCGGCG
AAACTGCGCCAGTTCGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MYLRPDEVARVLENTGFERDYVTDQSYGYRKGEHYVYVNREARMGRTALVIHPALKEKSVHFATPTSPVRISNQYLEFPL
DLSSDAPSARYGIPHGFSSRDALSRYIYSMFQ

Sequences:

>Translated_112_residues
MYLRPDEVARVLENTGFERDYVTDQSYGYRKGEHYVYVNREARMGRTALVIHPALKEKSVHFATPTSPVRISNQYLEFPL
DLSSDAPSARYGIPHGFSSRDALSRYIYSMFQ
>Mature_112_residues
MYLRPDEVARVLENTGFERDYVTDQSYGYRKGEHYVYVNREARMGRTALVIHPALKEKSVHFATPTSPVRISNQYLEFPL
DLSSDAPSARYGIPHGFSSRDALSRYIYSMFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789026, Length=111, Percent_Identity=63.0630630630631, Blast_Score=142, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018994 [H]

Pfam domain/function: PF09400 DUF2002 [H]

EC number: NA

Molecular weight: Translated: 12957; Mature: 12957

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLRPDEVARVLENTGFERDYVTDQSYGYRKGEHYVYVNREARMGRTALVIHPALKEKSV
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCE
HFATPTSPVRISNQYLEFPLDLSSDAPSARYGIPHGFSSRDALSRYIYSMFQ
EEECCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MYLRPDEVARVLENTGFERDYVTDQSYGYRKGEHYVYVNREARMGRTALVIHPALKEKSV
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCE
HFATPTSPVRISNQYLEFPLDLSSDAPSARYGIPHGFSSRDALSRYIYSMFQ
EEECCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]