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The map label for this gene is yihM [H]

Identifier: 157371816

GI number: 157371816

Start: 3956415

End: 3957392

Strand: Reverse

Name: yihM [H]

Synonym: Spro_3581

Alternate gene names: 157371816

Gene position: 3957392-3956415 (Counterclockwise)

Preceding gene: 157371817

Following gene: 157371815

Centisome position: 72.63

GC content: 52.76

Gene sequence:

>978_bases
ATGGATCGCTTAACGGCGGAGAAAGTTCTTCTGCGGGCGCAGAATTTGCCGCTTTATCTGCATGCCTACGCCTTTCATCT
CAATATGCGCATGGAGAAAATCCTGCCTGAGGATCTGCTGACCATTGCTCATCAGCAGCAACTGCGCGGCGTGAAAGTGC
ATGTATTGGATGGGGAAAGTCAGGCGCTTTGCCACGCCGATGATGCCCGCCTTCGCAACTTTGGTGAGCAGGCACAGCGC
TATGGGTTGGATATCCATATCGAAACCAGCGCTTCCGACTCGCAGACCATCGATCAGGCGGTGAACATTGCCCTTAAATC
CGGTGCCAGTTCGGTGCGCTTCTATCCGCGCTATCAGGGGGCATTGCAGCAAGTGTTGGCGCGCATTGCCGAAGATATTC
AGTACATCAAGCAGCGTTATCAGCACAGCGGTCTGAGCTTTACTTTGGAGCAGCACGAGGATCTTAAAAGTCATGAACTG
GTTAGCCTGGTTCAGGCGGCTGATTTCCCGCAGCTTTCCCTGTTATTTGATTTCGCCAACATGATCAACGCCAATGAAGA
GCCGCTGACGGCATTGGCGGTAATGGCTGAAGATATCACCCAGGTACATATCAAGGACGCACTGATTGTGCGTGAAGACC
AGGGAATGGGGCACCGGGCCTGTATTTCCGGGCAGGGGGATTTGCCCTTCCGGGAATTGTTGCTGGGGCTAATTTGCCTG
GGCGAAGAGCGGCCGCAGGTTACCGCTTATGGGCTGGAAGAAGAGGTGGATTATTACGCGCCGCCATTTCGTTTTAACGG
AGAGGACGATAACCCGCATATTCCATGGCGGGAGATGAGTGAAACCGCGTTACCGGAACATGGGCTGGAGGAACGGCTTA
AAAAAGAGGTTCAGGATGCATTAAATCAAATTAACCATGTTCGCACCATTACTGACAGTTTGATAAAGCAAGCCCGGGAG
CTGCTAACCCCGGCATAA

Upstream 100 bases:

>100_bases
GAAGCATCGTGCCGATGCCCAGCGCCGTATCGTGCAGGTGGATATCGAATACTGGCGCTTCGAGTCGGTGGATTTTTTCA
TTAACTTATAGGTGAACACC

Downstream 100 bases:

>100_bases
TATAATAAATAAATTTATAAATAACACATTCTCAATGATGTGGAGAAACACTCGTCCCGTCACTGAGGTAACAACACCGC
TTATTATCTAATGGCTGTGA

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MDRLTAEKVLLRAQNLPLYLHAYAFHLNMRMEKILPEDLLTIAHQQQLRGVKVHVLDGESQALCHADDARLRNFGEQAQR
YGLDIHIETSASDSQTIDQAVNIALKSGASSVRFYPRYQGALQQVLARIAEDIQYIKQRYQHSGLSFTLEQHEDLKSHEL
VSLVQAADFPQLSLLFDFANMINANEEPLTALAVMAEDITQVHIKDALIVREDQGMGHRACISGQGDLPFRELLLGLICL
GEERPQVTAYGLEEEVDYYAPPFRFNGEDDNPHIPWREMSETALPEHGLEERLKKEVQDALNQINHVRTITDSLIKQARE
LLTPA

Sequences:

>Translated_325_residues
MDRLTAEKVLLRAQNLPLYLHAYAFHLNMRMEKILPEDLLTIAHQQQLRGVKVHVLDGESQALCHADDARLRNFGEQAQR
YGLDIHIETSASDSQTIDQAVNIALKSGASSVRFYPRYQGALQQVLARIAEDIQYIKQRYQHSGLSFTLEQHEDLKSHEL
VSLVQAADFPQLSLLFDFANMINANEEPLTALAVMAEDITQVHIKDALIVREDQGMGHRACISGQGDLPFRELLLGLICL
GEERPQVTAYGLEEEVDYYAPPFRFNGEDDNPHIPWREMSETALPEHGLEERLKKEVQDALNQINHVRTITDSLIKQARE
LLTPA
>Mature_325_residues
MDRLTAEKVLLRAQNLPLYLHAYAFHLNMRMEKILPEDLLTIAHQQQLRGVKVHVLDGESQALCHADDARLRNFGEQAQR
YGLDIHIETSASDSQTIDQAVNIALKSGASSVRFYPRYQGALQQVLARIAEDIQYIKQRYQHSGLSFTLEQHEDLKSHEL
VSLVQAADFPQLSLLFDFANMINANEEPLTALAVMAEDITQVHIKDALIVREDQGMGHRACISGQGDLPFRELLLGLICL
GEERPQVTAYGLEEEVDYYAPPFRFNGEDDNPHIPWREMSETALPEHGLEERLKKEVQDALNQINHVRTITDSLIKQARE
LLTPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790305, Length=320, Percent_Identity=66.5625, Blast_Score=442, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 36852; Mature: 36852

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLTAEKVLLRAQNLPLYLHAYAFHLNMRMEKILPEDLLTIAHQQQLRGVKVHVLDGES
CCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEEECCCC
QALCHADDARLRNFGEQAQRYGLDIHIETSASDSQTIDQAVNIALKSGASSVRFYPRYQG
CCEECCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECHHHHH
ALQQVLARIAEDIQYIKQRYQHSGLSFTLEQHEDLKSHELVSLVQAADFPQLSLLFDFAN
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHH
MINANEEPLTALAVMAEDITQVHIKDALIVREDQGMGHRACISGQGDLPFRELLLGLICL
HHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHC
GEERPQVTAYGLEEEVDYYAPPFRFNGEDDNPHIPWREMSETALPEHGLEERLKKEVQDA
CCCCCCEEEECCHHHHHHCCCCCEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH
LNQINHVRTITDSLIKQARELLTPA
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDRLTAEKVLLRAQNLPLYLHAYAFHLNMRMEKILPEDLLTIAHQQQLRGVKVHVLDGES
CCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEEECCCC
QALCHADDARLRNFGEQAQRYGLDIHIETSASDSQTIDQAVNIALKSGASSVRFYPRYQG
CCEECCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECHHHHH
ALQQVLARIAEDIQYIKQRYQHSGLSFTLEQHEDLKSHELVSLVQAADFPQLSLLFDFAN
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHH
MINANEEPLTALAVMAEDITQVHIKDALIVREDQGMGHRACISGQGDLPFRELLLGLICL
HHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHC
GEERPQVTAYGLEEEVDYYAPPFRFNGEDDNPHIPWREMSETALPEHGLEERLKKEVQDA
CCCCCCEEEECCHHHHHHCCCCCEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH
LNQINHVRTITDSLIKQARELLTPA
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]