| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yfjG [H]
Identifier: 157371924
GI number: 157371924
Start: 4080792
End: 4081226
Strand: Reverse
Name: yfjG [H]
Synonym: Spro_3689
Alternate gene names: 157371924
Gene position: 4081226-4080792 (Counterclockwise)
Preceding gene: 157371928
Following gene: 157371923
Centisome position: 74.9
GC content: 51.03
Gene sequence:
>435_bases ATGCCCCAGATCAGTCGATCTGCGTTAGTGCCATTCAGCGCCGAGCAGATGTATCAGTTGGTTAACGATGTTCATTCTTA TCCCGATTTTCTGCCAGGTTGTACCGGTAGCCGGGTGATTAACGCGTCCAACAATGAAATGACCGCTGCAGTAGATGTTG CCAAAGCCGGTATCAGTAAAACTTTTACCACGCGCAACACGCTGCTGGATAACCAAAGCATCAATATGCAACTGGTTGAT GGTCCGTTCCGCTCCTTGATGGGGGGCTGGCACTTTACGCCGCTCAGCCCGGAAGCCTGCAAGGTTGAGCTGCACCTTGA TTTTGAATTTACCAACAAATTGATCGAGTTGGCGTTCGGCAAGGTGTTTAAAGAGCTGGCGGGTAACATGGTGCAGGCAT TCACCCAGCGGGCGAAAGAGGTCTACAGTGTCTGA
Upstream 100 bases:
>100_bases AATTTTTCGCATTTTTGGCCTCTGTGTTGCATAGCAGATTTTTTGTTTGCCGATAGATAAATGGTATGATTTGTATGTTT TGTGTCTCACAGGAAATGAT
Downstream 100 bases:
>100_bases GATACGGGTCGAGGTGGTTTACGCCTTACCGGAGCGTCAGTATCTGCGCAATGTCACACTGGCGGAGGGCAGCAGCGTTG AGCAGGCGATTGTAGCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPQISRSALVPFSAEQMYQLVNDVHSYPDFLPGCTGSRVINASNNEMTAAVDVAKAGISKTFTTRNTLLDNQSINMQLVD GPFRSLMGGWHFTPLSPEACKVELHLDFEFTNKLIELAFGKVFKELAGNMVQAFTQRAKEVYSV
Sequences:
>Translated_144_residues MPQISRSALVPFSAEQMYQLVNDVHSYPDFLPGCTGSRVINASNNEMTAAVDVAKAGISKTFTTRNTLLDNQSINMQLVD GPFRSLMGGWHFTPLSPEACKVELHLDFEFTNKLIELAFGKVFKELAGNMVQAFTQRAKEVYSV >Mature_143_residues PQISRSALVPFSAEQMYQLVNDVHSYPDFLPGCTGSRVINASNNEMTAAVDVAKAGISKTFTTRNTLLDNQSINMQLVDG PFRSLMGGWHFTPLSPEACKVELHLDFEFTNKLIELAFGKVFKELAGNMVQAFTQRAKEVYSV
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Escherichia coli, GI1788972, Length=143, Percent_Identity=79.7202797202797, Blast_Score=248, Evalue=1e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 15979; Mature: 15848
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQISRSALVPFSAEQMYQLVNDVHSYPDFLPGCTGSRVINASNNEMTAAVDVAKAGISK CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCHH TFTTRNTLLDNQSINMQLVDGPFRSLMGGWHFTPLSPEACKVELHLDFEFTNKLIELAFG HHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHH KVFKELAGNMVQAFTQRAKEVYSV HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PQISRSALVPFSAEQMYQLVNDVHSYPDFLPGCTGSRVINASNNEMTAAVDVAKAGISK CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCHH TFTTRNTLLDNQSINMQLVDGPFRSLMGGWHFTPLSPEACKVELHLDFEFTNKLIELAFG HHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHH KVFKELAGNMVQAFTQRAKEVYSV HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7524073; 9205837; 9278503 [H]