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The map label for this gene is rnfH

Identifier: 157371923

GI number: 157371923

Start: 4080515

End: 4080799

Strand: Reverse

Name: rnfH

Synonym: Spro_3688

Alternate gene names: 157371923

Gene position: 4080799-4080515 (Counterclockwise)

Preceding gene: 157371924

Following gene: 157371919

Centisome position: 74.89

GC content: 56.84

Gene sequence:

>285_bases
GTGTCTGAGATACGGGTCGAGGTGGTTTACGCCTTACCGGAGCGTCAGTATCTGCGCAATGTCACACTGGCGGAGGGCAG
CAGCGTTGAGCAGGCGATTGTAGCCTCCGGCCTGCTGGAACTGCGTGGTGATATTGACCTGCAAAGTAACAAGGTGGGCA
TCTATAGCCGACCGGCCAAGTTGGCTGATGTGCTCAGCGATGGCGACCGGGTGGAAATTTATCGCCCACTGATTGCCGAC
CCCAAAGAGCTGCGCCGCCAACGGGCAGAGAAGGCAAAAAAATAA

Upstream 100 bases:

>100_bases
TTTACCAACAAATTGATCGAGTTGGCGTTCGGCAAGGTGTTTAAAGAGCTGGCGGGTAACATGGTGCAGGCATTCACCCA
GCGGGCGAAAGAGGTCTACA

Downstream 100 bases:

>100_bases
GGCGCTAAGAGCGCCTTATTTTTTATCAGAATTTTATCTTCCGAGTTGCAGCCTGGTACTGTCATGAAGAACTTGACGCG
TCCCTCACGGGCCGGACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSEIRVEVVYALPERQYLRNVTLAEGSSVEQAIVASGLLELRGDIDLQSNKVGIYSRPAKLADVLSDGDRVEIYRPLIAD
PKELRRQRAEKAKK

Sequences:

>Translated_94_residues
MSEIRVEVVYALPERQYLRNVTLAEGSSVEQAIVASGLLELRGDIDLQSNKVGIYSRPAKLADVLSDGDRVEIYRPLIAD
PKELRRQRAEKAKK
>Mature_93_residues
SEIRVEVVYALPERQYLRNVTLAEGSSVEQAIVASGLLELRGDIDLQSNKVGIYSRPAKLADVLSDGDRVEIYRPLIADP
KELRRQRAEKAKK

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family

Homologues:

Organism=Escherichia coli, GI87082139, Length=90, Percent_Identity=78.8888888888889, Blast_Score=143, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFH_SERP5 (A8GI44)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001479912.1
- ProteinModelPortal:   A8GI44
- SMR:   A8GI44
- STRING:   A8GI44
- GeneID:   5606973
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_3688
- eggNOG:   COG2914
- HOGENOM:   HBG700644
- OMA:   PKDVRRK
- BioCyc:   SPRO399741:SPRO_3688-MONOMER
- HAMAP:   MF_00460
- InterPro:   IPR005346

Pfam domain/function: PF03658 UPF0125

EC number: NA

Molecular weight: Translated: 10566; Mature: 10435

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIRVEVVYALPERQYLRNVTLAEGSSVEQAIVASGLLELRGDIDLQSNKVGIYSRPAK
CCCEEEEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHH
LADVLSDGDRVEIYRPLIADPKELRRQRAEKAKK
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEIRVEVVYALPERQYLRNVTLAEGSSVEQAIVASGLLELRGDIDLQSNKVGIYSRPAK
CCEEEEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHH
LADVLSDGDRVEIYRPLIADPKELRRQRAEKAKK
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA