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The map label for this gene is ydaL [H]

Identifier: 157371942

GI number: 157371942

Start: 4098411

End: 4098983

Strand: Reverse

Name: ydaL [H]

Synonym: Spro_3707

Alternate gene names: 157371942

Gene position: 4098983-4098411 (Counterclockwise)

Preceding gene: 157371945

Following gene: 157371940

Centisome position: 75.23

GC content: 58.12

Gene sequence:

>573_bases
ATGAGCAACCAGGACAAAGACTTTTTTGAACAGGCGATGGCGGATGTCATCCCGTTATCCAGCGCCCCCGAGACCCTGTA
CCTTAAACCGCAGGAGACGATGGATAAAAGTGCGCGGCGTGAGGCGCAGGCGCTGCGGCAGGAAAACTTTCTCAGCACCG
GCTTTCTCGAACTGATCCCTTGCGAAGTCTCGCTGGAATACAAAGGCGAGGGCATTCAGCAGGGGGTACTGGACAAACTG
AGCCATGGCCGCTATCCGCCGCAGGCCAGCCTGAACCTGCTGAAACAATCGGTGGAGGCTGCGCGGCAGGCGCTGTTTCG
CTTTATTTTGCAGGCAGAAAAGCAAAACCTGCGTTCGCTGCTGATTGTCCACGGCCGTGGTCGGGAAGAAGAGAGCCATG
CCAATATCATTCGCAGCTATCTCGCCAAATGGCTGGCACAGTTTGAACAGGTGCAGGCTTTTTGCCGGGCGCTGCCGCGT
GACGGCGGTGAAGGTGCCTGCTATGTCACGCTGCGCAAATCGGCGCAGGCCAAAGCCGACAATTTCGAGCGCCACGCCAA
GCGCAGCCGTTAG

Upstream 100 bases:

>100_bases
ACGACAATTGCGGAAAATTCCCGGCTTGCAACCGCGGCAAGCCGTCTTACAATCAGGTTCATCCCCGGCATTAAAGGCCC
AGTCTGAGAGTGGCAGAAAG

Downstream 100 bases:

>100_bases
GGGATTGTGGAACAGCAGCAGCCGGCAGCGTTGCCGCCGGCTGGAATAGGCTATTTATTAAAGAATTTATGGTCCAGCGA
ATAACGCCCGGCACCGGTGA

Product: Smr protein/MutS2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSNQDKDFFEQAMADVIPLSSAPETLYLKPQETMDKSARREAQALRQENFLSTGFLELIPCEVSLEYKGEGIQQGVLDKL
SHGRYPPQASLNLLKQSVEAARQALFRFILQAEKQNLRSLLIVHGRGREEESHANIIRSYLAKWLAQFEQVQAFCRALPR
DGGEGACYVTLRKSAQAKADNFERHAKRSR

Sequences:

>Translated_190_residues
MSNQDKDFFEQAMADVIPLSSAPETLYLKPQETMDKSARREAQALRQENFLSTGFLELIPCEVSLEYKGEGIQQGVLDKL
SHGRYPPQASLNLLKQSVEAARQALFRFILQAEKQNLRSLLIVHGRGREEESHANIIRSYLAKWLAQFEQVQAFCRALPR
DGGEGACYVTLRKSAQAKADNFERHAKRSR
>Mature_189_residues
SNQDKDFFEQAMADVIPLSSAPETLYLKPQETMDKSARREAQALRQENFLSTGFLELIPCEVSLEYKGEGIQQGVLDKLS
HGRYPPQASLNLLKQSVEAARQALFRFILQAEKQNLRSLLIVHGRGREEESHANIIRSYLAKWLAQFEQVQAFCRALPRD
GGEGACYVTLRKSAQAKADNFERHAKRSR

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1787602, Length=190, Percent_Identity=54.2105263157895, Blast_Score=215, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 21583; Mature: 21452

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQDKDFFEQAMADVIPLSSAPETLYLKPQETMDKSARREAQALRQENFLSTGFLELIP
CCCCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
CEVSLEYKGEGIQQGVLDKLSHGRYPPQASLNLLKQSVEAARQALFRFILQAEKQNLRSL
CEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
LIVHGRGREEESHANIIRSYLAKWLAQFEQVQAFCRALPRDGGEGACYVTLRKSAQAKAD
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHH
NFERHAKRSR
HHHHHHHCCC
>Mature Secondary Structure 
SNQDKDFFEQAMADVIPLSSAPETLYLKPQETMDKSARREAQALRQENFLSTGFLELIP
CCCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
CEVSLEYKGEGIQQGVLDKLSHGRYPPQASLNLLKQSVEAARQALFRFILQAEKQNLRSL
CEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
LIVHGRGREEESHANIIRSYLAKWLAQFEQVQAFCRALPRDGGEGACYVTLRKSAQAKAD
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHH
NFERHAKRSR
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]